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Search of human proteins with 15826862
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo
sapiens]
(630 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo sa... 1286 0.0
gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo s... 1273 0.0
gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo s... 1254 0.0
gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo s... 1241 0.0
gi|150010540 FERM domain containing 4B [Homo sapiens] 142 1e-33
gi|116063562 FERM domain containing 4A [Homo sapiens] 127 3e-29
gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens] 96 1e-19
gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens] 96 1e-19
gi|163965366 nascent polypeptide-associated complex alpha subuni... 75 2e-13
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 65 1e-10
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 65 1e-10
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 61 4e-09
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 58 3e-08
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 58 3e-08
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 58 3e-08
gi|110832843 TBP-associated factor 4 [Homo sapiens] 56 9e-08
gi|160707881 formin 2 [Homo sapiens] 55 2e-07
gi|145309324 FH2 domain containing 1 [Homo sapiens] 54 3e-07
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 53 7e-07
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 52 1e-06
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 52 2e-06
gi|40353727 synaptopodin isoform A [Homo sapiens] 52 2e-06
gi|33286436 gametogenetin [Homo sapiens] 51 3e-06
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 50 6e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 50 8e-06
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 49 1e-05
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 49 1e-05
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 48 3e-05
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 47 5e-05
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 47 7e-05
>gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo
sapiens]
Length = 630
Score = 1286 bits (3327), Expect = 0.0
Identities = 630/630 (100%), Positives = 630/630 (100%)
Query: 1 MEVKGQLISSPTFNAPAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQE 60
MEVKGQLISSPTFNAPAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQE
Sbjct: 1 MEVKGQLISSPTFNAPAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQE 60
Query: 61 AELTGQLPPECPLEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVS 120
AELTGQLPPECPLEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVS
Sbjct: 61 AELTGQLPPECPLEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVS 120
Query: 121 VQQQIAAAARRLALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQ 180
VQQQIAAAARRLALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQ
Sbjct: 121 VQQQIAAAARRLALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQ 180
Query: 181 PLPLSTGSVITTQGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERP 240
PLPLSTGSVITTQGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERP
Sbjct: 181 PLPLSTGSVITTQGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERP 240
Query: 241 SPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEG 300
SPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEG
Sbjct: 241 SPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEG 300
Query: 301 RSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNS 360
RSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNS
Sbjct: 301 RSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNS 360
Query: 361 SEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRA 420
SEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRA
Sbjct: 361 SEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRA 420
Query: 421 ARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDG 480
ARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDG
Sbjct: 421 ARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDG 480
Query: 481 LLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPT 540
LLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPT
Sbjct: 481 LLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPT 540
Query: 541 RIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQA 600
RIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQA
Sbjct: 541 RIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQA 600
Query: 601 LYGAPSQAPLPHSRSFTAPPVSGRYGGCFY 630
LYGAPSQAPLPHSRSFTAPPVSGRYGGCFY
Sbjct: 601 LYGAPSQAPLPHSRSFTAPPVSGRYGGCFY 630
>gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo
sapiens]
Length = 661
Score = 1273 bits (3293), Expect = 0.0
Identities = 625/625 (100%), Positives = 625/625 (100%)
Query: 1 MEVKGQLISSPTFNAPAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQE 60
MEVKGQLISSPTFNAPAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQE
Sbjct: 1 MEVKGQLISSPTFNAPAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQE 60
Query: 61 AELTGQLPPECPLEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVS 120
AELTGQLPPECPLEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVS
Sbjct: 61 AELTGQLPPECPLEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVS 120
Query: 121 VQQQIAAAARRLALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQ 180
VQQQIAAAARRLALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQ
Sbjct: 121 VQQQIAAAARRLALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQ 180
Query: 181 PLPLSTGSVITTQGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERP 240
PLPLSTGSVITTQGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERP
Sbjct: 181 PLPLSTGSVITTQGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERP 240
Query: 241 SPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEG 300
SPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEG
Sbjct: 241 SPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEG 300
Query: 301 RSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNS 360
RSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNS
Sbjct: 301 RSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNS 360
Query: 361 SEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRA 420
SEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRA
Sbjct: 361 SEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRA 420
Query: 421 ARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDG 480
ARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDG
Sbjct: 421 ARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDG 480
Query: 481 LLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPT 540
LLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPT
Sbjct: 481 LLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPT 540
Query: 541 RIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQA 600
RIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQA
Sbjct: 541 RIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQA 600
Query: 601 LYGAPSQAPLPHSRSFTAPPVSGRY 625
LYGAPSQAPLPHSRSFTAPPVSGRY
Sbjct: 601 LYGAPSQAPLPHSRSFTAPPVSGRY 625
>gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo
sapiens]
Length = 618
Score = 1254 bits (3246), Expect = 0.0
Identities = 614/614 (100%), Positives = 614/614 (100%)
Query: 17 AALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPG 76
AALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPG
Sbjct: 5 AALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPG 64
Query: 77 ERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAP 136
ERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAP
Sbjct: 65 ERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAP 124
Query: 137 DLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITTQGVC 196
DLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITTQGVC
Sbjct: 125 DLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITTQGVC 184
Query: 197 LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGS 256
LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGS
Sbjct: 185 LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGS 244
Query: 257 PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQ 316
PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQ
Sbjct: 245 PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQ 304
Query: 317 LCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGS 376
LCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGS
Sbjct: 305 LCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGS 364
Query: 377 PPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRL 436
PPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRL
Sbjct: 365 PPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRL 424
Query: 437 PPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADS 496
PPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADS
Sbjct: 425 PPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADS 484
Query: 497 NSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLAL 556
NSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLAL
Sbjct: 485 NSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLAL 544
Query: 557 EGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSF 616
EGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSF
Sbjct: 545 EGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSF 604
Query: 617 TAPPVSGRYGGCFY 630
TAPPVSGRYGGCFY
Sbjct: 605 TAPPVSGRYGGCFY 618
>gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo
sapiens]
Length = 649
Score = 1241 bits (3212), Expect = 0.0
Identities = 609/609 (100%), Positives = 609/609 (100%)
Query: 17 AALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPG 76
AALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPG
Sbjct: 5 AALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPG 64
Query: 77 ERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAP 136
ERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAP
Sbjct: 65 ERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAP 124
