Guide to the Human Genome
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Name: CSK Sequence: fasta or formatted (450aa) NCBI GI: 4758078
Description:

c-src tyrosine kinase

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt mRNA [450aa] c-src tyrosine kinase
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         33           2
 C cysteine            2.2         10           1
 D aspartate           5.3         24           1
 E glutamate           7.6         34           2
 F phenylalanine       3.3         15           1
 G glycine             7.3         33           2
 H histidine           2.4         11           1
 I isoleucine          3.8         17           2
 K lysine              7.8         35           2
 L leucine            10.2         46           2
 M methionine          2.9         13           1
 N asparagine          3.3         15           2
 P proline             4.2         19           2
 Q glutamine           2.9         13           1
 R arginine            4.7         21           1
 S serine              5.3         24           2
 T threonine           4.9         22           1
 V valine              8.2         37           2
 W tryptophan          1.8          8           1
 Y tyrosine            4.4         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   c-src tyrosine kinase 
CSK                   1.000   c-src tyrosine kinase 
MATK                  0.512   megakaryocyte-associated tyrosine kinase isoform c [...
MATK                  0.512   megakaryocyte-associated tyrosine kinase isoform b [...
MATK                  0.512   megakaryocyte-associated tyrosine kinase isoform a [...
ABL2                  0.325   arg tyrosine kinase isoform c 
ABL2                  0.325   arg tyrosine kinase isoform b 
ABL2                  0.325   arg tyrosine kinase isoform e 
ABL2                  0.325   arg tyrosine kinase isoform d 
ABL2                  0.325   arg tyrosine kinase isoform a 
ABL1                  0.321   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.321   c-abl oncogene 1, receptor tyrosine kinase isoform b...
LCK                   0.304   lymphocyte-specific protein tyrosine kinase precurs...
LCK                   0.304   lymphocyte-specific protein tyrosine kinase precurs...
SRC                   0.301   proto-oncogene tyrosine-protein kinase SRC 
SRC                   0.301   proto-oncogene tyrosine-protein kinase SRC 
BLK                   0.299   B lymphoid tyrosine kinase 
YES1                  0.299   viral oncogene yes-1 homolog 1 
LYN                   0.297   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog ...
LYN                   0.297   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog is...
FYN                   0.292   protein-tyrosine kinase fyn isoform a 
FGR                   0.291   proto-oncogene tyrosine-protein kinase FGR 
FGR                   0.291   proto-oncogene tyrosine-protein kinase FGR 
FGR                   0.291   proto-oncogene tyrosine-protein kinase FGR 
HCK                   0.291   hemopoietic cell kinase isoform p61HCK 
TXK                   0.291   TXK tyrosine kinase 
FYN                   0.283   protein-tyrosine kinase fyn isoform b 
FRK                   0.280   fyn-related kinase 
TEC                   0.278   tec protein tyrosine kinase 
BTK                   0.275   Bruton agammaglobulinemia tyrosine kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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