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Search of human proteins with 157739940
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157739940 nudix (nucleoside diphosphate linked moiety
X)-type motif 19 [Homo sapiens]
(375 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157739940 nudix (nucleoside diphosphate linked moiety X)-type... 793 0.0
gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapi... 34 0.19
gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapi... 34 0.19
gi|8923582 zinc finger protein 446 [Homo sapiens] 33 0.32
gi|77681565 NG5 protein [Homo sapiens] 33 0.55
gi|144226847 obscurin-like 1 [Homo sapiens] 32 0.71
gi|113428456 PREDICTED: similar to mCG141871 [Homo sapiens] 32 0.71
gi|113428072 PREDICTED: similar to mCG141871 [Homo sapiens] 32 0.71
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 32 0.71
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 32 0.71
gi|7706501 WW domain binding protein 11 [Homo sapiens] 32 0.71
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 32 0.93
gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4 ... 32 1.2
gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2 ... 32 1.2
gi|239757128 PREDICTED: similar to mCG141871 [Homo sapiens] 32 1.2
gi|12597625 activating transcription factor 5 [Homo sapiens] 32 1.2
gi|28558977 mediator complex subunit 26 [Homo sapiens] 32 1.2
gi|21359951 RNA binding motif protein 42 [Homo sapiens] 32 1.2
gi|21735550 mitogen-activated protein kinase kinase kinase 10 [H... 32 1.2
gi|21362070 hypothetical protein LOC79034 [Homo sapiens] 32 1.2
gi|239749959 PREDICTED: hypothetical protein [Homo sapiens] 31 1.6
gi|33457350 OTU domain containing 5 isoform a [Homo sapiens] 31 1.6
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] 31 1.6
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens] 31 1.6
gi|4885243 FOS-like antigen 1 [Homo sapiens] 31 2.1
gi|116734689 socius isoform 3 [Homo sapiens] 31 2.1
gi|116734681 socius isoform 1 [Homo sapiens] 31 2.1
gi|116734679 socius isoform 2 [Homo sapiens] 31 2.1
gi|148276998 zinc finger protein 628 [Homo sapiens] 31 2.1
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 30 2.7
>gi|157739940 nudix (nucleoside diphosphate linked moiety X)-type
motif 19 [Homo sapiens]
Length = 375
Score = 793 bits (2047), Expect = 0.0
Identities = 375/375 (100%), Positives = 375/375 (100%)
Query: 1 MSSSLRPGPSRWRRAASIVLAAGWSRPETATPPSRPPPAEGFRLLLLQRSPHQGFMPGAH 60
MSSSLRPGPSRWRRAASIVLAAGWSRPETATPPSRPPPAEGFRLLLLQRSPHQGFMPGAH
Sbjct: 1 MSSSLRPGPSRWRRAASIVLAAGWSRPETATPPSRPPPAEGFRLLLLQRSPHQGFMPGAH 60
