Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 157415950
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157415950 hypothetical protein LOC199800 [Homo sapiens]
(153 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157415950 hypothetical protein LOC199800 [Homo sapiens] 324 2e-89
gi|239755298 PREDICTED: hypothetical protein [Homo sapiens] 34 0.056
gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo ... 34 0.056
gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo ... 34 0.056
gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo ... 33 0.073
gi|239744758 PREDICTED: hypothetical protein XP_002343261 [Homo ... 32 0.16
gi|18201913 forkhead box N1 [Homo sapiens] 32 0.16
gi|226498192 atonal homolog 8 [Homo sapiens] 32 0.28
gi|239751430 PREDICTED: hypothetical protein [Homo sapiens] 32 0.28
gi|239747649 PREDICTED: similar to Putative uncharacterized prot... 32 0.28
gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo ... 32 0.28
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 30 0.81
gi|239735603 POM121 membrane glycoprotein-like 12 [Homo sapiens] 30 1.1
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 30 1.1
gi|239747595 PREDICTED: hypothetical protein XP_002347777 [Homo ... 30 1.1
gi|239741460 PREDICTED: hypothetical protein XP_002342225 [Homo ... 30 1.1
gi|169202970 PREDICTED: hypothetical protein [Homo sapiens] 29 1.4
gi|169203510 PREDICTED: hypothetical protein [Homo sapiens] 29 1.4
gi|169202296 PREDICTED: hypothetical protein [Homo sapiens] 29 1.4
gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo sap... 29 1.8
gi|239752659 PREDICTED: hypothetical protein [Homo sapiens] 29 1.8
gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo sap... 29 1.8
gi|239750954 PREDICTED: hypothetical protein XP_002347616 [Homo ... 29 1.8
gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo sap... 29 1.8
gi|239745360 PREDICTED: hypothetical protein XP_002343446 [Homo ... 29 1.8
gi|155029539 alpha accessory factor 132 [Homo sapiens] 29 1.8
gi|153281158 dual specificity phosphatase 8 [Homo sapiens] 28 2.3
gi|33186895 selenoprotein V [Homo sapiens] 28 2.3
gi|45433499 zinc finger, DHHC-type containing 18 [Homo sapiens] 28 2.3
gi|31542493 D site of albumin promoter (albumin D-box) binding p... 28 3.1
>gi|157415950 hypothetical protein LOC199800 [Homo sapiens]
Length = 153
Score = 324 bits (831), Expect = 2e-89
Identities = 153/153 (100%), Positives = 153/153 (100%)
Query: 1 MTIHILILLLLLAFSAQGDLDTAARRGQHQVPQHRGHVCYLGVCRTHRLAEIIYWIRCLH 60
MTIHILILLLLLAFSAQGDLDTAARRGQHQVPQHRGHVCYLGVCRTHRLAEIIYWIRCLH
Sbjct: 1 MTIHILILLLLLAFSAQGDLDTAARRGQHQVPQHRGHVCYLGVCRTHRLAEIIYWIRCLH 60
Query: 61 QGALGEGQPRAPGPLQLWAPPVARGGSPARFPGFRPAARGLAQCPARWVTSGTARPLLGF 120
QGALGEGQPRAPGPLQLWAPPVARGGSPARFPGFRPAARGLAQCPARWVTSGTARPLLGF
Sbjct: 61 QGALGEGQPRAPGPLQLWAPPVARGGSPARFPGFRPAARGLAQCPARWVTSGTARPLLGF 120
Query: 121 SLPICMLELLLHISSPLTPAPETVFPSPSPGCD 153
