Guide to the Human Genome
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Name: ZDHHC18 Sequence: fasta or formatted (388aa) NCBI GI: 45433499
Description:

zinc finger, DHHC-type containing 18

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         31           3
 C cysteine            4.6         18           2
 D aspartate           2.8         11           1
 E glutamate           2.8         11           1
 F phenylalanine       6.2         24           3
 G glycine             8.5         33           2
 H histidine           2.1          8           2
 I isoleucine          4.9         19           2
 K lysine              3.1         12           1
 L leucine             9.5         37           3
 M methionine          1.5          6           1
 N asparagine          2.8         11           1
 P proline             9.5         37           3
 Q glutamine           1.8          7           2
 R arginine            7.0         27           2
 S serine              9.5         37           3
 T threonine           6.2         24           3
 V valine              5.4         21           2
 W tryptophan          1.3          5           1
 Y tyrosine            2.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, DHHC-type containing 18 
ZDHHC14               0.575   zinc finger, DHHC-type containing 14 isoform 1 [Homo...
ZDHHC14               0.575   zinc finger, DHHC-type containing 14 isoform 2 [Homo...
ZDHHC9                0.470   zinc finger, DHHC domain containing 9 
ZDHHC9                0.470   zinc finger, DHHC domain containing 9 
ZDHHC8                0.211   zinc finger, DHHC domain containing 8 
ZDHHC5                0.201   zinc finger, DHHC domain containing 5 
ZDHHC19               0.120   zinc finger, DHHC domain containing 19 
ZDHHC20               0.092   zinc finger, DHHC-type containing 20 
ZDHHC2                0.085   zinc finger, DHHC-type containing 2 
ZDHHC15               0.083   zinc finger, DHHC-type containing 15 isoform 2 [Hom...
ZDHHC15               0.083   zinc finger, DHHC-type containing 15 isoform 1 [Homo...
ZDHHC4                0.078   zinc finger, DHHC-type containing 4 
ZDHHC4                0.078   zinc finger, DHHC-type containing 4 
ZDHHC4                0.078   zinc finger, DHHC-type containing 4 
ZDHHC4                0.078   zinc finger, DHHC-type containing 4 
ZDHHC3                0.076   zinc finger, DHHC-type containing 3 isoform 3 [Homo...
ZDHHC17               0.075   huntingtin interacting protein 14 
ZDHHC12               0.070   zinc finger, DHHC domain containing 12 
ZDHHC3                0.069   zinc finger, DHHC-type containing 3 isoform 1 [Homo...
ZDHHC21               0.069   zinc finger, DHHC-type containing 21 
ZDHHC7                0.066   zinc finger, DHHC-type containing 7 isoform 2 [Homo...
ZDHHC11B              0.065   PREDICTED: zinc finger, DHHC-type containing 11B [H...
ZDHHC3                0.065   zinc finger, DHHC-type containing 3 isoform 2 
ZDHHC16               0.064   Abl-philin 2 isoform 2 
ZDHHC16               0.062   Abl-philin 2 isoform 4 
ZDHHC11B              0.062   PREDICTED: zinc finger, DHHC-type containing 11B is...
ZDHHC11               0.061   zinc finger, DHHC-type containing 11 
ZDHHC16               0.061   Abl-philin 2 isoform 1 
ZDHHC16               0.061   Abl-philin 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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