Query: 61 VFSGGVLDAADRSADWLGLFAPHHGPPRFGLGPAPFSRTAFPSLPDTDDHKTDNTGTLPE 120
VFSGGVLDAADRSADWLGLFAPHHGPPRFGLGPAPFSRTAFPSLPDTDDHKTDNTGTLPE
Sbjct: 61 VFSGGVLDAADRSADWLGLFAPHHGPPRFGLGPAPFSRTAFPSLPDTDDHKTDNTGTLPE 120
Query: 121 DVAFRICAVREAFEEAGVLLLRPRTSPPGPAPGPGLALEPPPGLASWRDRVRQDPRHFLR 180
DVAFRICAVREAFEEAGVLLLRPRTSPPGPAPGPGLALEPPPGLASWRDRVRQDPRHFLR
Sbjct: 121 DVAFRICAVREAFEEAGVLLLRPRTSPPGPAPGPGLALEPPPGLASWRDRVRQDPRHFLR 180
Query: 181 LCAHLDCTPDIWALHNWSAWLTPFLRGTTRRFDTAFFLCCLREPPPVYPDLAEVVGYQWS 240
LCAHLDCTPDIWALHNWSAWLTPFLRGTTRRFDTAFFLCCLREPPPVYPDLAEVVGYQWS
Sbjct: 181 LCAHLDCTPDIWALHNWSAWLTPFLRGTTRRFDTAFFLCCLREPPPVYPDLAEVVGYQWS 240
Query: 241 SPSEATESFLSKEIWLPPPQFYEVRRLANFASLSDLHKFCLGRALEGLERWLPIILLTAD 300
SPSEATESFLSKEIWLPPPQFYEVRRLANFASLSDLHKFCLGRALEGLERWLPIILLTAD
Sbjct: 241 SPSEATESFLSKEIWLPPPQFYEVRRLANFASLSDLHKFCLGRALEGLERWLPIILLTAD 300
Query: 301 GMVHLLPGDELYLEDSDFLENLMSTEKKTEEIMKEGKQFHRIVTYHRHLYDIHVTVQPKY 360
GMVHLLPGDELYLEDSDFLENLMSTEKKTEEIMKEGKQFHRIVTYHRHLYDIHVTVQPKY
Sbjct: 301 GMVHLLPGDELYLEDSDFLENLMSTEKKTEEIMKEGKQFHRIVTYHRHLYDIHVTVQPKY 360
Query: 361 KHVYPKNSVVRKSHL 375
KHVYPKNSVVRKSHL
Sbjct: 361 KHVYPKNSVVRKSHL 375
>gi|224282119 splicing factor, arginine/serine-rich 14 [Homo
sapiens]
Length = 1082
Score = 34.3 bits (77), Expect = 0.19
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 19/182 (10%)
Query: 83 HHGPPRFGLGPAPFSRTAFPSLPDTDDH----KTDNTGTLPEDVAFRICAVREAFEEAGV 138
HHG GL A PSLPD +D D G P+D + A + + AGV
Sbjct: 712 HHGRQAPGLSQAK------PSLPDRNDAAKDCPPDPVGPSPQDPSLE--ASGPSPKPAGV 763
Query: 139 -LLLRPRTSPPGPAPGPGL-ALEPPPGLASWRDRVRQDPRHFLRLCAHLDCTPDIWALHN 196
+ P+TS P P+ + +E LA + +V + F + PD+W LH+
Sbjct: 764 DISEAPQTSSPCPSADIDMKTMETAEKLARFVAQVGPEIEQF--SIENSTDNPDLWFLHD 821
Query: 197 WSAWLTPFLRGTTRRFDTAFFLCCLREPPPVYPDLAEVVGYQWSSPSEATESFLSKEIWL 256
++ F R + F+ +C P ++ + G Q SP + E E
Sbjct: 822 QNSSAFKFYR--KKVFELCPSICFTSSPHNLHTGGGDTTGSQ-ESPVDLMEGEAEFEDEP 878
Query: 257 PP 258
PP
Sbjct: 879 PP 880
>gi|224282117 splicing factor, arginine/serine-rich 14 [Homo
sapiens]
Length = 1082
Score = 34.3 bits (77), Expect = 0.19
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 19/182 (10%)
Query: 83 HHGPPRFGLGPAPFSRTAFPSLPDTDDH----KTDNTGTLPEDVAFRICAVREAFEEAGV 138
HHG GL A PSLPD +D D G P+D + A + + AGV
Sbjct: 712 HHGRQAPGLSQAK------PSLPDRNDAAKDCPPDPVGPSPQDPSLE--ASGPSPKPAGV 763
Query: 139 -LLLRPRTSPPGPAPGPGL-ALEPPPGLASWRDRVRQDPRHFLRLCAHLDCTPDIWALHN 196
+ P+TS P P+ + +E LA + +V + F + PD+W LH+
Sbjct: 764 DISEAPQTSSPCPSADIDMKTMETAEKLARFVAQVGPEIEQF--SIENSTDNPDLWFLHD 821
Query: 197 WSAWLTPFLRGTTRRFDTAFFLCCLREPPPVYPDLAEVVGYQWSSPSEATESFLSKEIWL 256
++ F R + F+ +C P ++ + G Q SP + E E