SLPICMLELLLHISSPLTPAPETVFPSPSPGCD
Sbjct: 121 SLPICMLELLLHISSPLTPAPETVFPSPSPGCD 153
>gi|239755298 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 33.9 bits (76), Expect = 0.056
Identities = 23/49 (46%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 62 GALGEGQPRAPGPLQLWAPPV-------ARGGSPARFPGFRPAARGLAQ 103
G Q RAP PL+ A P AR GS AR PG PA R LAQ
Sbjct: 148 GLYPAAQRRAPAPLRPCAIPAPRRPAAAARLGSAARSPGAPPAGRSLAQ 196
>gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo
sapiens]
Length = 250
Score = 33.9 bits (76), Expect = 0.056
Identities = 23/49 (46%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 62 GALGEGQPRAPGPLQLWAPPV-------ARGGSPARFPGFRPAARGLAQ 103
G Q RAP PL+ A P AR GS AR PG PA R LAQ
Sbjct: 101 GLYPAAQRRAPAPLRPCAIPAPRRPAAAARLGSAARSPGAPPAGRSLAQ 149
>gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo
sapiens]
Length = 250
Score = 33.9 bits (76), Expect = 0.056
Identities = 23/49 (46%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 62 GALGEGQPRAPGPLQLWAPPV-------ARGGSPARFPGFRPAARGLAQ 103
G Q RAP PL+ A P AR GS AR PG PA R LAQ
Sbjct: 101 GLYPAAQRRAPAPLRPCAIPAPRRPAAAARLGSAARSPGAPPAGRSLAQ 149
>gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo
sapiens]
Length = 381
Score = 33.5 bits (75), Expect = 0.073
Identities = 26/90 (28%), Positives = 33/90 (36%), Gaps = 14/90 (15%)
Query: 25 RRGQH-----QVPQHRGHVCYLGVCRTHRLAEIIYWIRCLHQGALGEGQPRAPGPLQLWA 79
RR +H + P H G +C H W+ C H GA G G P + P A
Sbjct: 283 RRARHPGQGGRAPAHAGGLCNAAPSGCHPAPS---WVACAHTGAWGTGLPASHVPCAPGA 339
Query: 80 PPVARGGS------PARFPGFRPAARGLAQ 103
P GS P P A G++Q
Sbjct: 340 LPQGAFGSQGARAVPVLQPSQAAPAEGISQ 369
>gi|239744758 PREDICTED: hypothetical protein XP_002343261 [Homo
sapiens]
Length = 324
Score = 32.3 bits (72), Expect = 0.16
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 67 GQPRAP--GPLQLWAP---PVARGGSPARFPGFRPAARGLAQCPA 106
G+P +P PLQ W P P+ GSP + G R A GL+Q PA
Sbjct: 221 GRPGSPTAAPLQGWHPCGVPLIPSGSPPQGRGVRGRAWGLSQLPA 265
>gi|18201913 forkhead box N1 [Homo sapiens]
Length = 648
Score = 32.3 bits (72), Expect = 0.16
Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 6/91 (6%)
Query: 64 LGEGQPRAPGPLQLWAPPVARGGSPARF----PGFRPAARGLAQCPARWVTSGTARPLLG 119
+G+ + + PL PP G P R G P L P + LL
Sbjct: 385 IGDKREKLGSPLLGCPPPGLSGSGPIRPLAPPAGLSPPLHSLHPAPGPIPGKNPLQDLLM 444
Query: 120 FSLPICMLELLLHISSPLTP--APETVFPSP 148
P C + LH+S L P P+ +FP P
Sbjct: 445 GHTPSCYGQTYLHLSPGLAPPGPPQPLFPQP 475
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 31.6 bits (70), Expect = 0.28
Identities = 33/107 (30%), Positives = 38/107 (35%), Gaps = 21/107 (19%)
Query: 13 AFSAQGDLDTAARRGQHQVPQHRGHVCYLGVCRTHRLAEIIYWIRCLHQGALGEGQPRAP 72
A +G DTA RG + P+ V + RC GA+G G P P
Sbjct: 83 AVPPRGGTDTAGERGGSRAPE---------VSDARK--------RCFALGAVGPGLPTPP 125
Query: 73 GPLQLWAPPVARGG---SPARFPGFRPAARGLAQCPARWVTSGTARP 116
P A GG P R PG RP L PAR S P
Sbjct: 126 PPPPPAPQSQAPGGPEAQPFREPGLRPRIL-LCAPPARPAPSAPPAP 171
