Guide to the Human Genome
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Name: SENP2 Sequence: fasta or formatted (589aa) NCBI GI: 54607091
Description:

SUMO1/sentrin/SMT3 specific protease 2

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.4         14           2
 C cysteine            2.4         14           1
 D aspartate           4.1         24           2
 E glutamate           7.3         43           2
 F phenylalanine       3.6         21           2
 G glycine             6.8         40           2
 H histidine           2.9         17           2
 I isoleucine          4.4         26           2
 K lysine              7.8         46           2
 L leucine             9.8         58           2
 M methionine          2.4         14           1
 N asparagine          4.8         28           2
 P proline             4.6         27           2
 Q glutamine           4.4         26           2
 R arginine            8.3         49           3
 S serine              8.7         51           3
 T threonine           5.9         35           2
 V valine              5.3         31           2
 W tryptophan          1.5          9           1
 Y tyrosine            2.7         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SUMO1/sentrin/SMT3 specific protease 2 
SENP1                 0.227   sentrin/SUMO-specific protease 1 
SENP3                 0.103   SUMO1/sentrin/SMT3 specific protease 3 
SENP5                 0.100   SUMO1/sentrin specific peptidase 5 
SENP6                 0.037   SUMO1/sentrin specific peptidase 6 isoform 2 
SENP6                 0.037   SUMO1/sentrin specific peptidase 6 isoform 1 
SENP7                 0.032   sentrin/SUMO-specific protease 7 isoform 2 
SENP7                 0.032   sentrin/SUMO-specific protease 7 isoform 1 
PDZD2                 0.007   PDZ domain containing 2 
BOD1L                 0.006   biorientation of chromosomes in cell division 1-like...
FUBP3                 0.006   far upstream element (FUSE) binding protein 3 [Homo...
APOF                  0.006   apolipoprotein F precursor 
SNX29                 0.006   sorting nexin 29 
PPP1R12A              0.005   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.005   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.005   protein phosphatase 1, regulatory (inhibitor) subunit...
CTAGE6                0.005   CTAGE family, member 6 
LOC65998              0.005   hypothetical protein LOC65998 
TTN                   0.004   titin isoform N2-A 
TTN                   0.004   titin isoform novex-2 
TTN                   0.004   titin isoform novex-1 
TTN                   0.004   titin isoform N2-B 
CEP152                0.004   centrosomal protein 152kDa 
CTAGE4                0.004   CTAGE family, member 4 
RRP12                 0.004   ribosomal RNA processing 12 homolog isoform 2 [Homo...
RRP12                 0.004   ribosomal RNA processing 12 homolog isoform 1 [Homo...
SPTAN1                0.004   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
SPTAN1                0.004   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
CCT5                  0.004   chaperonin containing TCP1, subunit 5 (epsilon) [Hom...
JAKMIP1               0.004   janus kinase and microtubule interacting protein 1 i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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