TRAF1 31559

Name: TRAF1	Sequence: fasta or formatted (416aa)		NCBI GI: 5032193
Description: TNF receptor-associated factor 1		Referenced in: TNF and Related Signals
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 32 2 C cysteine 4.1 17 2 D aspartate 4.1 17 2 E glutamate 8.4 35 2 F phenylalanine 4.6 19 2 G glycine 6.2 26 1 H histidine 2.4 10 1 I isoleucine 2.6 11 1 K lysine 5.0 21 1 L leucine 12.0 50 3 M methionine 1.9 8 1 N asparagine 3.1 13 2 P proline 5.8 24 2 Q glutamine 6.0 25 2 R arginine 5.5 23 2 S serine 8.7 36 3 T threonine 4.3 18 1 V valine 5.0 21 2 W tryptophan 0.7 3 1 Y tyrosine 1.7 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TNF receptor-associated factor 1 TRAF2 0.305 TNF receptor-associated factor 2 TRAF3 0.251 TNF receptor-associated factor 3 isoform 1 TRAF3 0.251 TNF receptor-associated factor 3 isoform 1 TRAF3 0.228 TNF receptor-associated factor 3 isoform 2 TRAF5 0.227 TNF receptor-associated factor 5 TRAF5 0.227 TNF receptor-associated factor 5 TRAF5 0.227 TNF receptor-associated factor 5 TRAF4 0.126 TNF receptor-associated factor 4 TRAF6 0.098 TNF receptor-associated factor 6 TRAF6 0.098 TNF receptor-associated factor 6 MEP1A 0.017 meprin A alpha LRRC45 0.015 leucine rich repeat containing 45 CCDC46 0.015 coiled-coil domain containing 46 isoform a CEP250 0.013 centrosomal protein 2 MYH6 0.013 myosin heavy chain 6 TRIP11 0.013 thyroid hormone receptor interactor 11 CCDC18 0.013 sarcoma antigen NY-SAR-41 RUFY2 0.013 RUN and FYVE domain-containing 2 isoform a GOLGA6D 0.012 golgi autoantigen, golgin subfamily a, 6D MYH7 0.012 myosin, heavy chain 7, cardiac muscle, beta GOLGA6C 0.012 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... KIFC3 0.012 kinesin family member C3 isoform 2 KIFC3 0.012 kinesin family member C3 isoform 3 KIFC3 0.012 kinesin family member C3 isoform 1 FHAD1 0.012 forkhead-associated (FHA) phosphopeptide binding do... GOLGA6 0.012 golgi autoantigen, golgin subfamily a, 6 MYO18B 0.012 myosin XVIIIB ZNF853 0.012 zinc finger protein 853 LRRFIP2 0.012 leucine rich repeat (in FLII) interacting protein 2 i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.