Sbjct: 822 QNSSAFKFYR--KKVFELCPSICFTSSPHNLHTGGGDTTGSQ-ESPVDLMEGEAEFEDEP 878
Query: 257 PP 258
PP
Sbjct: 879 PP 880
>gi|8923582 zinc finger protein 446 [Homo sapiens]
Length = 450
Score = 33.5 bits (75), Expect = 0.32
Identities = 23/86 (26%), Positives = 29/86 (33%), Gaps = 12/86 (13%)
Query: 7 PGPSRWRRAASIVLAAGWSRPETATPPSRPPPAEGFRLLLLQRSPHQGFMPGAHVFSGGV 66
PGP+ W + A RP T P++P PAE P A
Sbjct: 286 PGPAAWEGLSGAATPAPTVRPGTPPVPTQPTPAE------------TRLEPAATPRKPYT 333
Query: 67 LDAADRSADWLGLFAPHHGPPRFGLG 92
+ R DW +F HH G G
Sbjct: 334 CEQCGRGFDWKSVFVIHHRTHTSGPG 359
>gi|77681565 NG5 protein [Homo sapiens]
Length = 306
Score = 32.7 bits (73), Expect = 0.55
Identities = 30/105 (28%), Positives = 39/105 (37%), Gaps = 17/105 (16%)
Query: 82 PHHGPPRFGLGPAPFSRTAFP--SLPDTDDHK-----TDNTGTLPE----DVAFRICAVR 130
PH PP + P A P + P + H T TLP +A +
Sbjct: 13 PHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQ 72
Query: 131 EAFEEAGVLLLRPRTSPPGPAPGPGLALEPPPGLASWRDRVRQDP 175
+ L P +PPGPA G PPPG A+ R+ DP
Sbjct: 73 RGPSSSATLPRPPHHAPPGPAAGA-----PPPGCAT-LPRMPPDP 111
>gi|144226847 obscurin-like 1 [Homo sapiens]
Length = 1896
Score = 32.3 bits (72), Expect = 0.71
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
Query: 94 APFSRTAFPSLPDTDDHKTDNTGTLPEDVAFRICAVR----EAFEEAGVLLLRPRTSPP- 148
A R +FP+ D +H T LP D +C R EA+ A V +L P S P
Sbjct: 53 AASERLSFPA--DGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPPASDPE 110
Query: 149 -----GPAPGPG 155
P P PG
Sbjct: 111 LQPAERPLPSPG 122
>gi|113428456 PREDICTED: similar to mCG141871 [Homo sapiens]
Length = 358
Score = 32.3 bits (72), Expect = 0.71
Identities = 42/141 (29%), Positives = 53/141 (37%), Gaps = 15/141 (10%)
Query: 26 RPETATPPSRPPPAEGFRLLLLQRSPHQGFMPGAHVFSGGVLDAADRSADWLGLFAPHHG 85
R E+ P A L +R +G G F GG+ SA +L P
Sbjct: 44 RGESGAEPIMGESAAATASLFQRRRRGRG---GRVTFPGGLKG----SARFLSFGPPFPA 96
Query: 86 PPR--FGLGPAPFSRTAFPSLP--DTDDHKTDNTGTLPEDVAFRI---CAVREAFEEAGV 138
PP F P P+ R SL DT+D G L R+ A+ G+
Sbjct: 97 PPAPPFPAAPGPWLRRPLFSLKLSDTEDVFPRRAGPLEVPADSRVFVQAALARPSPRWGL 156
Query: 139 LLLRPRTSPPG-PAPGPGLAL 158
L R +P PAPGP LAL
Sbjct: 157 ALHRCSVTPSSRPAPGPALAL 177
>gi|113428072 PREDICTED: similar to mCG141871 [Homo sapiens]
Length = 358
Score = 32.3 bits (72), Expect = 0.71
Identities = 42/141 (29%), Positives = 53/141 (37%), Gaps = 15/141 (10%)
Query: 26 RPETATPPSRPPPAEGFRLLLLQRSPHQGFMPGAHVFSGGVLDAADRSADWLGLFAPHHG 85
R E+ P A L +R +G G F GG+ SA +L P
Sbjct: 44 RGESGAEPIMGESAAATASLFQRRRRGRG---GRVTFPGGLKG----SARFLSFGPPFPA 96
Query: 86 PPR--FGLGPAPFSRTAFPSLP--DTDDHKTDNTGTLPEDVAFRI---CAVREAFEEAGV 138
PP F P P+ R SL DT+D G L R+ A+ G+
