Guide to the Human Genome
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Name: ST18 Sequence: fasta or formatted (1047aa) NCBI GI: 7662168
Description:

suppression of tumorigenicity 18

Referenced in:

Oligodendrocytes and Myelin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         67           5
 C cysteine            3.0         31           1
 D aspartate           5.7         60           2
 E glutamate           9.2         96           3
 F phenylalanine       2.2         23           1
 G glycine             6.3         66           2
 H histidine           3.2         34           2
 I isoleucine          4.1         43           1
 K lysine              8.0         84           2
 L leucine             8.6         90           2
 M methionine          2.0         21           2
 N asparagine          4.9         51           2
 P proline             6.7         70           2
 Q glutamine           4.1         43           1
 R arginine            4.2         44           2
 S serine              9.8        103           3
 T threonine           5.5         58           1
 V valine              4.0         42           1
 W tryptophan          0.3          3           1
 Y tyrosine            1.7         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   suppression of tumorigenicity 18 
MYT1                  0.386   myelin transcription factor 1 
MYT1L                 0.349   myelin transcription factor 1-like 
L3MBTL                0.018   l(3)mbt-like isoform I 
L3MBTL                0.018   l(3)mbt-like isoform II 
MYST2                 0.011   MYST histone acetyltransferase 2 
L3MBTL4               0.010   l(3)mbt-like 4 
ACRC                  0.010   ACRC protein 
CGNL1                 0.009   cingulin-like 1 
MYH4                  0.008   myosin, heavy polypeptide 4, skeletal muscle 
MYH13                 0.008   myosin, heavy polypeptide 13, skeletal muscle [Homo...
GCC2                  0.007   GRIP and coiled-coil domain-containing 2 
MYH14                 0.007   myosin, heavy chain 14 isoform 1 
MYH14                 0.007   myosin, heavy chain 14 isoform 2 
MYH14                 0.007   myosin, heavy chain 14 isoform 3 
EPS15                 0.007   epidermal growth factor receptor pathway substrate ...
EPS15                 0.007   epidermal growth factor receptor pathway substrate 15...
MYH1                  0.007   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH2                  0.007   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.007   myosin, heavy chain 2, skeletal muscle, adult [Homo...
HMG20B                0.007   high-mobility group 20B 
MYH8                  0.007   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH9                  0.007   myosin, heavy polypeptide 9, non-muscle 
MYH7                  0.006   myosin, heavy chain 7, cardiac muscle, beta 
KIF20B                0.006   M-phase phosphoprotein 1 
MAP4                  0.006   microtubule-associated protein 4 isoform 5 
TPM2                  0.006   tropomyosin 2 (beta) isoform 2 
TPM2                  0.006   tropomyosin 2 (beta) isoform 3 
MYH3                  0.006   myosin, heavy chain 3, skeletal muscle, embryonic [H...
CCHCR1                0.006   coiled-coil alpha-helical rod protein 1 isoform 1 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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