Query: 137 DLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITTQGVC 196
DLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITTQGVC
Sbjct: 125 DLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITTQGVC 184
Query: 197 LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGS 256
LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGS
Sbjct: 185 LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGS 244
Query: 257 PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQ 316
PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQ
Sbjct: 245 PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQ 304
Query: 317 LCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGS 376
LCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGS
Sbjct: 305 LCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGS 364
Query: 377 PPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRL 436
PPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRL
Sbjct: 365 PPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRL 424
Query: 437 PPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADS 496
PPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADS
Sbjct: 425 PPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADS 484
Query: 497 NSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLAL 556
NSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLAL
Sbjct: 485 NSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLAL 544
Query: 557 EGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSF 616
EGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSF
Sbjct: 545 EGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSF 604
Query: 617 TAPPVSGRY 625
TAPPVSGRY
Sbjct: 605 TAPPVSGRY 613
>gi|150010540 FERM domain containing 4B [Homo sapiens]
Length = 1034
Score = 142 bits (357), Expect = 1e-33
Identities = 121/368 (32%), Positives = 189/368 (51%), Gaps = 47/368 (12%)
Query: 1 MEVKGQLISSPTFNAPAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQE 60
M G LISS + ++ E + + K E++ L +++ LQE L K++EL+K+CL+E
Sbjct: 402 MASNGSLISSGSQDS------EVSEEQKREKILELKKKEKLLQEKLLKKVEELKKICLRE 455
Query: 61 AELTGQLPPECPLEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEE-LALEALEREV 119
AELTG++P E PL GE+P VRRR TA + +L P+EE AL+ LE
Sbjct: 456 AELTGKMPKEYPLNIGEKPPQVRRRVGTA--------FKLDDNLLPSEEDPALQELESNF 507
Query: 120 SVQQQIAAAARRLALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLP 179
+QQ++ AA++LA PDL +++R+Q DA+++L E+E + + R R G
Sbjct: 508 LIQQKLVEAAKKLANEPDLCKTVKKKRKQDYTDAMKKLQEIENAINEYRIRCGKKPSQKA 567
Query: 180 QPLPLSTGSVITTQGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAER 239
LP ED++ SESSSLS++ ++D+ F
Sbjct: 568 TVLP-----------------------EDII-PSESSSLSDT-TTYDDPSDAFTFPGQRS 602
Query: 240 PSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFE 299
S P + L S G ER K ++ + D + R +++ +SP ++L R
Sbjct: 603 SSVPHSPRILPPKSLGI-ERIHFRKSSINEQFVDTRQSREMLSTHSSPYKTLERRPQG-- 659
Query: 300 GRSVPATPVLTRGA-GPQLCKPE--GLHSRQWSGSQDSQMGFPRADPASDRASLFVARTR 356
GRS+P TPVLTR A +PE H RQ SGS +SQ ++ SD+ +++++
Sbjct: 660 GRSMPTTPVLTRNAYSSSHLEPESSSQHCRQRSGSLESQSHL-LSEMDSDKPFFSLSKSQ 718
Query: 357 RSNSSEAL 364
RS+S+E L
Sbjct: 719 RSSSTEIL 726
>gi|116063562 FERM domain containing 4A [Homo sapiens]
Length = 1039
Score = 127 bits (319), Expect = 3e-29
Identities = 118/406 (29%), Positives = 178/406 (43%), Gaps = 58/406 (14%)
Query: 1 MEVKGQLIS--SPTFNAPAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCL 58
M KG++IS S + + + +++ K + L L RQ L+E L +L+EL+K+CL
Sbjct: 355 MGSKGKIISGSSGSLLSSGSQESDSSQSAKKDMLAALKSRQEALEETLRQRLEELKKLCL 414
Query: 59 QEAELTGQLPPECPLEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALERE 118
+EAELTG+LP E PL+PGE P +VRRR TA L EE LE LERE
Sbjct: 415 REAELTGKLPVEYPLDPGEEPPIVRRRIGTA------FKLDEQKILPKGEEAELERLERE 468
Query: 119 VSVQQQIAAAARRLALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPL 178
++Q QI AARRLA P++S + +++R+ +AL++L E+E + + R + G
Sbjct: 469 FAIQSQITEAARRLASDPNVSKKLKKQRKTSYLNALKKLQEIENAINENRIKSGKKPTQR 528
Query: 179 PQPLPLSTGSVIT-----TQGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGC 233
L + G++ + + + L +Q++ LHS L SH+ P
Sbjct: 529 AS-LIIDDGNIASEDSSLSDALVLEDEDSQVTSTISPLHSPHKGLPPRPPSHNRPPPPQS 587
Query: 234 F-----------SLAERPSPPKAWDQ------------LRAVSGGSPERRTPWKPPPSDL 270
+ P PK W + + S S +R P ++
Sbjct: 588 LEGLRQMHYHRNDYDKSPIKPKMWSESSLDEPYEKVKKRSSHSHSSSHKRFPSTGSCAEA 647
Query: 271 YGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVL----------TRGA--GPQLC 318
G S +N SP R LP S S+P+TP L TR P
Sbjct: 648 GGGSNSLQN------SPIRGLPHWNSQ---SSMPSTPDLRVRSPHYVHSTRSVDISPTRL 698
Query: 319 KPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEAL 364
LH R S S +SQ ++ + + RTR SN S+ +
Sbjct: 699 HSLALHFRHRSSSLESQGKLLGSENDTGSPDFYTPRTRSSNGSDPM 744
>gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens]
Length = 578
Score = 95.9 bits (237), Expect = 1e-19
Identities = 84/269 (31%), Positives = 125/269 (46%), Gaps = 41/269 (15%)
Query: 38 RQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPGERPQLVRRRPPTARAYPPPHP 97
+QR L+ L L+ELR++CL+EAELTG LP E PL+PGE+ VRRR A
Sbjct: 37 QQRALEARLEACLEELRRLCLREAELTGTLPAEYPLKPGEKAPKVRRRIGAAYKL----D 92
Query: 98 NQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAPDLSTEQRRRRRQVQADALRRL 157
+ A H E L +LER++++Q QI AARRL L +LS + RR+R+ ++L
Sbjct: 93 DWALH-----REDPLSSLERQLALQLQITEAARRLCLEENLSRQARRQRKHSMLQEEKKL 147
Query: 158 HELEEQLRDVRARLGLP---VLPLPQPLPLSTGSVITTQGVCLGMRLAQLSQEDVVLHSE 214
EL+ L + R P LPL + L S S ++ + ++L E
Sbjct: 148 QELQRCLVERRRNSEPPPAAALPLGRELSASDDSSLS---------------DGLLLEEE 192
Query: 215 SSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAV--SGGSPER----RTPWKPPPS 268
S + + P + RP PP+ + L+ GSPER +PWK
Sbjct: 193 ESQVP--------KPPPESPAPPSRPLPPQTLEGLQPTGPEAGSPERAPVQNSPWKETSL 244
Query: 269 DLYGDLKSRRNSVASPTSPTRSLPRSASS 297
D + + + S +S + P+ S
Sbjct: 245 DHPYEKPRKSSEPWSESSSPATTPQDGPS 273
>gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens]
Length = 663
Score = 95.9 bits (237), Expect = 1e-19
Identities = 84/269 (31%), Positives = 125/269 (46%), Gaps = 41/269 (15%)
Query: 38 RQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPGERPQLVRRRPPTARAYPPPHP 97
+QR L+ L L+ELR++CL+EAELTG LP E PL+PGE+ VRRR A
Sbjct: 122 QQRALEARLEACLEELRRLCLREAELTGTLPAEYPLKPGEKAPKVRRRIGAAYKL----D 177
Query: 98 NQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAPDLSTEQRRRRRQVQADALRRL 157
+ A H E L +LER++++Q QI AARRL L +LS + RR+R+ ++L
Sbjct: 178 DWALH-----REDPLSSLERQLALQLQITEAARRLCLEENLSRQARRQRKHSMLQEEKKL 232
Query: 158 HELEEQLRDVRARLGLP---VLPLPQPLPLSTGSVITTQGVCLGMRLAQLSQEDVVLHSE 214
EL+ L + R P LPL + L S S ++ + ++L E
Sbjct: 233 QELQRCLVERRRNSEPPPAAALPLGRELSASDDSSLS---------------DGLLLEEE 277
Query: 215 SSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAV--SGGSPER----RTPWKPPPS 268
S + + P + RP PP+ + L+ GSPER +PWK
Sbjct: 278 ESQVP--------KPPPESPAPPSRPLPPQTLEGLQPTGPEAGSPERAPVQNSPWKETSL 329
Query: 269 DLYGDLKSRRNSVASPTSPTRSLPRSASS 297
D + + + S +S + P+ S
Sbjct: 330 DHPYEKPRKSSEPWSESSSPATTPQDGPS 358
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 74.7 bits (182), Expect = 2e-13
Identities = 111/409 (27%), Positives = 145/409 (35%), Gaps = 64/409 (15%)
Query: 220 ESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPP---PSDLYGDLKS 276
+SGAS LA+ PSP VS +R P K P G+L
Sbjct: 774 DSGASATASSKGTLTYLADSPSP-------LGVSVSPQTKRPPTKKGSAGPDTPIGNL-- 824
Query: 277 RRNSVASPTSPTRS--LPRSASSFEG-RSVPAT-----PVLTRGAGPQLC----KPEG-- 322
+SP SP + LP ++ SF+G + PAT P +GA P+G
Sbjct: 825 -----SSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVT 879
Query: 323 LHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGG--------GA 374
L ++ + FP+ PA+ A + S+S + A G GA
Sbjct: 880 LPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGA 939
Query: 375 GSPPAPLAPSASGPPVCKSSEVLYERPQPTP------AFSSRTAGPPDPPRAARPS---- 424
+PPA PS G P S + P TP + G P PP A PS
Sbjct: 940 PTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGG 999
Query: 425 SAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTM 484
A P+ +GAP P V +G P + PPAA P P + T
Sbjct: 1000 PATPSPKGAPTPPAVTP------PSPKGSPAATPFPKGASTPPAATPPSP--KGSPAATP 1051
Query: 485 LP-GPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIP 543
LP G P AA SP P + T P PP GP P+P PP P
Sbjct: 1052 LPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPAT-PSPKGAPMPPAATP 1110
Query: 544 SAGE----RSGHKNLALEGLRDWYIRNSGLAAGPQR-RPVLPSVGPPHP 587
+ + HK GLA P + P P+ PP P
Sbjct: 1111 PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSP 1159
Score = 54.7 bits (130), Expect = 3e-07
Identities = 87/346 (25%), Positives = 117/346 (33%), Gaps = 60/346 (17%)
Query: 255 GSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAG 314
GSP K P+ L S + A+P+ P +A+ + PATP
Sbjct: 1045 GSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPM 1104
Query: 315 PQLCKPE----GLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAA 370
P P GL + G+ + P A P S + L + + ++ A
Sbjct: 1105 PPAATPPSPKGGLATPPHKGAPTT----PAATPPSPKGGLATPPPKGAPTTPAATPPSPK 1160
Query: 371 GGGAGSPP--APLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAP 428
GG A PP AP P+A+ PP K P P A ++ A PP P + A P
Sbjct: 1161 GGLATPPPKGAPTTPAAT-PPSPKGG---LATPSPKGAPTTPAATPPSP----KGGLATP 1212
Query: 429 ASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLP-G 487
+ +GAP PAA P P + GL T P G
Sbjct: 1213 SPKGAP------------------------------TTPAATPPSP---KGGLATPSPKG 1239
Query: 488 PPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEG-----PEVHPNPLLWMPP-PTR 541
P AA SP P + T P PP G + PNP + PP P
Sbjct: 1240 APTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKG 1299
Query: 542 IPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHP 587
P+ G + S P+ P P+V PP P
Sbjct: 1300 GPATSPPKGAP--TPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSP 1343
Score = 43.9 bits (102), Expect = 5e-04
Identities = 81/352 (23%), Positives = 121/352 (34%), Gaps = 62/352 (17%)
Query: 241 SPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSP--TRSLPRSASSF 298