>gi|239751430 PREDICTED: hypothetical protein [Homo sapiens]
Length = 303
Score = 31.6 bits (70), Expect = 0.28
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 61 QGALGEGQPRAPGPLQLWAPPVARGGSPARFPGFRPAARGLAQCPARWVTSGTA 114
+G G+ AP P WAPP P R P RG A RWV + A
Sbjct: 97 RGGPGQVAAAAPAPPASWAPP-----QPGRRPTCPGCCRGAASGAPRWVRTWAA 145
>gi|239747649 PREDICTED: similar to Putative uncharacterized protein
FLJ44672 [Homo sapiens]
Length = 237
Score = 31.6 bits (70), Expect = 0.28
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 81 PVARGGSPARFPGFRPAARGLAQCPARWVTSGTARPLLGF-------SLPICMLELLLHI 133
P G PG PA R Q P + G++RP LG S P LE+ L
Sbjct: 80 PRPSSGLTVASPGSAPALRWHLQAPNGLRSVGSSRPSLGLLAASAGPSRPQVGLEVGLEE 139
Query: 134 SSPLTPAPETVFPSPSPG 151
P P +V + SPG
Sbjct: 140 QQVGLPGPSSVLSAASPG 157
>gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo
sapiens]
Length = 303
Score = 31.6 bits (70), Expect = 0.28
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 61 QGALGEGQPRAPGPLQLWAPPVARGGSPARFPGFRPAARGLAQCPARWVTSGTA 114
+G G+ AP P WAPP P R P RG A RWV + A
Sbjct: 97 RGGPGQVAAAAPAPPASWAPP-----QPGRRPTCPGCCRGAASGAPRWVRTWAA 145
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 30.0 bits (66), Expect = 0.81
Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 13/73 (17%)
Query: 81 PVARGGSPARFPGFRPAARGLAQC--PARWVTSGTARPLLGFSLPICMLELLLHISSPLT 138
P +R P P +P + L Q V SGT+RP P L L P
Sbjct: 1062 PASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSRP------PTPTLSL-----KPTP 1110
Query: 139 PAPETVFPSPSPG 151
PAP + P+P PG
Sbjct: 1111 PAPVRLSPAPPPG 1123
>gi|239735603 POM121 membrane glycoprotein-like 12 [Homo sapiens]
Length = 296
Score = 29.6 bits (65), Expect = 1.1
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 56 IRCLHQGALGEGQPRAPGPLQLWAP------PVARGGSPARFPG--FRPAARGLAQ 103
+ C +G + G RA P + W+P P R SP R PG RPA R AQ
Sbjct: 112 LSCAWEGCMKGGLCRAWNPGRTWSPVTIGIAPPERQESPWRSPGQRARPAGRPAAQ 167
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 29.6 bits (65), Expect = 1.1
Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Query: 70 RAPGPLQLWAPPVARGGSPARFPGFRPAARGLAQCPARWVTSGTARPLLGFSLP--ICML 127
R PGP + AP A A P R LA+C R V S RP +G SLP C
Sbjct: 112 REPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGS-CVRPSVGPSLPRRHCRR 170
Query: 128 ELLLHISSPLTPAPETVFP 146
H P P + P
Sbjct: 171 HCRCHCRRRPLPKPPPLQP 189
>gi|239747595 PREDICTED: hypothetical protein XP_002347777 [Homo
sapiens]
Length = 98
Score = 29.6 bits (65), Expect = 1.1
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 55 WIRCLHQGALGEGQPRAPGPLQLWAPPVARGGSPARFPGFRPAA 98
W +C G LG + ++ GP + PP +GG P+R RP+A
Sbjct: 57 WGKC-GPGPLGPPRQQSAGPWEGRCPPAVKGGGPSR---VRPSA 96
>gi|239741460 PREDICTED: hypothetical protein XP_002342225 [Homo
sapiens]
Length = 98
Score = 29.6 bits (65), Expect = 1.1
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 55 WIRCLHQGALGEGQPRAPGPLQLWAPPVARGGSPARFPGFRPAA 98
