Search of human proteins with 157951704

Search of human proteins with 157951704

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|157951704 Fanconi anemia core complex 100 kDa subunit
isoform a [Homo sapiens]
         (730 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157951704 Fanconi anemia core complex 100 kDa subunit isoform...  1470   0.0  
gi|157951702 Fanconi anemia core complex 100 kDa subunit isoform...  1470   0.0  
gi|239756827 PREDICTED: hypothetical protein [Homo sapiens]            40   0.010
gi|157785645 SPEG complex locus [Homo sapiens]                         35   0.25 
gi|33286446 opioid growth factor receptor [Homo sapiens]               34   0.55 
gi|5032193 TNF receptor-associated factor 1 [Homo sapiens]             32   1.6  
gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapi...    32   1.6  
gi|24497460 Shaw-related voltage-gated potassium channel protein...    32   2.1  
gi|238859651 pleckstrin homology domain containing family A memb...    32   2.7  
gi|21396500 HIRA interacting protein 3 [Homo sapiens]                  32   2.7  
gi|110349719 titin isoform N2-A [Homo sapiens]                         31   3.6  
gi|110349717 titin isoform novex-2 [Homo sapiens]                      31   3.6  
gi|110349713 titin isoform novex-1 [Homo sapiens]                      31   3.6  
gi|110349715 titin isoform N2-B [Homo sapiens]                         31   3.6  
gi|239750117 PREDICTED: hypothetical protein [Homo sapiens]            31   3.6  
gi|239744425 PREDICTED: hypothetical protein XP_002343141 [Homo ...    31   3.6  
gi|221136876 Ras association (RalGDS/AF-6) domain family (N-term...    31   3.6  
gi|219842343 glutamate receptor, metabotropic 5 isoform a precur...    31   4.7  
gi|4504143 glutamate receptor, metabotropic 5 isoform b precurso...    31   4.7  
gi|239750735 PREDICTED: hypothetical protein XP_002347519 [Homo ...    31   4.7  
gi|188536004 zinc finger protein 469 [Homo sapiens]                    31   4.7  
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho...    31   4.7  
gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Ho...    31   4.7  
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho...    31   4.7  
gi|30410798 APG4 autophagy 4 homolog B isoform b [Homo sapiens]        31   4.7  
gi|47132611 APG4 autophagy 4 homolog B isoform a [Homo sapiens]        31   4.7  
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof...    31   4.7  
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof...    31   4.7  
gi|116235466 solute carrier family 25, member 45 isoform b [Homo...    31   4.7  
gi|116235462 solute carrier family 25, member 45 isoform a [Homo...    31   4.7  

>gi|157951704 Fanconi anemia core complex 100 kDa subunit isoform a
           [Homo sapiens]
          Length = 730

 Score = 1470 bits (3805), Expect = 0.0
 Identities = 730/730 (100%), Positives = 730/730 (100%)

Query: 1   MQLFEQPCPGEDPRPGGQIGEVELSSYTPPAGVPGKPAAPHFLPVLCSVSPSGSRVPHDL 60
           MQLFEQPCPGEDPRPGGQIGEVELSSYTPPAGVPGKPAAPHFLPVLCSVSPSGSRVPHDL
Sbjct: 1   MQLFEQPCPGEDPRPGGQIGEVELSSYTPPAGVPGKPAAPHFLPVLCSVSPSGSRVPHDL 60

Query: 61  LGGSGGFTLEDALFGLLFGADATLLQSPVVLCGLPDGQLCCVILKALVTSRSAPGDPNAL 120
           LGGSGGFTLEDALFGLLFGADATLLQSPVVLCGLPDGQLCCVILKALVTSRSAPGDPNAL
Sbjct: 61  LGGSGGFTLEDALFGLLFGADATLLQSPVVLCGLPDGQLCCVILKALVTSRSAPGDPNAL 120

Query: 121 VKILHHLEEPVIFIGALKTEPQAAEAAENFLPDEDVHCDCLVAFGHHGRMLAIKASWDES 180
           VKILHHLEEPVIFIGALKTEPQAAEAAENFLPDEDVHCDCLVAFGHHGRMLAIKASWDES
Sbjct: 121 VKILHHLEEPVIFIGALKTEPQAAEAAENFLPDEDVHCDCLVAFGHHGRMLAIKASWDES 180