SPPK A + SP + +P PPP + +P SP T +LP + S
Sbjct: 1304 SPPKGAPTPPAATPPSP-KGSPGTPPPKG------APTPPAVTPPSPKGTPTLPATTPSS 1356
Query: 299 EGRSVPATPVLTRGAGPQLCKPE---GLHSRQWSGSQDSQMGFPRADPASDRASLFVART 355
+G P TP G P P G S + + P+ DP S + +
Sbjct: 1357 KGG--PTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAV---IPLS 1411
Query: 356 RRSNSSEALLVDRAAGGGAG--SPPA------------------PLAPSASGPPVCKSSE 395
+ + + + AA G +PPA P PS+ G P +
Sbjct: 1412 PKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVT 1471
Query: 396 VLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSL---DRG 452
+ P P + ++ P P A PA GAP LP V + R
Sbjct: 1472 PPSPKEPPAPKQVATSSSPKKAP-------ATPAPMGAPTLPAVIPSSPKEVPATPSSRR 1524
Query: 453 LPRSGGGTGWGE------------LPPAAEVPGPLSRRDGLLTMLPGPPPVYAADSNSPL 500
P + T + +PPA VP P + + T P + +++SP
Sbjct: 1525 DPIAPTATLLSKKTPATLAPKEALIPPAMTVPSP-KKTPAIPTPKEAPATPSSKEASSPP 1583
Query: 501 LRTKDPHTRATRTKPCGLPPE-AAEGPEVHPNPLLWMPP-PTRIPSAGERSG 550
T + A K +PP + P+ P P PP P + P+ G
Sbjct: 1584 AVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKG 1635
Score = 43.9 bits (102), Expect = 5e-04
Identities = 77/326 (23%), Positives = 117/326 (35%), Gaps = 49/326 (15%)
Query: 237 AERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSAS 296
A P PK + V+ S ++ P P P + + P+SP + +P + S
Sbjct: 1469 AVTPPSPKEPPAPKQVATSSSPKKAPATPAP------MGAPTLPAVIPSSP-KEVPATPS 1521
Query: 297 SFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTR 356
S P +L++ L E L + + P+ PA A
Sbjct: 1522 SRRDPIAPTATLLSKKTPATLAPKEALIPPAMT------VPSPKKTPAIPTPKEAPATPS 1575
Query: 357 RSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPD 416
+S V + GA SP L P A P K + PTP PP
Sbjct: 1576 SKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEA--------PTPP----AVTPPS 1623
Query: 417 PPRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAE----VP 472
P + A PA +G P PPV L D P S +P A++
Sbjct: 1624 PEKGP----ATPAPKGTPTSPPVTPSSLKDSPTS---PASVTCKMGATVPQASKGLPAKK 1676
Query: 473 GPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHT-RATRTKPCGLPPEAA----EGP- 526
GP + ++ L+ P P+ A + K P T +++ T P P +A +GP
Sbjct: 1677 GPTALKEVLVAPAPESTPIITAPTR------KGPQTKKSSATSPPICPDPSAKNGSKGPL 1730
Query: 527 -EVHPNPLLWMPPPTRIPSAGERSGH 551
V P PLL + + + G+ + H
Sbjct: 1731 STVAPAPLLPVQKDSSKTAKGKDASH 1756
Score = 42.0 bits (97), Expect = 0.002
Identities = 79/347 (22%), Positives = 106/347 (30%), Gaps = 65/347 (18%)
Query: 261 TPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKP 320
TP PPS G + + +PT+P + P S P P
Sbjct: 1174 TPAATPPSPKGG--LATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPS--PK 1229
Query: 321 EGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGG-------G 373
GL + G+ + P A P S + + + + A GG G
Sbjct: 1230 GGLATPSPKGAPTT----PAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKG 1285
Query: 374 AGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPAS-RG 432
A +P PS G P + P TP + G P P A P + P S +G
Sbjct: 1286 APNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKG 1345
Query: 433 APRLPPVCGDFLLDYSLDRGLPRSGGG-----TGWGELPPAA-------EVPGPLSRRDG 480
P LP P S GG + G PPAA P S + G
Sbjct: 1346 TPTLPAT-------------TPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRG 1392
Query: 481 LLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPT 540
+P P + + PL K P T TR + P + P L P T
Sbjct: 1393 --PAIPSPKGDPTSPAVIPLSPKKAPATPVTR-EGAATPSKGDLTPPAVTPVSLKKAPAT 1449
Query: 541 RIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHP 587
P G + + P LP+V PP P
Sbjct: 1450 SAPKGGPAT---------------------PSSKGDPTLPAVTPPSP 1475
Score = 33.9 bits (76), Expect = 0.47
Identities = 63/252 (25%), Positives = 89/252 (35%), Gaps = 31/252 (12%)
Query: 361 SEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRA 420
S AL V A G + P P +P+ P C S P P+P+ + T P + P
Sbjct: 29 SSALSVTAALGQPGPTLPPPCSPA---PQQCPLSAANQASPFPSPSTIAST--PLEVPFP 83
Query: 421 ARPSSAAPASRGAPR----LPPVCGDFLLDYSLDRGLPRSGG---GTGWGELPPAAEVPG 473
S A AP LP + G + +L P GT P A
Sbjct: 84 QSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSAPLALVALA 143
Query: 474 PLSRRDGLL---TMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHP 530
P S + +L PP V A+S S + + +T +P E P+ P
Sbjct: 144 PHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKGTP 203
Query: 531 NP---LLWMPPPTRIPSAGERSGHKNL-----------ALEGLRDWYIRNSGLAAGPQRR 576
+P + +P P A +SG +L A ++D I S + PQ
Sbjct: 204 SPPCIVSTVPYHCVTPMASIQSGVASLPQTTPTTTLAIASPQVKDTTI--SSVLISPQNP 261
Query: 577 PVLPSVGPPHPP 588
L GP PP
Sbjct: 262 GSLSLKGPVSPP 273
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 65.5 bits (158), Expect = 1e-10
Identities = 100/365 (27%), Positives = 136/365 (37%), Gaps = 46/365 (12%)
Query: 211 LHSESSSLSESGASHDNEEPHGCFSLAERP-SPPKAWDQLRAVS----GGSPERRTPWKP 265
L S ++ ++SG S P G S + +P SPP + S G PE + P
Sbjct: 111 LRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMP 170
Query: 266 PPSDLYGDLKSRRNSVASPTSPTRSLPRSA-SSFEGRSVPATPVLTRGAGPQLCKPE--G 322
PP D+ S+ +S+ P T PR SS R P P R P P G
Sbjct: 171 PPRP---DVGSKPDSIPPPVPST---PRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPG 224
Query: 323 LHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEAL----LVDRAAGGGAGSPP 378
G Q + P S+R L +R + + +R + PP
Sbjct: 225 NRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPP 284
Query: 379 APLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG---APR 435
P P + PPV + P P+ SS+ PP PP P P+S G PR
Sbjct: 285 PP--PQNNKPPVPST---------PRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPR 333
Query: 436 LPPVCGDFLLDYSLDRGLP--RSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYA 493
LP + SL P S G +G PP+ P P+ G LP PPPV
Sbjct: 334 LPQ------RNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSR 387
Query: 494 ADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPN-PLLWMPPPTRIPSAGERSGHK 552
S S L P T ++ P + P + P+ P PPP PS R+G +
Sbjct: 388 NGSTSRAL----PATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPP-PSTSIRNGFQ 442
Query: 553 NLALE 557
+ E
Sbjct: 443 DSPCE 447
Score = 34.7 bits (78), Expect = 0.27
Identities = 54/198 (27%), Positives = 71/198 (35%), Gaps = 24/198 (12%)
Query: 257 PERRTPWKPPPSDLYGD----LKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRG 312
P R P PPS D L R S++S T P S GRS P P +
Sbjct: 313 PSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPS--------PGRSGPLPPPPSER 364
Query: 313 AGPQLCKPEGLHSRQWSGSQDSQMGFP-RADPASDRA-SLFVARTRRSNSSEALLVDRAA 370
P + P G S+ G RA PA+ + S + RS L DR +
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPS 424
Query: 371 GGGAGSPPAPLAPSASG--PPVCKSS-------EVLYERPQPTPAFSSRTAGPPDPPRAA 421
G A PP P +G C+ + + P P P + + P R
Sbjct: 425 AG-APPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLPPPEPYVQTTKSYPSKLARNE 483
Query: 422 RPSSAAPASRGAPRLPPV 439
S + RGAP LPP+
Sbjct: 484 SRSGSNRRERGAPPLPPI 501
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 65.5 bits (158), Expect = 1e-10
Identities = 100/365 (27%), Positives = 136/365 (37%), Gaps = 46/365 (12%)
Query: 211 LHSESSSLSESGASHDNEEPHGCFSLAERP-SPPKAWDQLRAVS----GGSPERRTPWKP 265
L S ++ ++SG S P G S + +P SPP + S G PE + P
Sbjct: 111 LRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMP 170
Query: 266 PPSDLYGDLKSRRNSVASPTSPTRSLPRSA-SSFEGRSVPATPVLTRGAGPQLCKPE--G 322
PP D+ S+ +S+ P T PR SS R P P R P P G
Sbjct: 171 PPRP---DVGSKPDSIPPPVPST---PRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPG 224
Query: 323 LHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEAL----LVDRAAGGGAGSPP 378
G Q + P S+R L +R + + +R + PP
Sbjct: 225 NRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPP 284
Query: 379 APLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG---APR 435
P P + PPV + P P+ SS+ PP PP P P+S G PR
Sbjct: 285 PP--PQNNKPPVPST---------PRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPR 333
Query: 436 LPPVCGDFLLDYSLDRGLP--RSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYA 493
LP + SL P S G +G PP+ P P+ G LP PPPV
Sbjct: 334 LPQ------RNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSR 387
Query: 494 ADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPN-PLLWMPPPTRIPSAGERSGHK 552
S S L P T ++ P + P + P+ P PPP PS R+G +
Sbjct: 388 NGSTSRAL----PATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPP-PSTSIRNGFQ 442
Query: 553 NLALE 557
+ E
Sbjct: 443 DSPCE 447
Score = 34.7 bits (78), Expect = 0.27
Identities = 54/198 (27%), Positives = 71/198 (35%), Gaps = 24/198 (12%)
Query: 257 PERRTPWKPPPSDLYGD----LKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRG 312
P R P PPS D L R S++S T P S GRS P P +
Sbjct: 313 PSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPS--------PGRSGPLPPPPSER 364
Query: 313 AGPQLCKPEGLHSRQWSGSQDSQMGFP-RADPASDRA-SLFVARTRRSNSSEALLVDRAA 370
P + P G S+ G RA PA+ + S + RS L DR +
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPS 424
Query: 371 GGGAGSPPAPLAPSASG--PPVCKSS-------EVLYERPQPTPAFSSRTAGPPDPPRAA 421
G A PP P +G C+ + + P P P + + P R
Sbjct: 425 AG-APPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLPPPEPYVQTTKSYPSKLARNE 483
Query: 422 RPSSAAPASRGAPRLPPV 439
S + RGAP LPP+
Sbjct: 484 SRSGSNRRERGAPPLPPI 501
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 60.8 bits (146), Expect = 4e-09
Identities = 80/317 (25%), Positives = 106/317 (33%), Gaps = 53/317 (16%)
Query: 240 PSPPKAWDQLRAVSGGS-----PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRS 294
P PP Q GG+ P P PPP GD KSR +S + P P P+
Sbjct: 132 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ---GDNKSR-SSRSPPGKPQGPPPQG 187
Query: 295 ASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVAR 354
+ +G P PQ P+G + Q G P P D
Sbjct: 188 GNQPQGPPPPP-------GKPQGPPPQGGNKPQGPPPPGKPQGPP---PQGD-------- 229
Query: 355 TRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQ-PTPAFSSRTAG 413
N S++ R+ G PP GPP +PQ P P ++ G
Sbjct: 230 ----NKSQSA---RSPPGKPQGPPPQGGNQPQGPPPPPG------KPQGPPPQGGNKPQG 276
Query: 414 PPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPG 473
PP P + P + + R PP +G P GG G PP + G
Sbjct: 277 PPPPGKPQGPPPQGGSKSRSSRSPP---------GKPQGPPPQGGNQPQGPPPPPGKPQG 327