W +C G LG + ++ GP + PP +GG P+R RP+A
Sbjct: 57 WGKC-GPGPLGPPRQQSAGPWEGRCPPAVKGGGPSR---VRPSA 96
>gi|169202970 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 29.3 bits (64), Expect = 1.4
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 65 GEGQPRAPGPLQLWAPPVARGGSPARFPGFRPAAR-GLAQC 104
G G PRA G APP G FP RP AR G A+C
Sbjct: 50 GLGPPRAGGSPPPTAPPTPTGS----FPACRPGARFGAARC 86
>gi|169203510 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 29.3 bits (64), Expect = 1.4
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 65 GEGQPRAPGPLQLWAPPVARGGSPARFPGFRPAAR-GLAQC 104
G G PRA G APP G FP RP AR G A+C
Sbjct: 50 GLGPPRAGGSPPPTAPPTPTGS----FPACRPGARFGAARC 86
>gi|169202296 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 29.3 bits (64), Expect = 1.4
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 65 GEGQPRAPGPLQLWAPPVARGGSPARFPGFRPAAR-GLAQC 104
G G PRA G APP G FP RP AR G A+C
Sbjct: 50 GLGPPRAGGSPPPTAPPTPTGS----FPACRPGARFGAARC 86
>gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 28.9 bits (63), Expect = 1.8
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 69 PRAPGPLQLWAPPVARGGSPARFPGFRPAARGLAQCPARWVTSGTAR--PLLGFSLPIC- 125
P PGP + APP P R RP +R L+ WV + L+ L +
Sbjct: 162 PPPPGPRKARAPPPP---PPLRLG--RPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSG 216
Query: 126 --MLELLLHISSPLTPAPETVFPSPSPG 151
+ L+ H +S P P+ V +P+PG
Sbjct: 217 VYIFFLIPHATSSGPPRPQLVALAPAPG 244
>gi|239752659 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 28.9 bits (63), Expect = 1.8
Identities = 27/93 (29%), Positives = 35/93 (37%), Gaps = 23/93 (24%)
Query: 61 QGALGEGQPRAP-GPL---QLWAPPVARGGSPARFPGFRPAARGLAQCPARWVTSGTARP 116
QG +G PR GPL QL V+ GGSP + R P WV
Sbjct: 2 QGCEAQGVPRIHLGPLGDQQLDGKQVSSGGSPVQ-------RRAAMPVPDAWVC------ 48
Query: 117 LLGFSLPICMLELLLHISSPLTPAPETVFPSPS 149
P+ L +H+SS L P + P+
Sbjct: 49 ------PVAQQHLNVHLSSTLAPCRSSCVTRPA 75
>gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 28.9 bits (63), Expect = 1.8
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 69 PRAPGPLQLWAPPVARGGSPARFPGFRPAARGLAQCPARWVTSGTAR--PLLGFSLPIC- 125
P PGP + APP P R RP +R L+ WV + L+ L +
Sbjct: 162 PPPPGPRKARAPPPP---PPLRLG--RPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSG 216
Query: 126 --MLELLLHISSPLTPAPETVFPSPSPG 151
+ L+ H +S P P+ V +P+PG
Sbjct: 217 VYIFFLIPHATSSGPPRPQLVALAPAPG 244
>gi|239750954 PREDICTED: hypothetical protein XP_002347616 [Homo
sapiens]
Length = 194
Score = 28.9 bits (63), Expect = 1.8
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 61 QGALGEGQPR-APGPLQLWAPPVARGGSPARFPG 93
QGA G G R AP PL+ APP+ R R+ G
Sbjct: 131 QGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGG 164
>gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 28.9 bits (63), Expect = 1.8
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 69 PRAPGPLQLWAPPVARGGSPARFPGFRPAARGLAQCPARWVTSGTAR--PLLGFSLPIC- 125
P PGP + APP P R RP +R L+ WV + L+ L +