Query: 181 GKLVPELREYCLPGPVLCAACGGGGRVYHSTPSDLCVVDLSRGSTPLGPEQPEEGPGGLP 240
           GKLVPELREYCLPGPVLCAACGGGGRVYHSTPSDLCVVDLSRGSTPLGPEQPEEGPGGLP
Sbjct: 181 GKLVPELREYCLPGPVLCAACGGGGRVYHSTPSDLCVVDLSRGSTPLGPEQPEEGPGGLP 240

Query: 241 PMLCPASLNICSVVSLSASPRTHEGGTKLLALSAKGRLMTCSLDLDSEMPGPARMTTESA 300
           PMLCPASLNICSVVSLSASPRTHEGGTKLLALSAKGRLMTCSLDLDSEMPGPARMTTESA
Sbjct: 241 PMLCPASLNICSVVSLSASPRTHEGGTKLLALSAKGRLMTCSLDLDSEMPGPARMTTESA 300

Query: 301 GQKIKELLSGIGNISERVSFLKKAVDQRNKALTSLNEAMNVSCALLSSGTGPRPISCTTS 360
           GQKIKELLSGIGNISERVSFLKKAVDQRNKALTSLNEAMNVSCALLSSGTGPRPISCTTS
Sbjct: 301 GQKIKELLSGIGNISERVSFLKKAVDQRNKALTSLNEAMNVSCALLSSGTGPRPISCTTS 360

Query: 361 TTWSRLQTQDVLMATCVLENSSSFSLDQGWTLCIQVLTSSCALDLDSACSAITYTIPVDQ 420
           TTWSRLQTQDVLMATCVLENSSSFSLDQGWTLCIQVLTSSCALDLDSACSAITYTIPVDQ
Sbjct: 361 TTWSRLQTQDVLMATCVLENSSSFSLDQGWTLCIQVLTSSCALDLDSACSAITYTIPVDQ 420

Query: 421 LGPGARREVTLPLGPGENGGLDLPVTVSCTLFYSLREVVGGALAPSDSEDPFLDECPSDV 480
           LGPGARREVTLPLGPGENGGLDLPVTVSCTLFYSLREVVGGALAPSDSEDPFLDECPSDV
Sbjct: 421 LGPGARREVTLPLGPGENGGLDLPVTVSCTLFYSLREVVGGALAPSDSEDPFLDECPSDV 480

Query: 481 LPEQEGVCLPLSRHTVDMLQCLRFPGLALPHTRAPSPLGPTRDPVATFLETCREPGSQPA 540
           LPEQEGVCLPLSRHTVDMLQCLRFPGLALPHTRAPSPLGPTRDPVATFLETCREPGSQPA
Sbjct: 481 LPEQEGVCLPLSRHTVDMLQCLRFPGLALPHTRAPSPLGPTRDPVATFLETCREPGSQPA 540

Query: 541 GPASLRAEYLPPSVASIKVSAELLRAALKDGHSGVPLCCATLQWLLAENAAVDVVRARAL 600
           GPASLRAEYLPPSVASIKVSAELLRAALKDGHSGVPLCCATLQWLLAENAAVDVVRARAL
Sbjct: 541 GPASLRAEYLPPSVASIKVSAELLRAALKDGHSGVPLCCATLQWLLAENAAVDVVRARAL 600

Query: 601 SSIQGVAPDGANVHLIVREVAMTDLCPAGPIQAVEIQVESSSLADICRAHHAVVGRMQTM 660
           SSIQGVAPDGANVHLIVREVAMTDLCPAGPIQAVEIQVESSSLADICRAHHAVVGRMQTM
Sbjct: 601 SSIQGVAPDGANVHLIVREVAMTDLCPAGPIQAVEIQVESSSLADICRAHHAVVGRMQTM 660

Query: 661 VTEQAAQGSSAPDLRVQYLRQIHANHETLLREVQTLRDRLCTEDEASSCATAQRLLQVYR 720
           VTEQAAQGSSAPDLRVQYLRQIHANHETLLREVQTLRDRLCTEDEASSCATAQRLLQVYR
Sbjct: 661 VTEQAAQGSSAPDLRVQYLRQIHANHETLLREVQTLRDRLCTEDEASSCATAQRLLQVYR 720