Query: 474 PLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPL 533
P + GPPP P +K R+ KP G P + P+ P P
Sbjct: 328 PPPQGGN---KPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPA 384
Query: 534 LWMPPPTRIPSAGERSG 550
P + P AG+ G
Sbjct: 385 GGNPQQPQAPPAGQPQG 401
Score = 48.9 bits (115), Expect = 1e-05
Identities = 50/186 (26%), Positives = 66/186 (35%), Gaps = 23/186 (12%)
Query: 373 GAGSPPAPLAPSAS--GPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPAS 430
G P P +P GPP ++ PQ P + GPP P +P P
Sbjct: 43 GGNKPQGPPSPPGKPQGPPPQGGNQ-----PQGPPPPPGKPQGPP-PQGGNKPQGPPPP- 95
Query: 431 RGAPRLPPVCGDFLLD----YSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLP 486
G P+ PP GD +G P GG G PP + GP +
Sbjct: 96 -GKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG---NKPQ 151
Query: 487 GPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAG 546
GPPP P K +R+ KP G PP+ P+ P PPP +
Sbjct: 152 GPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPP------PPPGKPQGPP 205
Query: 547 ERSGHK 552
+ G+K
Sbjct: 206 PQGGNK 211
Score = 39.3 bits (90), Expect = 0.011
Identities = 53/191 (27%), Positives = 71/191 (37%), Gaps = 40/191 (20%)
Query: 240 PSPPKAWDQLRAVSGGS-----PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRS 294
P PP Q GG+ P P PPP G KSR +S + P P P+
Sbjct: 256 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ---GGSKSR-SSRSPPGKPQGPPPQG 311
Query: 295 ASSFEGRSVPATPVLTRGAGPQLC-KPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVA 353
+ +G P P +G PQ KP+G G P+ P + +
Sbjct: 312 GNQPQGP--PPPPGKPQGPPPQGGNKPQG----------PPPPGKPQGPPPQGGSK---S 356
Query: 354 RTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAG 413
R+ RS + + G PP P A G P ++PQ PA + G
Sbjct: 357 RSARSPPGKPQGPPQQEGNNPQGPPPP----AGGNP---------QQPQAPPA--GQPQG 401
Query: 414 PPDPPRAARPS 424
PP PP+ RPS
Sbjct: 402 PPRPPQGGRPS 412
Score = 38.5 bits (88), Expect = 0.019
Identities = 63/249 (25%), Positives = 86/249 (34%), Gaps = 54/249 (21%)
Query: 240 PSPPKAWDQLRAVSGGS-----PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRS 294
P PP Q GG+ P P PPP GD KS+ S SP + P
Sbjct: 194 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ---GDNKSQ--SARSPPGKPQGPPP- 247
Query: 295 ASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVAR 354
+G + P P G PQ P+G + Q G P + R+S
Sbjct: 248 ----QGGNQPQGPPPPPGK-PQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSS----- 297
Query: 355 TRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQ-PTPAFSSRTAG 413
R+ G PP GPP +PQ P P ++ G
Sbjct: 298 -------------RSPPGKPQGPPPQGGNQPQGPPPPPG------KPQGPPPQGGNKPQG 338
Query: 414 PPDP-------PRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPR-SGGGTGWGEL 465
PP P P+ S +A + G P+ PP + + +G P +GG +
Sbjct: 339 PPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQ-----QEGNNPQGPPPPAGGNPQQPQA 393
Query: 466 PPAAEVPGP 474
PPA + GP
Sbjct: 394 PPAGQPQGP 402
Score = 37.4 bits (85), Expect = 0.042
Identities = 40/162 (24%), Positives = 54/162 (33%), Gaps = 40/162 (24%)
Query: 392 KSSEVLYERPQPTPAFS-SRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSLD 450
+S ++ PQ P ++ GPP PP +P P P+ PP
Sbjct: 27 ESPSLIAGNPQGAPPQGGNKPQGPPSPP--GKPQGPPPQGGNQPQGPPP------PPGKP 78
Query: 451 RGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRA 510
+G P GG G PP P PP S SP R+
Sbjct: 79 QGPPPQGGNKPQGPPPPGK----------------PQGPPPQGDKSRSP---------RS 113
Query: 511 TRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHK 552
KP G PP+ P+ P PPP + + G+K
Sbjct: 114 PPGKPQGPPPQGGNQPQGPP------PPPGKPQGPPPQGGNK 149
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 57.8 bits (138), Expect = 3e-08
Identities = 95/390 (24%), Positives = 137/390 (35%), Gaps = 66/390 (16%)
Query: 268 SDLYGDLKSRRNSVASPTSPTRSLPRSASSF----EGRSVPAT-PVLTRGAGPQLCKPEG 322
+D K++ ++ P SP+ S+ S EG S P R P + P+
Sbjct: 107 ADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQD 166
Query: 323 LHSRQWSGSQDSQMGFPRADPASDRASLFV--ARTRRSNSSEALLVDRAAGGGAGSPP-- 378
S S +Q + +A P + +A V A + + L PP
Sbjct: 167 NESDSDSSAQQQML---QAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQG 223
Query: 379 APLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPP 438
+P A A P ++ V + Q PA + P PP P P L P
Sbjct: 224 SPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPH---------PPLQP 274
Query: 439 VCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPP-----PVYA 493
+ G + P G+ PP GP S + G L PGPP P A
Sbjct: 275 LTGS-----AGQPSAPSHAQPPLHGQGPP-----GPHSLQAGPLLQHPGPPQPFGLPPQA 324
Query: 494 ADSNSPLLRTKD---PHT--------------RATRTKPCGLPPEAAEGPEVHPNPLLWM 536
+ +PL + PHT + R +P LPP P + P
Sbjct: 325 SQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQP--LPPAPLAMPHIKP------ 376
Query: 537 PPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYE 596
PP T IP HK+ + N+ L P +P L S+ HPP H +
Sbjct: 377 PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKP-LSSLSTHHPPSAHPPPLQ 435
Query: 597 V---GQALYGAPSQAP-LPHSRSFTAPPVS 622
+ Q L +P+Q P L S++ PP S
Sbjct: 436 LMPQSQPLPSSPAQPPGLTQSQNLPPPPAS 465
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 57.8 bits (138), Expect = 3e-08
Identities = 95/390 (24%), Positives = 137/390 (35%), Gaps = 66/390 (16%)
Query: 268 SDLYGDLKSRRNSVASPTSPTRSLPRSASSF----EGRSVPAT-PVLTRGAGPQLCKPEG 322
+D K++ ++ P SP+ S+ S EG S P R P + P+
Sbjct: 661 ADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQD 720
Query: 323 LHSRQWSGSQDSQMGFPRADPASDRASLFV--ARTRRSNSSEALLVDRAAGGGAGSPP-- 378
S S +Q + +A P + +A V A + + L PP
Sbjct: 721 NESDSDSSAQQQML---QAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQG 777
Query: 379 APLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPP 438
+P A A P ++ V + Q PA + P PP P P L P
Sbjct: 778 SPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPH---------PPLQP 828
Query: 439 VCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPP-----PVYA 493
+ G + P G+ PP GP S + G L PGPP P A
Sbjct: 829 LTGS-----AGQPSAPSHAQPPLHGQGPP-----GPHSLQAGPLLQHPGPPQPFGLPPQA 878
Query: 494 ADSNSPLLRTKD---PHT--------------RATRTKPCGLPPEAAEGPEVHPNPLLWM 536
+ +PL + PHT + R +P LPP P + P
Sbjct: 879 SQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQP--LPPAPLAMPHIKP------ 930
Query: 537 PPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYE 596
PP T IP HK+ + N+ L P +P L S+ HPP H +
Sbjct: 931 PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKP-LSSLSTHHPPSAHPPPLQ 989
Query: 597 V---GQALYGAPSQAP-LPHSRSFTAPPVS 622
+ Q L +P+Q P L S++ PP S
Sbjct: 990 LMPQSQPLPSSPAQPPGLTQSQNLPPPPAS 1019
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 57.8 bits (138), Expect = 3e-08
Identities = 95/390 (24%), Positives = 137/390 (35%), Gaps = 66/390 (16%)
Query: 268 SDLYGDLKSRRNSVASPTSPTRSLPRSASSF----EGRSVPAT-PVLTRGAGPQLCKPEG 322
+D K++ ++ P SP+ S+ S EG S P R P + P+
Sbjct: 661 ADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQD 720
Query: 323 LHSRQWSGSQDSQMGFPRADPASDRASLFV--ARTRRSNSSEALLVDRAAGGGAGSPP-- 378
S S +Q + +A P + +A V A + + L PP
Sbjct: 721 NESDSDSSAQQQML---QAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQG 777
Query: 379 APLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPP 438
+P A A P ++ V + Q PA + P PP P P L P
Sbjct: 778 SPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPH---------PPLQP 828
Query: 439 VCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPP-----PVYA 493
+ G + P G+ PP GP S + G L PGPP P A
Sbjct: 829 LTGS-----AGQPSAPSHAQPPLHGQGPP-----GPHSLQAGPLLQHPGPPQPFGLPPQA 878
Query: 494 ADSNSPLLRTKD---PHT--------------RATRTKPCGLPPEAAEGPEVHPNPLLWM 536
+ +PL + PHT + R +P LPP P + P
Sbjct: 879 SQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQP--LPPAPLAMPHIKP------ 930
Query: 537 PPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYE 596
PP T IP HK+ + N+ L P +P L S+ HPP H +
Sbjct: 931 PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKP-LSSLSTHHPPSAHPPPLQ 989
Query: 597 V---GQALYGAPSQAP-LPHSRSFTAPPVS 622
+ Q L +P+Q P L S++ PP S
Sbjct: 990 LMPQSQPLPSSPAQPPGLTQSQNLPPPPAS 1019
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 56.2 bits (134), Expect = 9e-08
Identities = 90/373 (24%), Positives = 125/373 (33%), Gaps = 60/373 (16%)
Query: 238 ERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVA-------SPTSPTRS 290
+RP PP L V G +PPP G + A +P P +
Sbjct: 103 QRPGPPSPRRPL--VPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAK- 159
Query: 291 LPRSASSFEGRSVPAT-PVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRAS 349
P ++ R+ P P G GP KP G + Q + + A A+ S
Sbjct: 160 -PAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHA--AAPAVS 216
Query: 350 LFVARTRRSNSSEALLV--DRAAGG---------GAGSPPAPLAPSASGPPVCKSSEVLY 398
L +N ALL AA G GA +PPAP APS P +
Sbjct: 217 LV------NNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAP 270
Query: 399 ERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGG 458
P P PA +R G P P A P+ PA+ ++GG
Sbjct: 271 PPPPPAPATLARPPGHPAGPPTAAPAVPPPAA-----------------------AQNGG 307
Query: 459 GTGWGELP-PAAEVPGPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCG 517
G P PAA P +S + G P P A+S +++ P A +T
Sbjct: 308 SAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPP---AAQTLAAS 364
Query: 518 LPPEAAEGPEVHPNPLLWMPPPTRI--PSAGERSGHKNLALEGLRDWYIRNSGLAAGPQR 575
P A + P +P P + P+ G +G A + R R
Sbjct: 365 GPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIR 424
Query: 576 RPVLPSVGPPHPP 588
+ P+V P P
Sbjct: 425 ATLTPTVLAPRLP 437
Score = 38.1 bits (87), Expect = 0.025
Identities = 72/261 (27%), Positives = 88/261 (33%), Gaps = 63/261 (24%)
Query: 371 GGGAGSPPA------PLAPSASGPPVCK---SSEVLYERPQPTPAFSSRTAGP-PDPPRA 420
GGG P PL P+ PP K E P PA ++ AGP P P
Sbjct: 98 GGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGP 157
Query: 421 ARPSS-AAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRD 479
A+P+ AA A+R P P G P G G G P AA+ L+
Sbjct: 158 AKPAGPAALAARAGPGPGPGPG------------PGPGPGPGKPAGPGAAQT---LNGSA 202
Query: 480 GLLTMLPGPPPVYAADSNSP--LLRTKDPHTRAT--RTKP----CGLPPEAAEGPEVHP- 530
LL P + +N P LL P T +T P P AA P P
Sbjct: 203 ALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPA 262
