Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FBXO10 Sequence: fasta or formatted (956aa) NCBI GI: 124244083
Description:

F-box protein 10

Referenced in:

Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         54           2
 C cysteine            2.8         27           1
 D aspartate           4.0         38           2
 E glutamate           5.9         56           2
 F phenylalanine       3.2         31           1
 G glycine             9.6         92           3
 H histidine           2.9         28           2
 I isoleucine          7.0         67           2
 K lysine              4.5         43           3
 L leucine             8.9         85           2
 M methionine          1.4         13           2
 N asparagine          6.5         62           2
 P proline             4.4         42           2
 Q glutamine           4.0         38           2
 R arginine            6.3         60           4
 S serine              8.7         83           3
 T threonine           4.0         38           2
 V valine              6.6         63           3
 W tryptophan          1.4         13           1
 Y tyrosine            2.4         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box protein 10 
FBXO11                0.074   F-box only protein 11 isoform 1 
FBXO11                0.067   F-box only protein 11 isoform 2 
FBXO11                0.060   F-box only protein 11 isoform 3 
FBXO45                0.008   F-box protein 45 
SHCBP1                0.008   SHC SH2-domain binding protein 1 
FBXO48                0.006   F-box protein 48 
FBXL20                0.005   F-box and leucine-rich repeat protein 20 
DSPP                  0.005   dentin sialophosphoprotein preproprotein 
C7orf49               0.005   modulator of retrovirus infection 
FBXL2                 0.005   F-box and leucine-rich repeat protein 2 
FBXW8                 0.005   F-box and WD repeat domain containing 8 isoform 2 [H...
FBXW8                 0.005   F-box and WD repeat domain containing 8 isoform 1 [H...
C1orf14               0.005   chromosome 1 open reading frame 14 
NCOA3                 0.005   nuclear receptor coactivator 3 isoform a 
NCOA3                 0.005   nuclear receptor coactivator 3 isoform b 
TP53BP1               0.004   tumor protein p53 binding protein 1 isoform 1 [Homo...
TP53BP1               0.004   tumor protein p53 binding protein 1 isoform 2 [Homo...
TP53BP1               0.004   tumor protein p53 binding protein 1 isoform 3 
IQSEC3                0.004   IQ motif and Sec7 domain 3 
SKI                   0.004   v-ski sarcoma viral oncogene homolog 
NR2F2                 0.004   nuclear receptor subfamily 2, group F, member 2 isof...
C19orf29              0.004   chromosome 19 open reading frame 29 
C19orf29              0.004   chromosome 19 open reading frame 29 
PARD6G                0.004   PAR-6 gamma protein 
RNF157                0.004   ring finger protein 157 
SKP2                  0.004   S-phase kinase-associated protein 2 isoform 1 
SKP2                  0.004   S-phase kinase-associated protein 2 isoform 2 
NBEAL2                0.003   neurobeachin-like 2 
PPM1B                 0.003   protein phosphatase 1B isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press