Query: 721 QLRHPSLILL 730
           QLRHPSLILL
Sbjct: 721 QLRHPSLILL 730


>gi|157951702 Fanconi anemia core complex 100 kDa subunit isoform b
           [Homo sapiens]
          Length = 881

 Score = 1470 bits (3805), Expect = 0.0
 Identities = 730/730 (100%), Positives = 730/730 (100%)

Query: 1   MQLFEQPCPGEDPRPGGQIGEVELSSYTPPAGVPGKPAAPHFLPVLCSVSPSGSRVPHDL 60
           MQLFEQPCPGEDPRPGGQIGEVELSSYTPPAGVPGKPAAPHFLPVLCSVSPSGSRVPHDL
Sbjct: 152 MQLFEQPCPGEDPRPGGQIGEVELSSYTPPAGVPGKPAAPHFLPVLCSVSPSGSRVPHDL 211

Query: 61  LGGSGGFTLEDALFGLLFGADATLLQSPVVLCGLPDGQLCCVILKALVTSRSAPGDPNAL 120
           LGGSGGFTLEDALFGLLFGADATLLQSPVVLCGLPDGQLCCVILKALVTSRSAPGDPNAL
Sbjct: 212 LGGSGGFTLEDALFGLLFGADATLLQSPVVLCGLPDGQLCCVILKALVTSRSAPGDPNAL 271

Query: 121 VKILHHLEEPVIFIGALKTEPQAAEAAENFLPDEDVHCDCLVAFGHHGRMLAIKASWDES 180
           VKILHHLEEPVIFIGALKTEPQAAEAAENFLPDEDVHCDCLVAFGHHGRMLAIKASWDES
Sbjct: 272 VKILHHLEEPVIFIGALKTEPQAAEAAENFLPDEDVHCDCLVAFGHHGRMLAIKASWDES 331

Query: 181 GKLVPELREYCLPGPVLCAACGGGGRVYHSTPSDLCVVDLSRGSTPLGPEQPEEGPGGLP 240
           GKLVPELREYCLPGPVLCAACGGGGRVYHSTPSDLCVVDLSRGSTPLGPEQPEEGPGGLP
Sbjct: 332 GKLVPELREYCLPGPVLCAACGGGGRVYHSTPSDLCVVDLSRGSTPLGPEQPEEGPGGLP 391

Query: 241 PMLCPASLNICSVVSLSASPRTHEGGTKLLALSAKGRLMTCSLDLDSEMPGPARMTTESA 300
           PMLCPASLNICSVVSLSASPRTHEGGTKLLALSAKGRLMTCSLDLDSEMPGPARMTTESA
Sbjct: 392 PMLCPASLNICSVVSLSASPRTHEGGTKLLALSAKGRLMTCSLDLDSEMPGPARMTTESA 451

Query: 301 GQKIKELLSGIGNISERVSFLKKAVDQRNKALTSLNEAMNVSCALLSSGTGPRPISCTTS 360
           GQKIKELLSGIGNISERVSFLKKAVDQRNKALTSLNEAMNVSCALLSSGTGPRPISCTTS
Sbjct: 452 GQKIKELLSGIGNISERVSFLKKAVDQRNKALTSLNEAMNVSCALLSSGTGPRPISCTTS 511

Query: 361 TTWSRLQTQDVLMATCVLENSSSFSLDQGWTLCIQVLTSSCALDLDSACSAITYTIPVDQ 420
           TTWSRLQTQDVLMATCVLENSSSFSLDQGWTLCIQVLTSSCALDLDSACSAITYTIPVDQ
Sbjct: 512 TTWSRLQTQDVLMATCVLENSSSFSLDQGWTLCIQVLTSSCALDLDSACSAITYTIPVDQ 571

Query: 421 LGPGARREVTLPLGPGENGGLDLPVTVSCTLFYSLREVVGGALAPSDSEDPFLDECPSDV 480
           LGPGARREVTLPLGPGENGGLDLPVTVSCTLFYSLREVVGGALAPSDSEDPFLDECPSDV
Sbjct: 572 LGPGARREVTLPLGPGENGGLDLPVTVSCTLFYSLREVVGGALAPSDSEDPFLDECPSDV 631