Sbjct: 162 PPPPGPRKARAPPPP---PPLRLG--RPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSG 216
Query: 126 --MLELLLHISSPLTPAPETVFPSPSPG 151
+ L+ H +S P P+ V +P+PG
Sbjct: 217 VYIFFLIPHATSSGPPRPQLVALAPAPG 244
>gi|239745360 PREDICTED: hypothetical protein XP_002343446 [Homo
sapiens]
Length = 194
Score = 28.9 bits (63), Expect = 1.8
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 61 QGALGEGQPR-APGPLQLWAPPVARGGSPARFPG 93
QGA G G R AP PL+ APP+ R R+ G
Sbjct: 131 QGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGG 164
>gi|155029539 alpha accessory factor 132 [Homo sapiens]
Length = 1217
Score = 28.9 bits (63), Expect = 1.8
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 108 WVTSGTARPLLGFSLPICMLELLLHISSPLTPAPETVFPSPS 149
W+TS ++R LL P C+ EL L + PL A P PS
Sbjct: 299 WMTSQSSRLLL--LKPECVQELELELEGPLLEADPKPLPMPS 338
>gi|153281158 dual specificity phosphatase 8 [Homo sapiens]
Length = 625
Score = 28.5 bits (62), Expect = 2.3
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 62 GALGEGQPRAPGPLQLWAPPVARGGSPA 89
G G GQP PG WAPP+ G+P+
Sbjct: 495 GLPGPGQPAGPGA---WAPPLDSPGTPS 519
>gi|33186895 selenoprotein V [Homo sapiens]
Length = 346
Score = 28.5 bits (62), Expect = 2.3
Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 72 PGPLQLWAPPVARGGSPARFPGFRPAARGLAQCPARWVTSGTARPLLGFSLPICMLELLL 131
P P W P P R P P P R A+ L G + +L+ L
Sbjct: 86 PPPAPAWIPTPVPTPVPVRNPTPVPTPARTLTPPVRVPAPAPAQLLAGIRAALPVLDSYL 145
Query: 132 HISSPLTPAPETVFPSP 148
+ PL P PE P+P
Sbjct: 146 APALPLDPPPE---PAP 159
>gi|45433499 zinc finger, DHHC-type containing 18 [Homo sapiens]
Length = 388
Score = 28.5 bits (62), Expect = 2.3
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 66 EGQPRAPGPLQLWAPPVARGGSPARFPGFRPA-ARGLAQCPARWVTSGT 113
E Q +PG L A P AR PA P P A A P RW +SG+
Sbjct: 5 EYQQISPGAAPLPASPGARRPGPAASPTPGPGPAPPAAPAPPRWSSSGS 53
>gi|31542493 D site of albumin promoter (albumin D-box) binding
protein [Homo sapiens]
Length = 325
Score = 28.1 bits (61), Expect = 3.1
Identities = 27/78 (34%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
Query: 73 GPLQLWAPPVARGGSPARFPGFRPAARGLAQCPARWVTSGTARPLLGFSLPICMLELLLH 132
GP A V GGSP PG PA LA P W + + L +LE H
Sbjct: 72 GPADAPAGAVVGGGSPRGRPGPVPAPGLLA--PLLWERTLPFGDVEYVDLDAFLLE---H 126
Query: 133 ISSPLTPAPETVFPSPSP 150
P P P P PSP
Sbjct: 127 GLPPSPPPPGGPSPEPSP 144
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.142 0.481
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,050,103
Number of Sequences: 37866
Number of extensions: 465489
Number of successful extensions: 2359
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 2285
Number of HSP's gapped (non-prelim): 163
length of query: 153
length of database: 18,247,518
effective HSP length: 93
effective length of query: 60
effective length of database: 14,725,980
effective search space: 883558800
effective search space used: 883558800
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.