Guide to the Human Genome
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Name: RASSF7 Sequence: fasta or formatted (320aa) NCBI GI: 221136876
Description:

Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 isoform 3

Referenced in:

Ras

Other entries for this name:
alt prot [337aa] Ras association (RalGDS/AF-6) domain family (N-terminal) member 7...
alt prot [373aa] Ras association (RalGDS/AF-6) domain family (N-terminal) member 7...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.4         46           2
 C cysteine            3.1         10           2
 D aspartate           2.2          7           1
 E glutamate           9.7         31           2
 F phenylalanine       1.6          5           1
 G glycine             6.2         20           1
 H histidine           0.9          3           1
 I isoleucine          1.6          5           1
 K lysine              1.2          4           1
 L leucine            12.2         39           2
 M methionine          0.9          3           1
 N asparagine          0.9          3           1
 P proline             9.7         31           4
 Q glutamine          10.0         32           2
 R arginine            9.7         31           2
 S serine              4.7         15           2
 T threonine           4.4         14           2
 V valine              5.6         18           2
 W tryptophan          0.9          3           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras association (RalGDS/AF-6) domain family (N-term... 
RASSF7                0.989   Ras association (RalGDS/AF-6) domain family (N-termin...
RASSF7                0.985   Ras association (RalGDS/AF-6) domain family (N-term...
RASSF8                0.257   Ras association (RalGDS/AF-6) domain family (N-termi...
GCC1                  0.036   Golgi coiled-coil protein 1 
GOLGA1                0.036   golgin 97 
CEP250                0.031   centrosomal protein 2 
ARHGEF18              0.029   Rho/Rac guanine nucleotide exchange factor 18 isofo...
ARHGEF18              0.029   Rho/Rac guanine nucleotide exchange factor 18 isofor...
PLEC1                 0.029   plectin 1 isoform 11 
PLEC1                 0.029   plectin 1 isoform 10 
PLEC1                 0.029   plectin 1 isoform 8 
PLEC1                 0.029   plectin 1 isoform 7 
PLEC1                 0.029   plectin 1 isoform 6 
PLEC1                 0.029   plectin 1 isoform 3 
PLEC1                 0.029   plectin 1 isoform 2 
PLEC1                 0.029   plectin 1 isoform 1 
CCDC88B               0.028   coiled-coil domain containing 88 
CROCC                 0.026   ciliary rootlet coiled-coil 
MYH11                 0.026   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.026   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.026   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.026   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
SYNM                  0.026   desmuslin isoform B 
SYNM                  0.026   desmuslin isoform A 
EPS15L1               0.026   epidermal growth factor receptor pathway substrate 1...
MAP7D1                0.026   MAP7 domain containing 1 
MYH10                 0.026   myosin, heavy polypeptide 10, non-muscle 
MYH7B                 0.025   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
INA                   0.025   internexin neuronal intermediate filament protein, a...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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