Query: 481 LPEQEGVCLPLSRHTVDMLQCLRFPGLALPHTRAPSPLGPTRDPVATFLETCREPGSQPA 540
           LPEQEGVCLPLSRHTVDMLQCLRFPGLALPHTRAPSPLGPTRDPVATFLETCREPGSQPA
Sbjct: 632 LPEQEGVCLPLSRHTVDMLQCLRFPGLALPHTRAPSPLGPTRDPVATFLETCREPGSQPA 691

Query: 541 GPASLRAEYLPPSVASIKVSAELLRAALKDGHSGVPLCCATLQWLLAENAAVDVVRARAL 600
           GPASLRAEYLPPSVASIKVSAELLRAALKDGHSGVPLCCATLQWLLAENAAVDVVRARAL
Sbjct: 692 GPASLRAEYLPPSVASIKVSAELLRAALKDGHSGVPLCCATLQWLLAENAAVDVVRARAL 751

Query: 601 SSIQGVAPDGANVHLIVREVAMTDLCPAGPIQAVEIQVESSSLADICRAHHAVVGRMQTM 660
           SSIQGVAPDGANVHLIVREVAMTDLCPAGPIQAVEIQVESSSLADICRAHHAVVGRMQTM
Sbjct: 752 SSIQGVAPDGANVHLIVREVAMTDLCPAGPIQAVEIQVESSSLADICRAHHAVVGRMQTM 811

Query: 661 VTEQAAQGSSAPDLRVQYLRQIHANHETLLREVQTLRDRLCTEDEASSCATAQRLLQVYR 720
           VTEQAAQGSSAPDLRVQYLRQIHANHETLLREVQTLRDRLCTEDEASSCATAQRLLQVYR
Sbjct: 812 VTEQAAQGSSAPDLRVQYLRQIHANHETLLREVQTLRDRLCTEDEASSCATAQRLLQVYR 871

Query: 721 QLRHPSLILL 730
           QLRHPSLILL
Sbjct: 872 QLRHPSLILL 881


>gi|239756827 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 332

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 422 GPGARREVTLPLGPGENGGLDLPVTVSCTLFYSLREVVGGALAPSDSED--PFLDECPSD 479
           GP +     L LGPG    LDL +    T   +LRE +GG  A +D+ D  P LD+  S 
Sbjct: 264 GPNSGVGRGLGLGPGSRAHLDLLIRGDSTED-NLREALGGKHAEADATDDPPILDQGQSL 322

Query: 480 VLPEQEG 486
           VLP++EG
Sbjct: 323 VLPKREG 329


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 40/148 (27%), Positives = 55/148 (37%), Gaps = 37/148 (25%)

Query: 409  CSAITYTIPVDQLGPGARREVTLPLGPGENGGLDLPVTVSCTLFYSLREVVGGALAPSDS 468
            C  +   IP     P  R  VT+P  P  +GGL                      + SDS
Sbjct: 1886 CHLVLRPIPELLRAPPERVWVTMPRRPPPSGGLS---------------------SSSDS 1924

Query: 469  EDPFLDECPS---DVLPEQEGVCLPLSRHTVDMLQCLRFPGLALPHTRAPSPL------- 518
            E+  L+E PS    + PE  G  + L+    +         L  P T A +P+       
Sbjct: 1925 EEEELEELPSVPRPLQPEFSGSRVSLTDIPTE------DEALGTPETGAATPMDWQEQGR 1978

Query: 519  GPTRDPVATFLETCREPGSQPAGPASLR 546
             P++D  A   E    PG +PA  AS R
Sbjct: 1979 APSQDQEAPSPEALPSPGQEPAAGASPR 2006


>gi|33286446 opioid growth factor receptor [Homo sapiens]
          Length = 677

 Score = 33.9 bits (76), Expect = 0.55
 Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 4/40 (10%)

Query: 505 PGLALPHTRAPSPLGPTRD-PVATFLETCREPGSQPAGPA 543
           P  +   T  PSP GPTRD P  +  ET   PG +PAGPA
Sbjct: 574 PAESPSETPGPSPAGPTRDEPAESPSET---PGPRPAGPA 610


>gi|5032193 TNF receptor-associated factor 1 [Homo sapiens]
          Length = 416

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 14/95 (14%)

