Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: C17orf68 Sequence: fasta or formatted (1217aa) NCBI GI: 155029539
Description:

alpha accessory factor 132

Referenced in:

Replication Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         81           3
 C cysteine            3.5         43           2
 D aspartate           3.0         37           2
 E glutamate           5.4         66           2
 F phenylalanine       3.3         40           2
 G glycine             5.9         72           3
 H histidine           2.7         33           2
 I isoleucine          2.6         32           2
 K lysine              3.0         37           2
 L leucine            15.6        190           4
 M methionine          0.9         11           1
 N asparagine          2.0         24           1
 P proline             8.5        104           2
 Q glutamine           5.8         71           2
 R arginine            6.1         74           2
 S serine              9.8        119           3
 T threonine           4.3         52           2
 V valine              6.7         82           2
 W tryptophan          2.0         24           1
 Y tyrosine            2.1         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alpha accessory factor 132 
STYK1                 0.003   serine/threonine/tyrosine kinase 1 
KIAA1539              0.003   hypothetical protein LOC80256 
PTPN12                0.003   protein tyrosine phosphatase, non-receptor type 12 ...
PTPN12                0.003   protein tyrosine phosphatase, non-receptor type 12 ...
PTPN12                0.003   protein tyrosine phosphatase, non-receptor type 12 ...
ZNF644                0.003   zinc finger protein 644 isoform 1 
TCTEX1D4              0.003   Tctex1 domain containing 4 
LOC284297             0.003   hypothetical protein LOC284297 
PICALM                0.003   phosphatidylinositol-binding clathrin assembly prote...
DOCK8                 0.002   dedicator of cytokinesis 8 
MUC4                  0.002   mucin 4 isoform a 
PCLO                  0.002   piccolo isoform 2 
PCLO                  0.002   piccolo isoform 1 
MPI                   0.002   mannose-6- phosphate isomerase 
C15orf55              0.002   nuclear protein in testis 
SREBF1                0.002   sterol regulatory element binding transcription fact...
SREBF1                0.002   sterol regulatory element binding transcription fact...
CEP290                0.002   centrosomal protein 290kDa 
ACRV1                 0.002   acrosomal vesicle protein 1 isoform c precursor [Homo...
ACRV1                 0.002   acrosomal vesicle protein 1 isoform a precursor [Homo...
ACRV1                 0.002   acrosomal vesicle protein 1 isoform f precursor [Homo...
ACRV1                 0.002   acrosomal vesicle protein 1 isoform d precursor [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press