Sbjct: 97 PPAPPFPAAPGPWLRRPLFSLKLSDTEDVFPRRAGPLEVPADSRVFVQAALARPSPRWGL 156
Query: 139 LLLRPRTSPPG-PAPGPGLAL 158
L R +P PAPGP LAL
Sbjct: 157 ALHRCSVTPSSRPAPGPALAL 177
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 32.3 bits (72), Expect = 0.71
Identities = 27/103 (26%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 234 VVGYQWSSPSEATESFLSKEIWLPPPQFYE-VRRLANFASLSDLHKFCLGRALEGLERWL 292
V+ Y+ SS + +E F+ P++YE +R+ +F + + + R+L LE+
Sbjct: 1394 VINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEK-- 1451
Query: 293 PIILLTADGMVHLLPGDELYLEDSDFLENLMSTEKKTEEIMKE 335
++LL + L G ++Y EDS L+++ + + ++I KE
Sbjct: 1452 DVMLLCHNAQTFNLEGSQIY-EDSIVLQSVFKSAR--QKIAKE 1491
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 32.3 bits (72), Expect = 0.71
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 143 PRTSPPGPAPGPGLALE---PPPGLASWRDRVRQDP 175
P+ PPGP P P A E PPP S+ D+ Q P
Sbjct: 925 PQEPPPGPPPSPAAAPEAVPPPPAPPSYSDKGVQTP 960
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 32.3 bits (72), Expect = 0.71
Identities = 32/88 (36%), Positives = 33/88 (37%), Gaps = 20/88 (22%)
Query: 82 PHHGPPRFGLGPAPFSRTAFPSLPDTDDHKTDNTGTLPEDVAFRICAVREAFEEAGVLLL 141
P GPP G PAP R P P T G P G+ L
Sbjct: 406 PMPGPPPLGPPPAPPLR---PPGPPTGLPPGPPPGAPP------------FLRPPGMPGL 450
Query: 142 R---PRTSPPGPAPG--PGLALEPPPGL 164
R PR PPGP PG PG PPPGL
Sbjct: 451 RGPLPRLLPPGPPPGRPPGPPPGPPPGL 478
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 32.0 bits (71), Expect = 0.93
Identities = 43/166 (25%), Positives = 55/166 (33%), Gaps = 35/166 (21%)
Query: 27 PETATPPSRPPPAEGFRLLL---LQRSPHQGFMPGAHVFSGGVLDAADRSADWLGLFAPH 83
P + P PP + L+ + SP Q P SG A RS + P+
Sbjct: 1810 PSSEPPGGEDPPLDTDVLVPGAPERHSPIQNLDPPLRPDSGSAPPPAPRSFSGARIKVPN 1869
Query: 84 HGPPRFGLGPAPFSRTAFPSLPDTDDHKTDNTGT-----------LPEDVAFRICAVREA 132
+ P R LG F P P + H G P +A R R A
Sbjct: 1870 YSPSRRPLGGVSFGPLPSPGSPSSLTHHIPTVGDPDFPAPPRRSRRPSPLAPRPPPSRWA 1929
Query: 133 ---FEEAGVLLLRPRTS-------------PPGPAPGPGLALEPPP 162
+ + L + P TS PPGPAP P PPP
Sbjct: 1930 SPPLKTSPQLRVPPPTSVVTALTPTSGELAPPGPAPSP-----PPP 1970
>gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4
[Homo sapiens]
Length = 809
Score = 31.6 bits (70), Expect = 1.2
Identities = 38/121 (31%), Positives = 45/121 (37%), Gaps = 33/121 (27%)
Query: 46 LLQRSPHQGFMPGAHVFSGGVLDAADRSADWLGLFAPHHGPPRFGLGPAPFSRTAFPSLP 105
LL+R P G++PG +DR P PA A PSLP
Sbjct: 59 LLRRGPEMGYLPG-----------SDRD-------------PTLATPPAG-QTLAVPSLP 93
Query: 106 DTDDHKTDNTGTLPEDVAFRICAVREAFEEAGVLLLRP--RTSPPGPAP-GPGLALEPPP 162
+ GT P A VR A A LL P T+PP P+P PG L P
Sbjct: 94 -----RATEPGTGPLTTAVTPNGVRGAGPTAPELLTPPPGTTAPPPPSPASPGPPLGPEG 148