Query: 531 --NPLLWMPPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPP 588
P PPP P+ R G AGP P+ P PP
Sbjct: 263 PAAPAAAPPPPPPAPAT-----------------LARPPGHPAGP------PTAAPAVPP 299
Query: 589 FLHARCYEVGQALYGAPSQAP 609
A + G + AP+ AP
Sbjct: 300 PAAA---QNGGSAGAAPAPAP 317
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 55.1 bits (131), Expect = 2e-07
Identities = 73/251 (29%), Positives = 85/251 (33%), Gaps = 52/251 (20%)
Query: 373 GAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG 432
GAG PP P P A PP P P P + PP P A P G
Sbjct: 1016 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG--AGIPPPPPLPGAGIPPPPPLPGAG 1073
Query: 433 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVY 492
P PP+ G G+P G G +PP +PG +P PPP+
Sbjct: 1074 IPPPPPLPG---------AGIPPPPPLPGAG-IPPPPPLPG---------VGIPPPPPLP 1114
Query: 493 AADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHK 552
A P P A P LP A P P P + +PPP +P AG
Sbjct: 1115 GAGIPPP-----PPLPGAGIPPPPPLP--GAGIPPPPPLPRVGIPPPPPLPGAGIPPPP- 1166
Query: 553 NLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPH 612
L G AG P LP VG P PP L G P PLP
Sbjct: 1167 --PLPG------------AGIPPPPPLPGVGIPPPPPLPG---------VGIPPPPPLPG 1203
Query: 613 SRSFTAPPVSG 623
+ PP+ G
Sbjct: 1204 AGIPPPPPLPG 1214
Score = 48.1 bits (113), Expect = 2e-05
Identities = 71/255 (27%), Positives = 86/255 (33%), Gaps = 57/255 (22%)
Query: 371 GGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPAS 430
G G PP P P + P + ++ PQP P + PP PP
Sbjct: 872 GLGMVPPPPPPLPGMTVPTLPSTAI-----PQPPPLQGTEMLPPPPPPL---------PG 917
Query: 431 RGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPP 490
G P PP+ G +L P G G +PP +PG +P PPP
Sbjct: 918 AGIPPPPPLPGAGILPLP-----PLPGAG-----IPPPPPLPG---------AAIPPPPP 958
Query: 491 VYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSG 550
+ A P P A P LP A P P P +PPP +P AG
Sbjct: 959 LPGAGIPLP-----PPLPGAGIPPPPPLP--GAGIPPPPPLPGAGIPPPPPLPGAGIPPP 1011
Query: 551 HKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGA--PSQA 608
L G AG P LP G P PP L L GA P
Sbjct: 1012 P---PLPG------------AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1056
Query: 609 PLPHSRSFTAPPVSG 623
PLP + PP+ G
Sbjct: 1057 PLPGAGIPPPPPLPG 1071
Score = 47.8 bits (112), Expect = 3e-05
Identities = 74/264 (28%), Positives = 88/264 (33%), Gaps = 60/264 (22%)
Query: 373 GAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG 432
GAG PP P P A PP P P + PP P A P G
Sbjct: 1060 GAGIPPPPPLPGAGIPP-------------PPPLPGAGIPPPPPLPGAGIPPPPPLPGVG 1106
Query: 433 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPG-------PLSRRDGLLTML 485
P PP+ G G+P G G +PP +PG PL R +
Sbjct: 1107 IPPPPPLPG---------AGIPPPPPLPGAG-IPPPPPLPGAGIPPPPPLPR-----VGI 1151
Query: 486 PGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSA 545
P PPP+ A P P A P LP P P P + +PPP +P A
Sbjct: 1152 PPPPPLPGAGIPPP-----PPLPGAGIPPPPPLPGVGIPPPP--PLPGVGIPPPPPLPGA 1204
Query: 546 GERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYG-- 603
G L G+ G+ P P G P PP L G L
Sbjct: 1205 GIPPPP---PLPGM--------GIPPAPAPPLPPPGTGIPPPPLLPVS----GPPLLPQV 1249
Query: 604 APSQAPLPHSRSFTAPPV-SGRYG 626
S P P F PP+ SG +G
Sbjct: 1250 GSSTLPTPQVCGFLPPPLPSGLFG 1273
Score = 32.3 bits (72), Expect = 1.4
Identities = 47/201 (23%), Positives = 67/201 (33%), Gaps = 16/201 (7%)
Query: 218 LSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSR 277
+ E EEP A+ P P A ++ G + +KP P +K+
Sbjct: 370 VGEDAPQRLGEEPE---EEAQGPDAPAA----ASLPGSPAPSQRCFKPYPLITPCYIKTT 422
Query: 278 RNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMG 337
++SP P + + R P+ +R A + P H + G
Sbjct: 423 TRQLSSPNHSPSQSPNQSPRIKRRPEPSLSRGSRTALASVAAPAKKHRADGGLAA----G 478
Query: 338 FPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKS--SE 395
R+ +D ART R S LL A G LA ASG P
Sbjct: 479 LSRS---ADWTEELGARTPRVGGSAHLLERGVASDSGGGVSPALAAKASGAPAAADGFQN 535
Query: 396 VLYERPQPTPAFSSRTAGPPD 416
V R FS + GPP+
Sbjct: 536 VFTGRTLLEKLFSQQENGPPE 556
>gi|145309324 FH2 domain containing 1 [Homo sapiens]
Length = 1143
Score = 54.3 bits (129), Expect = 3e-07
Identities = 83/350 (23%), Positives = 126/350 (36%), Gaps = 47/350 (13%)
Query: 213 SESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGSP-ERRTPWKPPPSDLY 271
S SS + E G S + P E P+P D + GG P ++ T K +
Sbjct: 807 SMSSGVGEMGDSQVSSNPTSS-PPGEAPAPVSV-DSEPSCKGGLPRDKPTKRKDVVAPKR 864
Query: 272 GDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCK----PEGLHSRQ 327
G LK SP S P SA +G + LT + K +
Sbjct: 865 GSLKE--------ASPGASKPGSARRSQGAVAKSVRTLTASENESMRKVMPITKSSRGAG 916
Query: 328 WSGSQDSQMGFPRADPASDRASLFVART---RRSNSSEALLVDRAAGGGAGSPPA---PL 381
W + S G P +P S +++ + R S +E + R + G + + P PL
Sbjct: 917 WRRPELSSRG-PSQNPPSSTDTVWSRQNSVRRASTGAEEQRLPRGSSGSSSTRPGRDVPL 975
Query: 382 APSAS--GPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPPV 439
P S P + ++P+ + + GP P + S PR+P
Sbjct: 976 QPRGSFKKPSAKPLRNLPRQKPEENKTCRAHSEGPESPKEEPKTPSVPSVPHELPRVP-- 1033
Query: 440 CGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADSNSP 499
S R S + +LPP A+ PG ++R + P AA +S
Sbjct: 1034 --------SFARNTVASSSRSMRTDLPPVAKAPG-ITRTVSQRQLRVKGDPEDAAPKDSS 1084
Query: 500 LLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERS 549
LR RA+ + PE+AEGP + P + AGER+
Sbjct: 1085 TLR------RASSARAPKKRPESAEGPSANTE------APLKARGAGERA 1122
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 53.1 bits (126), Expect = 7e-07
Identities = 87/360 (24%), Positives = 116/360 (32%), Gaps = 60/360 (16%)
Query: 197 LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGS 256
L + AQ EDV S+ S S + P G + + P PP Q GG+
Sbjct: 11 LALSSAQNLNEDV---SQEESPSLIAGNPQGPSPQGG-NKPQGPPPPPGKPQGPPPQGGN 66
Query: 257 -----PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTR 311
P P PPP GD R+ + P P P+ + +G P
Sbjct: 67 KPQGPPPPGKPQGPPPQ---GD--KSRSPRSPPGKPQGPPPQGGNQPQGPPPPP------ 115
Query: 312 GAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAG 371
PQ P+G + Q G P P D++ RS R+
Sbjct: 116 -GKPQGPPPQGGNRPQGPPPPGKPQGPP---PQGDKS--------RS--------PRSPP 155
Query: 372 GGAGSPPAPLAPSASGPPVCKSSEVLYERPQ-PTPAFSSRTAGPPDPPRAARPSSAAPAS 430
G PP GPP +PQ P P + GPP P + P S
Sbjct: 156 GKPQGPPPQGGNQPQGPPPPPG------KPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKS 209
Query: 431 RGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPP 490
R + P +G P GG G PP + GP + GPPP
Sbjct: 210 RSSQSPP----------GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN---KPQGPPP 256
Query: 491 VYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSG 550
+K R+ KP G P + P+ P P P + P AG+ G
Sbjct: 257 PGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQG 316
Score = 38.9 bits (89), Expect = 0.014
Identities = 52/191 (27%), Positives = 70/191 (36%), Gaps = 41/191 (21%)
Query: 240 PSPPKAWDQLRAVSGGS-----PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRS 294
P PP Q GG P P PPP GD R+S + P P P+
Sbjct: 172 PPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQ---GD--KSRSSQSPPGKPQGPPPQG 226
Query: 295 ASSFEGRSVPATPVLTRGAGPQLC-KPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVA 353
+ +G P P +G PQ KP+G G P+ PA + +
Sbjct: 227 GNQPQGP--PPPPGKPQGPPPQGGNKPQG----------PPPPGKPQGPPAQGGSK---S 271
Query: 354 RTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAG 413
++ RS + + G PP P A G P ++PQ PA + G
Sbjct: 272 QSARSPPGKPQGPPQQEGNNPQGPPPP----AGGNP---------QQPQAPPA--GQPQG 316
Query: 414 PPDPPRAARPS 424
PP PP+ RPS
Sbjct: 317 PPRPPQGGRPS 327
Score = 33.5 bits (75), Expect = 0.61
Identities = 59/244 (24%), Positives = 82/244 (33%), Gaps = 46/244 (18%)
Query: 240 PSPPKAWDQLRAVSGGS-----PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRS 294
P PP Q GG+ P P PPP GD R+ + P P P+
Sbjct: 111 PPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQ---GD--KSRSPRSPPGKPQGPPPQG 165
Query: 295 ASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVAR 354
+ +G P PQ P+G Q G P P D++
Sbjct: 166 GNQPQGPPPPP-------GKPQGPPPQGGKKPQGPPPPGKPQGPP---PQGDKS------ 209
Query: 355 TRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQ-PTPAFSSRTAG 413
RS+ S G PP GPP +PQ P P ++ G
Sbjct: 210 --RSSQSPP--------GKPQGPPPQGGNQPQGPPPPPG------KPQGPPPQGGNKPQG 253
Query: 414 PPDPPRAARPSSAAPASRGAPRLPP--VCGDFLLDYSLDRGLPR-SGGGTGWGELPPAAE 470
PP P + P + + + R PP G + + +G P +GG + PPA +
Sbjct: 254 PPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQ 313
Query: 471 VPGP 474
GP
Sbjct: 314 PQGP 317
Score = 31.2 bits (69), Expect = 3.0
Identities = 18/66 (27%), Positives = 22/66 (33%)
Query: 373 GAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG 432
G P P P A G +S+ +PQ P P PP P G
Sbjct: 253 GPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAG 312
Query: 433 APRLPP 438
P+ PP
Sbjct: 313 QPQGPP 318
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 52.4 bits (124), Expect = 1e-06
Identities = 92/334 (27%), Positives = 119/334 (35%), Gaps = 73/334 (21%)
Query: 265 PPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLH 324
PPPSDL + +++ + P +L +A EG + GAG G
Sbjct: 605 PPPSDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGSA--------EGAG-------GPS 649
Query: 325 SRQWSGSQD-SQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAP 383
+SG D S + FP P S +L + L+ +G+PP P
Sbjct: 650 GEPFSGLGDLSPLLFP---PLSAPPTLIALNSA--------LLAATLDPPSGTPPQPCVL 698
Query: 384 SASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAP--RLPPVCG 441
SA PQP P SS T DP A AP++ G P L P+ G
Sbjct: 699 SA---------------PQPGPPTSSVTTATTDP--GASSLGKAPSNSGRPPQLLSPLLG 741
Query: 442 DFLL-DYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPG---PPPVYAADSN 497
LL D S P G LP + PGPL L +LPG PPP+ A S
Sbjct: 742 ASLLGDLSSLTSSP--------GALPSLLQPPGPLLSGQLGLQLLPGGGAPPPLSEASSP 793
Query: 498 SPLLRTKDPHTRATRTKPCGLPPE---AAEGPEVHPNPLLWMPPPTRIP----------- 543
L PC LPPE +A PE PL + PP P
Sbjct: 794 LACLLQSLQIPPEQPEAPC-LPPESPASALEPEPARPPLSALAPPHGSPDPPVPELLTGR 852
Query: 544 SAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRP 577
+G+R L G+ G G +R P
Sbjct: 853 GSGKRGRRGGGGLRGINGEARPARGRKPGSRREP 886
Score = 44.3 bits (103), Expect = 3e-04
Identities = 106/395 (26%), Positives = 140/395 (35%), Gaps = 63/395 (15%)