Query: 221 SRGSTPLGPEQPEEGPGGLPPMLCPASLN---ICSVVSLSASPRTHEGGTKLLALSAKGR 277
           S GS+P       E P G PP +C        +C    LS +PR    G   +    +G 
Sbjct: 4   SSGSSPRPAPDENEFPFGCPPTVCQDPKEPRALCCAGCLSENPR---NGEDQICPKCRGE 60

Query: 278 LMTCSLDLDSEMPGPARMTTESAGQKIKELLSGIG 312
                 DL S  PG    T E A  ++ E  +GIG
Sbjct: 61  ------DLQSISPGSRLRTQEKAHPEVAE--AGIG 87


>gi|157738667 FYVE and coiled-coil domain containing 1 [Homo
           sapiens]
          Length = 1478

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 40/187 (21%), Positives = 83/187 (44%), Gaps = 7/187 (3%)

Query: 537 SQPAGPASLR--AEYLPPSVASIKVSAELLRAALKDGHSGVPLC---CATLQWLLAENAA 591
           S  A  AS+R   + +  S+ +++ + E ++A + +  + +      C  L+  + +   
Sbjct: 662 SLEAEQASIRHLGDQMEASLLAVRKAKEAMKAQMAEKEAILQSKEGECQQLREEVEQCQQ 721

Query: 592 VDVVRARALSSIQGVAPDGAN-VHLIVREVAMTDLCPAGPIQAVEIQVESSSLADICRAH 650
           +   R R L +++         + ++  E     + P    +A E+  + +        H
Sbjct: 722 LAEARHRELRALESQCQQQTQLIEVLTAEKGQQGVGPPTDNEARELAAQLALSQAQLEVH 781

Query: 651 HAVVGRMQTMVTEQAAQGSSAPDLRVQYLRQIHANHETLLREVQTLRDRLCTEDEASSCA 710
              V R+Q  V +  A+  +A D + +   Q+ +  E +LRE +TL  +L  ++EA + A
Sbjct: 782 QGEVQRLQAQVVDLQAKMRAALDDQDKVQSQL-SMAEAVLREHKTLVQQLKEQNEALNRA 840

Query: 711 TAQRLLQ 717
             Q LLQ
Sbjct: 841 HVQELLQ 847


>gi|24497460 Shaw-related voltage-gated potassium channel protein 3
           [Homo sapiens]
          Length = 757

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 226 PLGPEQPEEGPGGL--PPMLCPASLNICSVVSLSASPRTHEG 265
           P  P  P  G GG+  PP + P S+ +    +  A P TH G
Sbjct: 581 PPPPPHPHHGSGGISPPPPITPPSMGVTVAGAYPAGPHTHPG 622


>gi|238859651 pleckstrin homology domain containing family A member
           4 isoform 1 [Homo sapiens]
          Length = 779

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 37/134 (27%), Positives = 53/134 (39%), Gaps = 17/134 (12%)

Query: 220 LSRGSTPL-GPEQPEEGPGGLPPMLCPASLNICSVVSLSASPRT--HEGGTKLLALSAKG 276
           LSR  TP  GP  P E  GG PP          S    S  PRT  H G    L L  + 
Sbjct: 291 LSRPPTPRRGP--PSEAGGGKPPR---------SPQHWSQEPRTQAHSGSPTYLQLPPRP 339

Query: 277 RLMTCSLDLDSEMPGPARMTTESAGQKIKELLSGIGNISERVSFLKKAVDQRNKALTSLN 336
                S+ L   +PGP   +T     +   LL+ +      +  L++ +DQ+ +    L 
Sbjct: 340 PGTRASMVL---LPGPPLESTFHQSLETDTLLTKLCGQDRLLRRLQEEIDQKQEEKEQLE 396

Query: 337 EAMNVSCALLSSGT 350
            A+ ++   L   T
Sbjct: 397 AALELTRQQLGQAT 410


>gi|21396500 HIRA interacting protein 3 [Homo sapiens]
          Length = 556

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 17/48 (35%), Positives = 24/48 (50%)

Query: 246 ASLNICSVVSLSASPRTHEGGTKLLALSAKGRLMTCSLDLDSEMPGPA 293
           ASL++ +++S S  PR       L   +  G L   +LD D E P PA
Sbjct: 491 ASLDVANIISGSGRPRRRTAWNPLGEAAPPGELYRRTLDSDEERPRPA 538