Query: 163 G 163
G
Sbjct: 149 G 149
>gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2
[Homo sapiens]
Length = 910
Score = 31.6 bits (70), Expect = 1.2
Identities = 38/121 (31%), Positives = 45/121 (37%), Gaps = 33/121 (27%)
Query: 46 LLQRSPHQGFMPGAHVFSGGVLDAADRSADWLGLFAPHHGPPRFGLGPAPFSRTAFPSLP 105
LL+R P G++PG +DR P PA A PSLP
Sbjct: 59 LLRRGPEMGYLPG-----------SDRD-------------PTLATPPAG-QTLAVPSLP 93
Query: 106 DTDDHKTDNTGTLPEDVAFRICAVREAFEEAGVLLLRP--RTSPPGPAP-GPGLALEPPP 162
+ GT P A VR A A LL P T+PP P+P PG L P
Sbjct: 94 -----RATEPGTGPLTTAVTPNGVRGAGPTAPELLTPPPGTTAPPPPSPASPGPPLGPEG 148
Query: 163 G 163
G
Sbjct: 149 G 149
>gi|239757128 PREDICTED: similar to mCG141871 [Homo sapiens]
Length = 306
Score = 31.6 bits (70), Expect = 1.2
Identities = 35/109 (32%), Positives = 43/109 (39%), Gaps = 12/109 (11%)
Query: 58 GAHVFSGGVLDAADRSADWLGLFAPHHGPPR--FGLGPAPFSRTAFPSLP--DTDDHKTD 113
G F GG+ SA +L P PP F P P+ R SL DT+D
Sbjct: 21 GRVTFPGGLKG----SARFLSFGPPFPAPPAPPFPAAPGPWLRRPLFSLKLSDTEDVFPR 76
Query: 114 NTGTLPEDVAFRI---CAVREAFEEAGVLLLRPRTSPPG-PAPGPGLAL 158
G L R+ A+ G+ L R +P PAPGP LAL
Sbjct: 77 RAGPLEVPADSRVFVQAALARPSPRWGLALHRCSVTPSSRPAPGPALAL 125
>gi|12597625 activating transcription factor 5 [Homo sapiens]
Length = 282
Score = 31.6 bits (70), Expect = 1.2
Identities = 29/95 (30%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Query: 82 PHHGPPRFGLGPAPFSRTAFPSLPDTDDHKTDNTGTLPEDVAFRICAVREAFEEAGVLLL 141
P PP P P + + SLP D + TL D+ C EE G+ L
Sbjct: 123 PPPSPPPLPPPPLPPAPSLPLSLPSFDLPQPPVLDTL--DLLAIYCRNEAGQEEVGMPPL 180
Query: 142 RPRTSPPGPAPGPGLALEPPPGLASWRDRVRQDPR 176
P PP P+P L P P A+ R +Q R
Sbjct: 181 PPPQQPPPPSPPQPSRLAPYPHPATTRGDRKQKKR 215
>gi|28558977 mediator complex subunit 26 [Homo sapiens]
Length = 600
Score = 31.6 bits (70), Expect = 1.2
Identities = 28/108 (25%), Positives = 38/108 (35%), Gaps = 20/108 (18%)
Query: 83 HHGPPRFGLGPAPFSRTAFPSLPDTDDHKTDNTGTLPEDVAFRICAVREAFEEAGVL--- 139
H GPP P + P +P++ T+ PE A + A E L
Sbjct: 158 HPGPP-----PKVSKASHDPLVPNSSPLPTNGISGSPESFASSLDGSGHAGPEGSRLERD 212
Query: 140 ------------LLRPRTSPPGPAPGPGLALEPPPGLASWRDRVRQDP 175
+RP TS PG PG L+P + DRV + P
Sbjct: 213 ENDKHSGKIPVNAVRPHTSSPGLGKPPGPCLQPKASVLQQLDRVDETP 260
>gi|21359951 RNA binding motif protein 42 [Homo sapiens]
Length = 480
Score = 31.6 bits (70), Expect = 1.2
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 138 VLLLRPRTSPPGPAPGPGL-ALEPPPGLASWRDRVRQDPRHFLR 180
+L LRPR PP P P PGL ALE P L D+ + P R
Sbjct: 317 LLSLRPRPRPPRPEPPPGLMALEVPEPLG--EDKKKGKPEKLKR 358
>gi|21735550 mitogen-activated protein kinase kinase kinase 10 [Homo
sapiens]
Length = 954