Query: 262 PWKPPPSDLYGDLKSRRNSVASPTS---PTRSLPRSASS----FEGRSVPATPVLTRGAG 314
P PPPS L G + AS +S P++ PR + EGR P TP +R
Sbjct: 333 PPLPPPSTLQGRRPRAQAPSASHSSSLRPSQRRPRRPPTVFRLLEGRG-PQTPRRSRPRA 391
Query: 315 PQ-LCKPEGLH--SRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAG 371
P + +P L S+ S S +G P P+ S + + L
Sbjct: 392 PAPVPQPFSLPEPSQPILPSVLSLLGLPTPGPSHSDGSFNLLGSDAHLPPPPTL------ 445
Query: 372 GGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASR 431
+GSPP P P P S + P P +S+ P P + +
Sbjct: 446 -SSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAASKAPVVPSPVLQSPSEGLGMGAG 504
Query: 432 GAPRLPPVCGDFLLDY-SLDRGLPRSGGGTG--WGELPPAAEV----PGPLSRRD--GLL 482
A LPP+ G + S ++GL SG G G LP + P PL G+L
Sbjct: 505 PACPLPPLAGGEAFPFPSPEQGLALSGAGFPGMLGALPLPLSLGQPPPSPLLNHSLFGVL 564
Query: 483 TMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCG----LPPEAAEGPE------VHPNP 532
T G PP PLL P G L P EGP + P P
Sbjct: 565 TGGGGQPP------PEPLL-----------PPPGGPGPPLAPGEPEGPSLLVASLLPPPP 607
Query: 533 LLWMPPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRP------VLPSVGPP- 585
+PPP+ PS S LAL ++ A GP P + P + PP
Sbjct: 608 SDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGSAEGAGGPSGEPFSGLGDLSPLLFPPL 667
Query: 586 -HPPFLHARCYEVGQALYGAPSQAPLPHSRSFTAP 619
PP L A + A PS P P +AP
Sbjct: 668 SAPPTLIALNSALLAATLDPPSGTP-PQPCVLSAP 701
Score = 35.0 bits (79), Expect = 0.21
Identities = 66/260 (25%), Positives = 88/260 (33%), Gaps = 20/260 (7%)
Query: 372 GGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASR 431
GGA + P AP + ++ P P P+ P A+ SS P+ R
Sbjct: 305 GGAPTVEGPGAPPFLASSLLSAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQR 364
Query: 432 GAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSR-RDGLLTMLPGPPP 490
PR PP F L PR +P +P P +L++L P P
Sbjct: 365 -RPRRPPTV--FRLLEGRGPQTPRRSRPRAPAPVPQPFSLPEPSQPILPSVLSLLGLPTP 421
Query: 491 VYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEG-----PEVHPNPLLWMPPPTRIPSA 545
+ S L D H T G PP+ P L +P P+A
Sbjct: 422 GPSHSDGSFNLLGSDAHLPPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAA 481
Query: 546 GERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGA- 604
+ + L+ + G+ AGP P+ P G PF E G AL GA
Sbjct: 482 SKAPVVPSPVLQSPSE----GLGMGAGP-ACPLPPLAGGEAFPFPSP---EQGLALSGAG 533
Query: 605 -PSQ-APLPHSRSFTAPPVS 622
P LP S PP S
Sbjct: 534 FPGMLGALPLPLSLGQPPPS 553
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 52.0 bits (123), Expect = 2e-06
Identities = 165/655 (25%), Positives = 222/655 (33%), Gaps = 148/655 (22%)
Query: 68 PPECPLEPGERPQLVR----RRPPTARAYPP---PHPNQAHHSLCPAEELALEALEREVS 120
PP P P + P + + PP+ + PP PH + P LAL +L+ S
Sbjct: 360 PPATP--PSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTS 417
Query: 121 VQQQIAAAARR-LALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLP-- 177
+ A L ++P R+ Q + R ++A L LP P
Sbjct: 418 LGSPTLQATHSFLTMSP--------RQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPL 469
Query: 178 ----LPQPLPLSTGSVITTQGVCLGMRLAQLSQEDVV-------LHSESS----SLSESG 222
P PLS S +T + LA S + + L ++SS SL
Sbjct: 470 QTSLSPAVSPLS--SPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPP 527
Query: 223 ASHDNEEPHGCFSLAERP----SPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRR 278
AS SLA P S P L +P P + PPS L
Sbjct: 528 ASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAP---CPLQAPPSPLTTPPPETP 584
Query: 279 NSVASP---------TSPTRSLPRSASSFEGR------------------SVPATPVLTR 311
+S+A+P + P + LP S S PA+P L+
Sbjct: 585 SSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSP 644
Query: 312 GAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAG 371
A P P L P P S AS V+ + S +
Sbjct: 645 LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPL 704
Query: 372 GGAGSPPA--PLAPSASGPPVCK---SSEVLYERPQP--TPAFSSRTAGPP-------DP 417
SPPA P++PSA+ PP ++ L P P +P S PP P
Sbjct: 705 QVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAP 764
Query: 418 PRAARPSSAA-----PASRGAPRLPPVCGDFLLDYSLDRGLPRSGGG-TGWGELPPAAEV 471
P PS A P ++ P+ PP L + LP G P+A +
Sbjct: 765 PLQVPPSPPASLPMSPLAKPPPQAPPALATPPL-----QALPSPPASFPGQAPFSPSASL 819
Query: 472 PGPLSRRDGLLTMLPGPPPVYAADSNSPLLRT-----KDPHTRATRTKPCGLPPEAAEGP 526
P L T P PPV AA PLL+ P +A R P P + GP
Sbjct: 820 P-----MSPLATPPPQAPPVLAA----PLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGP 870
Query: 527 E----VHPNPLLWMPPPTRIPSA----GERSGHKNLAL---EGLRDWYI-RNSGLAAGPQ 574
+ P P PPP+R PS+ + +GH + A E LR + G AA P
Sbjct: 871 RLTLALAPGP---PPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPP 927
Query: 575 RRPVLPSVGP------PHPPFLHARCYEVGQALYGAPSQAPLPHSRSFTAPPVSG 623
L + P P PP A GAP APLP PP +G
Sbjct: 928 PDAELAACHPAAWSRGPAPPL----------AFRGAPG-APLPW------PPATG 965
Score = 47.4 bits (111), Expect = 4e-05
Identities = 71/292 (24%), Positives = 104/292 (35%), Gaps = 42/292 (14%)
Query: 239 RPSPPKAWDQLRAVSGGSPERRTPWKPP----PSDLYGDLKSRRNSVASPTSPTRSLPRS 294
RP PP + ++VS S T P PS G + S++S +P S RS
Sbjct: 197 RPRPPTEGPR-KSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS 255
Query: 295 ASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVAR 354
S R P P A P KP+GL + + Q+ PR D A L +
Sbjct: 256 GPS--ARGTPRAP-----AHPSQPKPKGLQALR-----PPQVTPPRKDAAPALGPLSSSP 303
Query: 355 TRRSNSSEALLVDRAAGGGAGSP-PAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAG 413
+ S A +P PA L PS PP+ + P P+ + +
Sbjct: 304 LATPSPSGTKARPVPPPDNAATPLPATLPPS---PPLATPLPLAPPSPSAPPSLQTLPSP 360
Query: 414 PPDPPRAARPSSAAPASRGAPRL---PPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAE 470
P PP A PS P + P L PP+ + +SL P
Sbjct: 361 PATPPSQAPPSMTTPPMQAPPSLQTIPPI----QVPHSLTS--------------PSLQA 402
Query: 471 VPGPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEA 522
P PL+ T G P + A S + + + + ++P PP++
Sbjct: 403 PPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDS 454
Score = 39.7 bits (91), Expect = 0.008
Identities = 78/334 (23%), Positives = 108/334 (32%), Gaps = 48/334 (14%)
Query: 239 RPSPPKAWDQLRAVSGGSPERRTPWK-----------PPPSDLYGDLKSRRNSVASPTSP 287
RP PP LR + R P P + G +S S +P S
Sbjct: 34 RPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASR 93
Query: 288 TRSLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDR 347
+ R + ++ PV + G +P L + S + + +A A R
Sbjct: 94 PPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKR 153
Query: 348 ASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAF 407
++L A RR S G P +P+ + +EV RP P+
Sbjct: 154 SALS-AGARRDTS--------------GPTPGTPSPAMARRSRAAGTEVGLPRPAPSARP 198
Query: 408 SSRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDF-------LLDYSLDRGLPRSGGGT 460
T GP +A S S A R P G L + P G +
Sbjct: 199 RPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPS 258
Query: 461 GWGELPPAAEVPGPLSRRDGLLTMLP---GPPPVYAADSNSPL----LRTKDPHTRATRT 513
G P A + GL + P PP AA + PL L T P R
Sbjct: 259 ARG--TPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARP 316
Query: 514 KPCGLPPEAAEGP---EVHPNPLLWMPPPTRIPS 544
P PP+ A P + P+P L P P PS
Sbjct: 317 VP---PPDNAATPLPATLPPSPPLATPLPLAPPS 347
Score = 38.1 bits (87), Expect = 0.025
Identities = 52/213 (24%), Positives = 65/213 (30%), Gaps = 32/213 (15%)
Query: 418 PRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRG------LPRSGGGTGWGELPPAAEV 471
P A P P G+PR PP L G L GG G +P +A
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 472 PGPLSRRDGLLTMLPGP-PPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHP 530
GP +R G + P PP +P + P GP P
Sbjct: 77 AGP-TRSAGTSSRNPASRPPASGRGERAPPAKNTSP------------------GPVSSP 117
Query: 531 NPLLWMPPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFL 590
P + G R + G + S L+AG +R P+ G P P
Sbjct: 118 GRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAM- 176
Query: 591 HARCYEVGQALYGAPSQAPLPHSRSFTAPPVSG 623
AR G P AP R PP G
Sbjct: 177 -ARRSRAAGTEVGLPRPAPSARPR----PPTEG 204
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 51.6 bits (122), Expect = 2e-06
Identities = 133/579 (22%), Positives = 196/579 (33%), Gaps = 126/579 (21%)
Query: 82 VRRRPPTARAYPPPHPNQAH--HSLCPAEELAL--EALEREVSVQQQIAAAAR-RLALAP 136
VR P + YP P +H PA + + E++ R S + + ++ P
Sbjct: 334 VRSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVTPNP 393
Query: 137 DL------STEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVI 190
DL + E+RR+R Q + L + + + P + P + V+
Sbjct: 394 DLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPA----PRDRASPAAAEEVV 449
Query: 191 TTQGVCL-------------GMRLAQLSQEDVVLHSESSSLSES----GASHDNEEPHGC 233
CL L++ S + L++ S E +SH E
Sbjct: 450 PEWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPE----- 504
Query: 234 FSLAERPSP----PKAWDQLRAVSGG-SPERRTPWKPPPSDLY-------GDLKSRRNS- 280
LA PSP P +W G R+P + PP+ LY G L+
Sbjct: 505 --LARCPSPTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQ 562
Query: 281 ----------VASPTS-PTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWS 329
V SP P + PR+AS + S+ P L +GA P
Sbjct: 563 PPYQLRPSLFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPP------------- 609
Query: 330 GSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPP 389
A P R+S + + +S + V GG +P++PS + P
Sbjct: 610 ---------SPALPRPSRSSPGLYTSPGQDSLQPTAVSPPYGGDI----SPVSPSRAWSP 656
Query: 390 VCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSL 449
K + P P+FS+R AG R ++ P + GA R P LD +
Sbjct: 657 RAKQA--------PRPSFSTRNAGIEAQDRRESLPTSPPWTPGASRPPS-----SLDGWV 703
Query: 450 DRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADS------------- 496
G G G+ PP P P+S ++ P P A
Sbjct: 704 SPGPWEPGRGSSMSS-PPPLPPPPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNII 762
Query: 497 NSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLAL 556
N+ ++ P + PP A P P P PP R P R G + A+
Sbjct: 763 NAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPP----PPRMRSPQPA-RPG--SAAV 815
Query: 557 EGLRDWYIRNSGLAAGPQ--RRPVLPSVGPPHPPFLHAR 593
G I S L AGP P P PP PFL+ R
Sbjct: 816 PGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPR-PFLYRR 853
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 51.2 bits (121), Expect = 3e-06