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 195   PVLCAACGGGGRVYHSTPSDLCVVDLSRGSTPLGPEQPEEGPGGLPPMLCPASLNICSVV 254
             P L   C    RV  S  +++ + D S  S P+  + P   P   PP+   A    C+ V
Sbjct: 17074 PDLLEGCQYEFRV--SAENEIGIGDPSPPSKPVFAKDPIAKPS--PPVNPEAIDTTCNSV 17129

Query: 255   SLSASPRTHEGGTKLL 270
              L+  P  H+GG+K+L
Sbjct: 17130 DLTWQPPRHDGGSKIL 17145


>gi|110349717 titin isoform novex-2 [Homo sapiens]
          Length = 27118

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 195   PVLCAACGGGGRVYHSTPSDLCVVDLSRGSTPLGPEQPEEGPGGLPPMLCPASLNICSVV 254
             P L   C    RV  S  +++ + D S  S P+  + P   P   PP+   A    C+ V
Sbjct: 10769 PDLLEGCQYEFRV--SAENEIGIGDPSPPSKPVFAKDPIAKPS--PPVNPEAIDTTCNSV 10824

Query: 255   SLSASPRTHEGGTKLL 270
              L+  P  H+GG+K+L
Sbjct: 10825 DLTWQPPRHDGGSKIL 10840


>gi|110349713 titin isoform novex-1 [Homo sapiens]
          Length = 27051

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 195   PVLCAACGGGGRVYHSTPSDLCVVDLSRGSTPLGPEQPEEGPGGLPPMLCPASLNICSVV 254
             P L   C    RV  S  +++ + D S  S P+  + P   P   PP+   A    C+ V
Sbjct: 10702 PDLLEGCQYEFRV--SAENEIGIGDPSPPSKPVFAKDPIAKPS--PPVNPEAIDTTCNSV 10757

Query: 255   SLSASPRTHEGGTKLL 270
              L+  P  H+GG+K+L
Sbjct: 10758 DLTWQPPRHDGGSKIL 10773


>gi|110349715 titin isoform N2-B [Homo sapiens]
          Length = 26926

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 195   PVLCAACGGGGRVYHSTPSDLCVVDLSRGSTPLGPEQPEEGPGGLPPMLCPASLNICSVV 254
             P L   C    RV  S  +++ + D S  S P+  + P   P   PP+   A    C+ V
Sbjct: 10577 PDLLEGCQYEFRV--SAENEIGIGDPSPPSKPVFAKDPIAKPS--PPVNPEAIDTTCNSV 10632

Query: 255   SLSASPRTHEGGTKLL 270
              L+  P  H+GG+K+L
Sbjct: 10633 DLTWQPPRHDGGSKIL 10648


>gi|239750117 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 314

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 2  QLFEQPCPGEDPRPGGQIGEVELSSYTPPAGVPGKPAAPHFLPVLCSVSPSG 53
          Q   +PC     R  G    + + S  PPA +P +P  P  L  LC  SP G
Sbjct: 42 QGLREPCSEAHSRAAGLKSSLPVLSCPPPATIPPRP-EPTLLTGLCPSSPHG 92


>gi|239744425 PREDICTED: hypothetical protein XP_002343141 [Homo
          sapiens]
          Length = 228

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 2  QLFEQPCPGEDPRPGGQIGEVELSSYTPPAGVPGKPAAPHFLPVLCSVSPSG 53
          Q   +PC     R  G    + + S  PPA +P +P  P  L  LC  SP G
Sbjct: 42 QGLREPCSEAHSRAAGLRSSLPVLSCPPPATIPPRP-EPTLLTGLCPSSPHG 92


>gi|221136876 Ras association (RalGDS/AF-6) domain family
           (N-terminal) member 7 isoform 3 [Homo sapiens]
          Length = 320

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 17/122 (13%)

Query: 259 SPRTHEGGTKLLALSAKGRLMTCSLDLDSEMPG---PARMTTESAGQKI-------KELL 308
           S  T E   +L AL A+ R +   L L +E PG   P    TE   Q +        E+ 
Sbjct: 197 SAATAEHAARLQALDAQARALEAELQLAAEAPGPPSPMASATERLHQDLAVQERQSAEVQ 256