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/78 (28%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Query: 29 TATPPSRPPPAEGFRLLLLQRSPHQGFMPGAHVFSGGVLDAADRSADWLGLFAPHHGPPR 88
T TP P L ++ P Q P HV + + R G P
Sbjct: 784 TPTPSPSTNPLVDLELESFKKDPRQSLTP-THVTAACAVSRGHRRTPSDGALGQRGPPEP 842
Query: 89 FGLGPAPFSRTAFPSLPD 106
G GP P FP LPD
Sbjct: 843 AGHGPGPRDLLDFPRLPD 860
>gi|21362070 hypothetical protein LOC79034 [Homo sapiens]
Length = 449
Score = 31.6 bits (70), Expect = 1.2
Identities = 30/115 (26%), Positives = 43/115 (37%), Gaps = 27/115 (23%)
Query: 11 RWRRAASIVLAAG---WSRPETATPPSRPPPAEGFRLLL---LQRSPHQGFMPGAHVFSG 64
R +A + +A+G +R + T SR P +L++ +Q+SPH PG
Sbjct: 351 RLAQALQVAMASGALLCTRDDLRTLCSRLPHNNLLQLVISGPVQQSPHAALPPG------ 404
Query: 65 GVLDAADRSADWLGLFAPHHGPPRFGLGPAPFSRTAFPSLPDTDDHKTDNTGTLP 119
F PH P G G P A P+LP H + T P
Sbjct: 405 ---------------FYPHIHTPPLGYGAVPAHPAAHPALPTHPGHTFISGVTFP 444
>gi|239749959 PREDICTED: hypothetical protein [Homo sapiens]
Length = 959
Score = 31.2 bits (69), Expect = 1.6
Identities = 38/136 (27%), Positives = 49/136 (36%), Gaps = 23/136 (16%)
Query: 28 ETATPPSRPPPAEGFRLLLLQRSPHQG-------FMPGAHVFSGGVLDAADRSADWL--G 78
E PP+ PA+ L PHQ G S G++ + L G
Sbjct: 432 EAWLPPAPSGPAQQAASPFLPHWPHQEPQRSLDQAAQGYKALSAGLVPSHKARTPQLDKG 491
Query: 79 LFAPHHGPPRFGLGPAPFSRTAFPSLPDTDDHKTDNTGTLPEDVAFRICAVREAFEEAGV 138
L P PP G P F T + DH+ +TGT PE R+
Sbjct: 492 LLLPSAQPPS-GQVPREFKGTGPYATNPLADHRK-STGTGPEPGPTRLQC---------- 539
Query: 139 LLLRPRTSPPGPAPGP 154
L PR++ GP PGP
Sbjct: 540 --LLPRSTGTGPEPGP 553
>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
Length = 571
Score = 31.2 bits (69), Expect = 1.6
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 135 EAGVLLLRPRTSPP--GPAPGPGLALE------PPPGLASWRDRVRQDP 175
++GV+ RPR SPP GP PGP AL PP +A R + P
Sbjct: 53 DSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPP 101
>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 31.2 bits (69), Expect = 1.6
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 135 EAGVLLLRPRTSPP--GPAPGPGLALE------PPPGLASWRDRVRQDP 175
++GV+ RPR SPP GP PGP AL PP +A R + P
Sbjct: 53 DSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPP 101
>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 31.2 bits (69), Expect = 1.6
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 135 EAGVLLLRPRTSPP--GPAPGPGLALE------PPPGLASWRDRVRQDP 175
++GV+ RPR SPP GP PGP AL PP +A R + P
Sbjct: 53 DSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPP 101
>gi|4885243 FOS-like antigen 1 [Homo sapiens]
Length = 271
Score = 30.8 bits (68), Expect = 2.1
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 140 LLRPRTSPPGPAPGPGLALEPPPGL 164