Identities = 114/428 (26%), Positives = 153/428 (35%), Gaps = 102/428 (23%)
Query: 239 RPSPPKAWDQLRAVSGGSPERRTP----WKPPPSDLYGDLKSRRNSVASPTSPTRSLPRS 294
+P PP ++ +P + P WKPPP L S R +P + P S
Sbjct: 143 KPPPPPRQLSVKDTVPRAPSQFPPPLETWKPPPP-----LPSERQPADRRITPALATPAS 197
Query: 295 ASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQ--DSQMGFPRADPASDRASLFV 352
+ E ++ P T G P H+ + +Q DS+ G + ++ +
Sbjct: 198 PPT-ESQAGPRNQGQTAGRARGGAPP---HAGEGEMAQPADSESGLSLLCKITFKSRPSL 253
Query: 353 ARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFS---- 408
A S+S L + GGG G +ASG +EVL + P P A
Sbjct: 254 APPAASSS---LAAKASLGGGGGGGLF----AASG--AISYAEVLKQGPLPPGAARPLGE 304
Query: 409 -SRTA-----GPPDPPRAARPSSAAPASRGAPRLPPVCGDF-----LLDY-SLDRGLPR- 455
SR A G D + P SA PAS+ PP F D+ S G R
Sbjct: 305 VSRGAQEAEGGDGDGEGCSGPPSA-PASQARALPPPPYTTFPGSKPKFDWVSAPDGPERH 363
Query: 456 -----SGGGTG------------WGELPPAAE----VPGPLSRRDGLLTMLPGPPPVYAA 494
+GGG G WG PP E PGP RR + P P ++ A
Sbjct: 364 FRFNGAGGGIGAPRRRAAALSGPWGSPPPPPEQIHSAPGP--RRPAPALLAP-PTFIFPA 420
Query: 495 DSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNL 554
+N +R P + P PP + P + P PL PP T GHK
Sbjct: 421 PTNGEPMRPGPPGLQELPPLPPPTPPPTLQPPALQPTPLPVAPPLT------PGLGHKES 474
Query: 555 ALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSR 614
AL P+ P PP L A QA APS AP P +
Sbjct: 475 AL----------------------APTAAPALPPALAA-----DQA--PAPSPAPAP-TV 504
Query: 615 SFTAPPVS 622
+ +PPVS
Sbjct: 505 AEPSPPVS 512
Score = 35.8 bits (81), Expect = 0.12
Identities = 60/254 (23%), Positives = 82/254 (32%), Gaps = 65/254 (25%)
Query: 234 FSLAERPSPPKAWDQLRAVSGG--SPERRT-----PW---KPPPSDLYGDLKSRRNSVAS 283
F P P+ + GG +P RR PW PPP ++ RR + A
Sbjct: 351 FDWVSAPDGPERHFRFNGAGGGIGAPRRRAAALSGPWGSPPPPPEQIHSAPGPRRPAPAL 410
Query: 284 PTSPTRSLPRSASSFEGRSVPA----TPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFP 339
PT P + R P P L P +P L P
Sbjct: 411 LAPPTFIFPAPTNGEPMRPGPPGLQELPPLPPPTPPPTLQPPALQPTP----------LP 460
Query: 340 RADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYE 399
A P + G G + LAP+A+ P + +
Sbjct: 461 VAPPLTP--------------------------GLGHKESALAPTAA--PALPPALAADQ 492
Query: 400 RPQPTPAFSSRTAGPPDPPRAARPSSAAP------------ASRGAPRLPPVCGDFLLDY 447
P P+PA + T P PP +A +AAP A+RGA R + GD +
Sbjct: 493 APAPSPA-PAPTVAEPSPPVSAPAPAAAPIKTRTRRNKGSRAARGATRKDGLHGDGPRER 551
Query: 448 SLDRGLPRSGGGTG 461
+ SGGG G
Sbjct: 552 ATATVPDSSGGGGG 565
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 50.1 bits (118), Expect = 6e-06
Identities = 71/251 (28%), Positives = 80/251 (31%), Gaps = 75/251 (29%)
Query: 367 DRAAG-GGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSS 425
DR G G G PP P P+ PP RP P GPP P + P
Sbjct: 215 DRFPGPAGPGGPPPPF-PAGQTPP----------RPPLGPPGPPGPPGPPPPGQVLPPPL 263
Query: 426 AAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPA--------AEVPGPLSR 477
A P +RG PPV L G P G G LPP PGP
Sbjct: 264 AGPPNRGDRPPPPV---------LFPGQP--FGQPPLGPLPPGPPPPVPGYGPPPGPPPP 312
Query: 478 RDGLLTMLPGP-PPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWM 536
+ G PGP PP PL PH PP A P H NP +
Sbjct: 313 QQG-PPPPPGPFPPRPPGPLGPPLTLAPPPHLPG--------PPPGAPPPAPHVNP-AFF 362
Query: 537 PPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYE 596
PPPT NSG+ R P PP P+ Y+
Sbjct: 363 PPPT-------------------------NSGMPTSDSRGP------PPTDPYGRPPPYD 391
Query: 597 VGQALYGAPSQ 607
G YG P +
Sbjct: 392 RGD--YGPPGR 400
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 49.7 bits (117), Expect = 8e-06
Identities = 85/349 (24%), Positives = 122/349 (34%), Gaps = 79/349 (22%)
Query: 212 HSESSSLSESGASHDNEEP------HGCFSLAERPSP-----PKAWDQLRAVSGGSPERR 260
+ +SSS S S +S ++E P +G R SP P + + S RR
Sbjct: 489 NQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRR 548
Query: 261 TPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKP 320
+P PP +RR SP P R R+ + R P+ P R P+ P
Sbjct: 549 SPSPPP---------TRRRRSPSPAPPPRRR-RTPTPPPRRRTPSPPPRRRSPSPRRYSP 598
Query: 321 EGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAP 380
R++S P P AS RR++ S PP
Sbjct: 599 P--IQRRYS---------PSPPPKRRTASPPPPPKRRASPS---------------PPPK 632
Query: 381 LAPSASGPPVCKSSEVLYERPQP---------TPAFSSRTAGPPDPPRAARPSSAAPASR 431
S S PP +SS V R +P+ S+R A P P + PS A +
Sbjct: 633 RRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQ 692
Query: 432 GAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPV 491
+ PPV R G + P + P P +R ++ P P +
Sbjct: 693 TSSSPPPV---------------RRGASSS----PQRRQSPSPSTRPIRRVSRTPEPKKI 733
Query: 492 YAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPT 540
A S SP + +R+ G P AA+ P P+P+ P T
Sbjct: 734 KKAASPSPQSVRRVSSSRSV----SGSPEPAAKKPPAPPSPVQSQSPST 778
Score = 36.6 bits (83), Expect = 0.072
Identities = 54/203 (26%), Positives = 70/203 (34%), Gaps = 37/203 (18%)
Query: 237 AERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASP-----TSPTRSL 291
A P PPK RA P+RR PPP + RR+ S +SP+RS
Sbjct: 615 ASPPPPPKR----RASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRST 670
Query: 292 PRSASSFEGRSVPATPVLTRGAGPQL-CKPEGLHSRQWSGSQDSQMGFPRADP------- 343
+ S + +P R PQ P + S Q Q P P
Sbjct: 671 REARSPQPNKRHSPSP---RPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRT 727
Query: 344 -----ASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEV-- 396
AS RR +SS + V + A PPAP +P S P S
Sbjct: 728 PEPKKIKKAASPSPQSVRRVSSSRS--VSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVP 785
Query: 397 LYERPQPTPAFSSRTAGPPDPPR 419
+ + PTP+ P PPR
Sbjct: 786 VKKAKSPTPS--------PSPPR 800
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 49.3 bits (116), Expect = 1e-05
Identities = 85/333 (25%), Positives = 106/333 (31%), Gaps = 63/333 (18%)
Query: 218 LSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSR 277
L+ S A NE+ S E PS + R GG+ +RTP PPP G
Sbjct: 11 LALSSAQSLNED----VSQEESPSVISGKPEGRRPQGGNQPQRTP--PPPGKPEGRPPQG 64
Query: 278 RNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDS--Q 335
N P P P G ++G P+ KPEG + + SQ +
Sbjct: 65 GNQSQGPP-PRPGKPEGPPPQGGNQ-------SQGPPPRPGKPEGQPPQGGNQSQGPPPR 116
Query: 336 MGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSE 395
G P P N S+ G PP P P GPP ++
Sbjct: 117 PGKPEGPPPQG-----------GNQSQ------------GPPPRPGKPE--GPPPQGGNQ 151
Query: 396 VLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDR---- 451
+ P P P + GPP P+ S P G P PP G R
Sbjct: 152 S--QGPPPRPG---KPEGPP--PQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKP 204
Query: 452 -GLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRA 510
G P GG G P + GP S+ GPPP P P
Sbjct: 205 EGPPPQGGNQSQGPPPRPGKPEGPPSQGGN---KPQGPPPHPGKPQGPPPQEGNKPQRPP 261
Query: 511 TRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIP 543
+P G PP NP +PPP P
Sbjct: 262 PPGRPQGPPPPGG-------NPQQPLPPPAGKP 287
Score = 37.7 bits (86), Expect = 0.032
Identities = 63/238 (26%), Positives = 74/238 (31%), Gaps = 50/238 (21%)
Query: 400 RPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDR-----GLP 454
+PQ TP + G P P+ S P G P PP G R G P
Sbjct: 46 QPQRTPPPPGKPEGRP--PQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQP 103
Query: 455 RSGGGTGWGELPPAAEVPGPLSRRDGLLTMLP-------GPPPVYAADSNSPLLRTKDPH 507
GG G P + GP + P GPPP S P R
Sbjct: 104 PQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRP---- 159
Query: 508 TRATRTKPCGLPPEA---AEGPEVHPNPLLWMPPPTRIPSAG--ERSGHKNLALEGLRDW 562
KP G PP+ ++GP HP PP S G R G EG
Sbjct: 160 -----GKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKP----EGPPP- 209
Query: 563 YIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSFTAPP 620
+ + GP RP P GPP + G Q P PH PP
Sbjct: 210 --QGGNQSQGPPPRPGKPE-GPP--------------SQGGNKPQGPPPHPGKPQGPP 250
Score = 30.8 bits (68), Expect = 3.9
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 10/64 (15%)
Query: 375 GSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAP 434
G PP P P GPP + ++ +RP P R GPP P P P G P
Sbjct: 238 GPPPHPGKPQ--GPPPQEGNKP--QRPPPP----GRPQGPPPP--GGNPQQPLPPPAGKP 287
Query: 435 RLPP 438
+ PP
Sbjct: 288 QGPP 291
Score = 30.8 bits (68), Expect = 3.9
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 7/47 (14%)
Query: 377 PPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARP 423
PP P P PP QP P + + GPP PP+ RP
Sbjct: 260 PPPPGRPQGPPPPGGNPQ-------QPLPPPAGKPQGPPPPPQGGRP 299
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 48.9 bits (115), Expect = 1e-05
Identities = 91/374 (24%), Positives = 125/374 (33%), Gaps = 76/374 (20%)
Query: 228 EEPHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRR-----NSVA 282
E P L + P +D + G P P L+ S R +S
Sbjct: 134 EPPSSGSPLLSQLGQPSIFDTQKGQGPGGDGFYLPTAGAPGSLHSHAPSARTPGGGHSSG 193
Query: 283 SPTSPTRSLPRSASSFEGRSVPATPVL----TRGAGPQLCKPEGL----HSRQWSGSQDS 334
+P + S A GR P+ R G + P G+ + G QD
Sbjct: 194 APAKGSSSRDGPAKERAGRGGEPPPLFGKKDPRARGEEASGPRGVVDLTQEARAEGRQDR 253
Query: 335 QMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPL------------- 381
G PR ++R S F+A ++ N++ V GGAG P
Sbjct: 254 --GPPRL---AERLSPFLAESKTKNAALQPSVLTMCNGGAGDVGLPALVAEAGRGGAKEA 308
Query: 382 APSASGPPVCKSSEVLYERPQPTPAF----SSRTAGPPDPPRAARPSSAAPASRG----- 432
A G + + +E L P+P P+ + GPP PP AA P+ R
Sbjct: 309 ARQDEGARLLRRTETLLPGPRPCPSPLPPPPAPPKGPPAPP-AATPAGVYTVFREQGREH 367
Query: 433 ---APRLPPVCGDF--------LLDYSLD-RGLPRSGGGTGWGELPPAAEVPGPLSRRDG 480
AP P F + + D R R G G + PP + P PL R +G
Sbjct: 368 RVVAPTFVPSVEAFDERPGPIQIASQARDARAREREAGRPGVLQAPPGS--PRPLDRPEG 425
Query: 481 L------LTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKP---CGLPPEAAEGPEVHPN 531
L + L PPP A P RATR P +P + PE P
Sbjct: 426 LREKNSVIRSLKRPPPADA------------PTVRATRASPDPRAYVPAKELLKPEADPR 473
Query: 532 PLLWMPPPTRIPSA 545
P P P+A
Sbjct: 474 PCERAPRGPAGPAA 487
Score = 38.5 bits (88), Expect = 0.019
Identities = 52/226 (23%), Positives = 78/226 (34%), Gaps = 26/226 (11%)
Query: 213 SESSSLSESGASHDNEEPHG-CFSLAERPSPPKAWDQLRAVSGGSPERRTPWKP---PPS 268
S+ + + G + +EEP +PS D+ + G+P P P PS
Sbjct: 2308 SKDTGEGKDGGTAGSEEPGAKARGRGRKPSAKAKGDRAATLEEGNPTDEVPSTPLALEPS 2367
Query: 269 DLYGDLKSRRNSV---------------ASPTSPTRSLPRSASSFEGRSVPAT-----PV 308
G KS V SP P + + F PAT P+