Query: 309 SGIGNISERVSFLKKAVDQRNKALTSLNEAM---NVSCALLSSGTG----PRPISCTTST 361
             +  +S  +   ++A+  + + L  LN  +   N+   +  +G      PRP      T
Sbjct: 257 GSLALVSRALEAAERALQAQAQELEELNRELRQCNLQQFIQQTGAALPPPPRPDRGPPGT 316

Query: 362 TW 363
            W
Sbjct: 317 QW 318


>gi|219842343 glutamate receptor, metabotropic 5 isoform a precursor
            [Homo sapiens]
          Length = 1212

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 16/155 (10%)

Query: 223  GSTPLGPEQPEEGPGGLPPMLCPASLNICSVVSLSASPRTHEGGTKLLALSAK-GRLMTC 281
            G+ P GPE P+ GP  L         ++        +P      + +  LS + G     
Sbjct: 984  GAGPGGPESPDAGPKAL--------YDVAEAEEHFPAPARPRSPSPISTLSHRAGSASRT 1035

Query: 282  SLDLDSEMPGPARMTTESAGQKIKELLSGIGNISERVSFLKKAVDQRNKALTSLNEAMNV 341
              D+ S    P   ++ S G  ++++ S +   +  +S L   +      L++   +  V
Sbjct: 1036 DDDVPSLHSEPVARSSSSQGSLMEQISSVVTRFTANISELNSMM------LSTAAPSPGV 1089

Query: 342  SCALLSSGTGPRPISC-TTSTTWSRLQTQDVLMAT 375
               L SS   P+ I   TT TT++ +Q    +  T
Sbjct: 1090 GAPLCSSYLIPKEIQLPTTMTTFAEIQPLPAIEVT 1124


>gi|4504143 glutamate receptor, metabotropic 5 isoform b precursor
            [Homo sapiens]
          Length = 1180

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 16/155 (10%)

Query: 223  GSTPLGPEQPEEGPGGLPPMLCPASLNICSVVSLSASPRTHEGGTKLLALSAK-GRLMTC 281
            G+ P GPE P+ GP  L         ++        +P      + +  LS + G     
Sbjct: 952  GAGPGGPESPDAGPKAL--------YDVAEAEEHFPAPARPRSPSPISTLSHRAGSASRT 1003

Query: 282  SLDLDSEMPGPARMTTESAGQKIKELLSGIGNISERVSFLKKAVDQRNKALTSLNEAMNV 341
              D+ S    P   ++ S G  ++++ S +   +  +S L   +      L++   +  V
Sbjct: 1004 DDDVPSLHSEPVARSSSSQGSLMEQISSVVTRFTANISELNSMM------LSTAAPSPGV 1057

Query: 342  SCALLSSGTGPRPISC-TTSTTWSRLQTQDVLMAT 375
               L SS   P+ I   TT TT++ +Q    +  T
Sbjct: 1058 GAPLCSSYLIPKEIQLPTTMTTFAEIQPLPAIEVT 1092


>gi|239750735 PREDICTED: hypothetical protein XP_002347519 [Homo
           sapiens]
          Length = 426

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 7/90 (7%)

Query: 325 VDQRNKALTSLNEAMNVSCALLSSGTGPRPISC-TTSTTWSRLQTQ-DVLMATCVLENSS 382
           +D     L + +  ++ SC+ L +      +SC T   + S L     +L A+C + + S
Sbjct: 177 LDASRSMLDASSSTLDASCSTLDASCSTLDVSCYTLDASCSTLDASCSILDASCSMLDIS 236

Query: 383 SFSLDQGWTLCIQVLTSSCALDLDSACSAI 412
             +LD   ++    L +SC++ LD++CS +
Sbjct: 237 CSTLDAPCSM----LDASCSM-LDASCSML 261


>gi|188536004 zinc finger protein 469 [Homo sapiens]
          Length = 3925

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 223 GSTPL--GPEQPEEGPGGLPPMLCPASLNICSVVSLSASPRTHEGGTKLLALSAKGRLMT 280
           G+ PL  G  QP+  P G P +  P  +      S   SP T+  G+   +LS       
Sbjct: 557 GAQPLFFGVAQPQVSPHGTPSLPPPRVVGASPSESPLPSPATNTAGSTCSSLSPMSSSPA 616