L P+ SPP P PG AL PPPG+
Sbjct: 68 LTYPQYSPPQPRPGVIRALGPPPGV 92
>gi|116734689 socius isoform 3 [Homo sapiens]
Length = 400
Score = 30.8 bits (68), Expect = 2.1
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 7/32 (21%)
Query: 139 LLLRPRTSP-------PGPAPGPGLALEPPPG 163
LLLR R +P PGP PGPG P PG
Sbjct: 347 LLLRARRAPKSSLKFSPGPCPGPGPGPSPGPG 378
>gi|116734681 socius isoform 1 [Homo sapiens]
Length = 487
Score = 30.8 bits (68), Expect = 2.1
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 7/32 (21%)
Query: 139 LLLRPRTSP-------PGPAPGPGLALEPPPG 163
LLLR R +P PGP PGPG P PG
Sbjct: 434 LLLRARRAPKSSLKFSPGPCPGPGPGPSPGPG 465
>gi|116734679 socius isoform 2 [Homo sapiens]
Length = 520
Score = 30.8 bits (68), Expect = 2.1
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 7/32 (21%)
Query: 139 LLLRPRTSP-------PGPAPGPGLALEPPPG 163
LLLR R +P PGP PGPG P PG
Sbjct: 467 LLLRARRAPKSSLKFSPGPCPGPGPGPSPGPG 498
>gi|148276998 zinc finger protein 628 [Homo sapiens]
Length = 1055
Score = 30.8 bits (68), Expect = 2.1
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 100 AFPSLPDTDDHKTDNTGTLPEDVAFRICAVREAFEEAGVLLLRPRTSPPGPAPGPGLALE 159
+F + H+ +TG P FR + F + LLL RT PAPG A
Sbjct: 180 SFTQSTNLRQHQRVHTGERP----FRCPLCPKTFTHSSNLLLHQRTHGAAPAPGTASAAP 235
Query: 160 PP 161
PP
Sbjct: 236 PP 237
Score = 29.3 bits (64), Expect = 6.0
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 141 LRPRTSPPGPAPGPGLALEPPPGLASWRDRVRQDPR 176
++P T PP PAP P L L P + R RQ PR
Sbjct: 724 VQPPTPPPPPAP-PKLILLPSSSAGAGGGRARQGPR 758
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 30.4 bits (67), Expect = 2.7
Identities = 38/113 (33%), Positives = 47/113 (41%), Gaps = 14/113 (12%)
Query: 144 RTSPPGPAPGPGLALEPPPGLASWRDRVRQ-DPRHFLRLCAHLDC------TPDIWALHN 196
RT+PP P+PGP A PPG A D R+ P L A D TPD + N
Sbjct: 1001 RTAPPTPSPGPS-ASPGPPGPALTSDSSRELTPHSALTSEATSDAPDTSPPTPDPASRTN 1059
Query: 197 WSAWLT--PFLRGTTRRFDTAFFLCCLREPPPV-YPDLAEVVGYQWSSPSEAT 246
LT F T D++ EP P P L + + S+PSE T
Sbjct: 1060 PDLILTSPDFALSTP---DSSVVPALTPEPSPTPLPTLPKELTSDPSTPSEVT 1109
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,258,319
Number of Sequences: 37866
Number of extensions: 1164585
Number of successful extensions: 6475
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 6165
Number of HSP's gapped (non-prelim): 387
length of query: 375
length of database: 18,247,518
effective HSP length: 104
effective length of query: 271
effective length of database: 14,309,454
effective search space: 3877862034
effective search space used: 3877862034
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.