Sbjct: 2368 STPGSKKSPPEPVDKRAKAPKARPAPPQPSPAPPAFTSCPAPEPFAELPAPATSLAPAPL 2427
Query: 309 LTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDR 368
+T A KP+ + + SG++ + A+ V + + EALL+
Sbjct: 2428 ITMPATRP--KPKKARAAEESGAKGPRRPGEEAELLVKLDHEGVTSPKSKKAKEALLLRE 2485
Query: 369 AAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGP 414
G G P L S PP SSE P+ T ++ GP
Sbjct: 2486 DPGAGGWQEPKSLLSLGSYPPAAGSSEPKAPWPKATDGDLAQEPGP 2531
Score = 30.8 bits (68), Expect = 3.9
Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 11/98 (11%)
Query: 339 PRADPASDRASLFVAR--TRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEV 396
P A DRA+ T S+ L + G SPP P+ A P +
Sbjct: 2336 PSAKAKGDRAATLEEGNPTDEVPSTPLALEPSSTPGSKKSPPEPVDKRAKAPKARPAP-- 2393
Query: 397 LYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAP 434
PQP+PA + T+ P P A P APA+ AP
Sbjct: 2394 ----PQPSPAPPAFTSCPAPEPFAELP---APATSLAP 2424
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 47.8 bits (112), Expect = 3e-05
Identities = 46/157 (29%), Positives = 59/157 (37%), Gaps = 25/157 (15%)
Query: 377 PPAPLAPSAS---GPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGA 433
P AP AP +S PPV +SS+ P A + G P PP P P
Sbjct: 506 PRAPHAPKSSLPPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDD 565
Query: 434 PRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYA 493
P LPP DF+ E PP P P S + LP PPP
Sbjct: 566 PELPPPPPDFM-------------------EPPPDFVPPPPPSYAGIAGSELPPPPPPPP 606
Query: 494 ADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHP 530
A + +P+ + P + P +PP+ E P HP
Sbjct: 607 APAPAPVPDSARPPPAVAKRPP--VPPKRQENPG-HP 640
Score = 33.1 bits (74), Expect = 0.80
Identities = 44/166 (26%), Positives = 63/166 (37%), Gaps = 32/166 (19%)
Query: 339 PRADPASDRASLF----VARTRRSNSSEA--LLVDRAAGGGAGSPPAPLAPSASGPPVCK 392
PRA P + ++SL V R+ ++ S A L GGG +PP P PP
Sbjct: 506 PRA-PHAPKSSLPPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLD 564
Query: 393 SSEVLYERP---QPTPAF------------SSRTAGPPDPPRAARPSSAAPASRGAP--- 434
E+ P +P P F S PP PP A P+ ++R P
Sbjct: 565 DPELPPPPPDFMEPPPDFVPPPPPSYAGIAGSELPPPPPPPPAPAPAPVPDSARPPPAVA 624
Query: 435 RLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDG 480
+ PPV + P GG G GE +++ L ++ G
Sbjct: 625 KRPPV-------PPKRQENPGHPGGAGGGEQDFMSDLMKALQKKRG 663
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 47.0 bits (110), Expect = 5e-05
Identities = 76/292 (26%), Positives = 89/292 (30%), Gaps = 73/292 (25%)
Query: 342 DPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERP 401
DPAS AR R AL GG PP P +P PP +
Sbjct: 1348 DPASPLGLALAARER------ALKESSEGGGAPQPPPRPPSPRYEAPPPTPHHHSPHAHH 1401
Query: 402 QPTPAFSSRTAGPPDPPRAARPSSAAPAS--RGAPRLPPVCGDFLLDYSLDRGLPRSGGG 459
+P A PPDP R A S + P PP LL
Sbjct: 1402 EPVLRLWG--ASPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLH------------- 1446
Query: 460 TGWGELPPAAEVPGPLSRRDGLLTMLPGP---PPVYAADSNSP--------LLRTKDPHT 508
LPP A GPL + G P P P +A P L P
Sbjct: 1447 ----RLPPTAPGVGPLLLQLGTEPPAPHPGVSKPWRSAAPEEPERLPLHVRFLENCQPRA 1502
Query: 509 RATRTKPCGLPPEAAEGPEV-HPNPLLWMPPPTRIPSAGERSGHKNLALEGLRDWYIRNS 567
T G P + +GP V P+P +PP P A E +G L L
Sbjct: 1503 PVT----SGRGPPSEDGPGVPPPSPRRSVPPSPTSPRASEENGLPLLVLP---------- 1548
Query: 568 GLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSFTAP 619
P PSV E G+ L+ P PL S SF P
Sbjct: 1549 ---------PPAPSVD-----------VEDGEFLFVEPLPPPLEFSNSFEKP 1580
Score = 42.7 bits (99), Expect = 0.001
Identities = 90/352 (25%), Positives = 110/352 (31%), Gaps = 94/352 (26%)
Query: 238 ERPS--PPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSA 295
ERPS PP LR S G+ E P+ PP+ + S S P PT S P
Sbjct: 873 ERPSFLPPGPGLMLRQKSIGAAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPP 932
Query: 296 SSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGS---QDSQMGFPRADPASDRA---- 348
S TP + +G P G SG S F P R
Sbjct: 933 YS--------TPPVPSSSGRLTPSPRGGPFNPGSGGPLPASSPASFDGPSPPDTRVGSRE 984
Query: 349 -SLFVA---------------------RTRRSNSSEALLVDRAAGGGAGSPPAPLA---- 382
SL+ + + ++ + GG PP LA
Sbjct: 985 KSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQ 1044
Query: 383 PSASGPPVCKSSEVLYERPQPTPAFSS------------RTAGP-----PDPPRAARPSS 425
PS G P PTP S + GP PPRAA +
Sbjct: 1045 PSLRG--------WRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPALRYFQLPPRAASAAM 1096
Query: 426 AAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTML 485
PA G R P L+ + G P+ GGG LPPA P S
Sbjct: 1097 YVPARSGRGRKGP-----LVKQTKVEGEPQKGGG-----LPPAPSPTSPAS--------- 1137
Query: 486 PGPPPVYAADSNS-----PLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNP 532
P PPP AA S P + K P T ++ G EA P P P
Sbjct: 1138 PQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAE--PPTQPEP 1187
Score = 38.5 bits (88), Expect = 0.019
Identities = 68/271 (25%), Positives = 87/271 (32%), Gaps = 62/271 (22%)
Query: 377 PPAPLAPSASG---------PPVCKSSEV-----LYERPQPTPAFSSRTAGPPDPPRAAR 422
PP+P +P AS PP S +V L+ P P P S + P+ P
Sbjct: 1528 PPSPTSPRASEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPG 1587
Query: 423 PSSAAPASRG-APRLPPV--------------CGDFLLDYSLDRGLPRSGGGTGWGEL-- 465
P P + A LPPV L Y + G G+
Sbjct: 1588 PPHPLPDTPAPATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGASAAPGDPHP 1647
Query: 466 --PPAAEVPGPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAA 523
PPA P P + + G P PPP + R+ H T + L +A
Sbjct: 1648 PGPPAPAAPAPAAPQPG-----PDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSA 1702
Query: 524 EGPEVHPNPLLWMPPPTRIPSAGERSGHKNLALEG--LRDWYIRN-SGLAAGPQRRPVLP 580
EG SAG G G L D Y+ G A G P
Sbjct: 1703 EGG----------------GSAGGGGGAGAGVASGPELLDTYVAYLDGQAFGGSSTP--- 1743
Query: 581 SVGPPHPPFLHARCYEVGQALYGAPSQAPLP 611
GPP+PP L G+AL + P P
Sbjct: 1744 --GPPYPPQLMTPSKLRGRALGASGGLRPGP 1772
Score = 36.2 bits (82), Expect = 0.094
Identities = 101/386 (26%), Positives = 129/386 (33%), Gaps = 78/386 (20%)
Query: 172 GLPVLPLPQPLPLSTGSVITTQGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPH 231
GLP+L LP P P SV G E + + L S + E P
Sbjct: 1541 GLPLLVLPPPAP----SVDVEDG------------EFLFVEPLPPPLEFSNSFEKPESPL 1584
Query: 232 GCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGD--LKSRRNSVASPTSPTR 289
P PP A P P PPP+ L S +S+ S S
Sbjct: 1585 -------TPGPPHPLPDTPA-----PATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVA 1632
Query: 290 SLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDR-- 347
+L + AS+ G P P P +P + G D S
Sbjct: 1633 TLTQGASAAPGDPHPPGPPAPAAPAPAAPQPGP------DPPPGTDSGIEEVDSRSSSDH 1686
Query: 348 --ASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTP 405
++ A T S S+E +AGGG G+ A ASGP + + V Y Q
Sbjct: 1687 PLETISSASTLSSLSAEG---GGSAGGGGGAG----AGVASGPELL-DTYVAYLDGQ--- 1735
Query: 406 AFS-SRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGL-PRSGGGTGWG 463
AF S T GPP PP+ PS + GA GL P GG
Sbjct: 1736 AFGGSSTPGPPYPPQLMTPSKLRGRALGA----------------SGGLRPGPSGGLRDP 1779
Query: 464 ELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKD----PHTRATRTKPCGLP 519
P + V + DGLL + P A + P+ + P A+ LP
Sbjct: 1780 VTPTSPTVSVTGAGTDGLLALRACSGPPTAGVAGGPVAVEPEVPPVPLPTASSLPRKLLP 1839
Query: 520 PEAAEGPEVHPNPLLWMPPPTRIPSA 545
E EGP P PL P P P A
Sbjct: 1840 WE--EGPGPPPPPL---PGPLAQPQA 1860
Score = 33.9 bits (76), Expect = 0.47
Identities = 61/222 (27%), Positives = 72/222 (32%), Gaps = 38/222 (17%)
Query: 220 ESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRN 279
E+G S D+ P LA P P LR GG P TP P PS +G
Sbjct: 1027 ETGGSPDDPPPR----LALGPQP-----SLRGWRGGGPSP-TPGAPSPSH-HGSAGGGGG 1075
Query: 280 SVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFP 339
S P LP A+S VPA RG L K + G G P
Sbjct: 1076 SSQGPALRYFQLPPRAAS-AAMYVPARS--GRGRKGPLVKQTKVEGEPQKGG-----GLP 1127
Query: 340 RA----DPASDRASLFVARTRRSNSSEALLV----------DRAAGGGAGSPPAPLAPSA 385
A PAS + VA NS + R++ G + P P
Sbjct: 1128 PAPSPTSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEP 1187
Query: 386 SGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAA 427
+G S P P PA S P P A PS A
Sbjct: 1188 TGGGGGGGSS-----PSPAPAMSPVPPSPSPVPTPASPSGPA 1224
Score = 31.2 bits (69), Expect = 3.0
Identities = 36/120 (30%), Positives = 42/120 (35%), Gaps = 27/120 (22%)
Query: 379 APLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAAR---------PSSAAPA 429
AP A S+ P S+ + PT SS T PR AR P A
Sbjct: 453 APGAASSGAPGPTSGSQGQSQPSAPTTKLSSGTLRSASSPRGARARSPSRGRHPEDAKRQ 512
Query: 430 SRGAPRLPPVCGDFLLDYSLDRGLPRSG--GGTGWGELPPAAEVPGPLSRRDGLLTMLPG 487
RG P G PR G GGTG G P + G RR L + +PG
Sbjct: 513 PRGRPS--------------SSGTPREGPAGGTG-GSGGPGGSL-GSRGRRRKLYSAVPG 556
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 46.6 bits (109), Expect = 7e-05
Identities = 63/236 (26%), Positives = 77/236 (32%), Gaps = 50/236 (21%)
Query: 358 SNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDP 417
S S+ A+ V + A PPAP P SG + P P P S+ PP P
Sbjct: 555 SLSAAAITVPPSVPSRAPVPPAPPLPGDSGTII---------PPPPAPGDSTTPPPPPPP 605
Query: 418 PRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGT--GWGELPPAAEVPGPL 475
P P P LP ++ P SG T LP +P P
Sbjct: 606 PPPPPPLPGGVCISSPPSLPG-------GTAISPPPPLSGDATIPPPPPLPEGVGIPSPS 658
Query: 476 SRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNP-LL 534
S G T +P PPP+ + P P + P LP EA P P P
Sbjct: 659 SLPGG--TAIPPPPPL-PGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGP 715
Query: 535 WMPPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVG-PPHPPF 589
+PPP P GP P P +G PP PPF
Sbjct: 716 GIPPPPPFP---------------------------GGPGIPPPPPGMGMPPPPPF 744
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,194,156
Number of Sequences: 37866
Number of extensions: 2248507
Number of successful extensions: 16086
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 1121
Number of HSP's that attempted gapping in prelim test: 11657
Number of HSP's gapped (non-prelim): 4467
length of query: 630
length of database: 18,247,518
effective HSP length: 108
effective length of query: 522
effective length of database: 14,157,990
effective search space: 7390470780
effective search space used: 7390470780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.