Query: 281 CSLDLDSEMPGP 292
                +S++PGP
Sbjct: 617 NPSSEESQLPGP 628


>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
            sapiens]
          Length = 1751

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 11/56 (19%)

Query: 13   PRPGGQIGEVELSSYTPPAGVPGKPAAPHFLPVLCSVSPSGSRVP--HDLLGGSGG 66
            P P G  GE  L+    PAG PG P  P          P G  +P   D + GSGG
Sbjct: 988  PGPAGARGESGLAGAPGPAGPPGPPGPP---------GPPGPGLPAGFDDMEGSGG 1034


>gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Homo
           sapiens]
          Length = 1336

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 11/56 (19%)

Query: 13  PRPGGQIGEVELSSYTPPAGVPGKPAAPHFLPVLCSVSPSGSRVP--HDLLGGSGG 66
           P P G  GE  L+    PAG PG P  P          P G  +P   D + GSGG
Sbjct: 573 PGPAGARGESGLAGAPGPAGPPGPPGPP---------GPPGPGLPAGFDDMEGSGG 619


>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
           sapiens]
          Length = 1516

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 11/56 (19%)

Query: 13  PRPGGQIGEVELSSYTPPAGVPGKPAAPHFLPVLCSVSPSGSRVP--HDLLGGSGG 66
           P P G  GE  L+    PAG PG P  P          P G  +P   D + GSGG
Sbjct: 753 PGPAGARGESGLAGAPGPAGPPGPPGPP---------GPPGPGLPAGFDDMEGSGG 799


>gi|30410798 APG4 autophagy 4 homolog B isoform b [Homo sapiens]
          Length = 380

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 115 GDPNALVKILHHLEEPVIFIGALKTEPQAAEAAENFLPDEDVHC 158
           G PN+    + ++ E +I++    T+P        F+PDE  HC
Sbjct: 258 GKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFHC 301


>gi|47132611 APG4 autophagy 4 homolog B isoform a [Homo sapiens]
          Length = 393

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 115 GDPNALVKILHHLEEPVIFIGALKTEPQAAEAAENFLPDEDVHC 158
           G PN+    + ++ E +I++    T+P        F+PDE  HC
Sbjct: 258 GKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFHC 301


>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
            [Homo sapiens]
          Length = 6907

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)

Query: 525  VATFLETCREPGSQPAGPASLRAEYLPPSVASIKVSAELLRAALKDGHS 573
            VA  LETC++ G    G     AE L   + ++K + E ++  L++ HS
Sbjct: 4290 VAFLLETCKDQGLGDNGATQHEAEALSLKLKTVKCNLEKVQMMLQEKHS 4338


>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
            [Homo sapiens]
          Length = 6885

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)

Query: 525  VATFLETCREPGSQPAGPASLRAEYLPPSVASIKVSAELLRAALKDGHS 573
            VA  LETC++ G    G     AE L   + ++K + E ++  L++ HS
Sbjct: 4290 VAFLLETCKDQGLGDNGATQHEAEALSLKLKTVKCNLEKVQMMLQEKHS 4338


>gi|116235466 solute carrier family 25, member 45 isoform b [Homo
           sapiens]
          Length = 246

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 17/51 (33%), Positives = 22/51 (43%)

Query: 21  EVELSSYTPPAGVPGKPAAPHFLPVLCSVSPSGSRVPHDLLGGSGGFTLED 71
           +V L + T P   PG P   +  PV C+ S      P  L  G+   TL D
Sbjct: 82  KVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRD 132


>gi|116235462 solute carrier family 25, member 45 isoform a [Homo
           sapiens]
          Length = 288

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 17/51 (33%), Positives = 22/51 (43%)

Query: 21  EVELSSYTPPAGVPGKPAAPHFLPVLCSVSPSGSRVPHDLLGGSGGFTLED 71
           +V L + T P   PG P   +  PV C+ S      P  L  G+   TL D
Sbjct: 124 KVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRD 174


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,546,846
Number of Sequences: 37866
Number of extensions: 1857590
Number of successful extensions: 6368
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 6267
Number of HSP's gapped (non-prelim): 128
length of query: 730
length of database: 18,247,518
effective HSP length: 110
effective length of query: 620
effective length of database: 14,082,258
effective search space: 8730999960
effective search space used: 8730999960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.