Guide to the Human Genome
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Name: SENP5 Sequence: fasta or formatted (755aa) NCBI GI: 159032029
Description:

SUMO1/sentrin specific peptidase 5

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         26           1
 C cysteine            3.0         23           2
 D aspartate           5.2         39           2
 E glutamate           5.8         44           2
 F phenylalanine       5.0         38           2
 G glycine             5.6         42           3
 H histidine           3.4         26           2
 I isoleucine          4.0         30           2
 K lysine              9.3         70           2
 L leucine             9.0         68           3
 M methionine          2.1         16           2
 N asparagine          5.0         38           2
 P proline             4.9         37           1
 Q glutamine           5.8         44           2
 R arginine            5.8         44           2
 S serine              9.1         69           3
 T threonine           4.2         32           1
 V valine              5.4         41           2
 W tryptophan          1.5         11           1
 Y tyrosine            2.3         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SUMO1/sentrin specific peptidase 5 
SENP3                 0.183   SUMO1/sentrin/SMT3 specific protease 3 
SENP1                 0.087   sentrin/SUMO-specific protease 1 
SENP2                 0.077   SUMO1/sentrin/SMT3 specific protease 2 
SENP7                 0.022   sentrin/SUMO-specific protease 7 isoform 2 
SENP7                 0.022   sentrin/SUMO-specific protease 7 isoform 1 
SENP6                 0.019   SUMO1/sentrin specific peptidase 6 isoform 2 
SENP6                 0.019   SUMO1/sentrin specific peptidase 6 isoform 1 
SENP8                 0.013   SUMO/sentrin specific peptidase family member 8 [Hom...
ZFYVE20               0.008   FYVE-finger-containing Rab5 effector protein rabenos...
JMJD1C                0.007   jumonji domain containing 1C isoform a 
JMJD1C                0.007   jumonji domain containing 1C isoform b 
LRRC7                 0.007   leucine rich repeat containing 7 
LOC100170229          0.006   hypothetical protein LOC100170229 
SOX10                 0.005   SRY (sex determining region Y)-box 10 
MUC2                  0.005   mucin 2 precursor 
LOC100294420          0.005   PREDICTED: similar to mucin 2 
LRIG1                 0.005   leucine-rich repeats and immunoglobulin-like domains...
AKAP9                 0.004   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.004   A-kinase anchor protein 9 isoform 3 
CDKN2AIP              0.004   CDKN2A interacting protein 
AFF3                  0.004   AF4/FMR2 family, member 3 isoform 2 
AFF3                  0.004   AF4/FMR2 family, member 3 isoform 1 
TTC14                 0.004   tetratricopeptide repeat domain 14 isoform a 
ASXL3                 0.004   additional sex combs like 3 
CSRP1                 0.003   cysteine and glycine-rich protein 1 isoform 2 [Homo...
KIAA1026              0.003   kazrin isoform E 
KIAA1026              0.003   kazrin isoform C 
KIAA1026              0.003   kazrin isoform B 
KIAA1026              0.003   kazrin isoform C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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