LOC100288239 18134

Name: LOC100288239	Sequence: fasta or formatted (324aa)		NCBI GI: 239744758
Description: PREDICTED: hypothetical protein XP_002343261		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 33 2 C cysteine 0.6 2 1 D aspartate 3.7 12 3 E glutamate 3.1 10 1 F phenylalanine 2.8 9 1 G glycine 10.2 33 2 H histidine 3.4 11 1 I isoleucine 2.2 7 1 K lysine 4.9 16 2 L leucine 7.7 25 2 M methionine 4.6 15 3 N asparagine 1.5 5 1 P proline 10.5 34 3 Q glutamine 4.0 13 2 R arginine 8.0 26 3 S serine 7.4 24 2 T threonine 6.8 22 3 V valine 5.2 17 2 W tryptophan 1.9 6 1 Y tyrosine 1.2 4 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343261 LOC100293739 0.180 PREDICTED: hypothetical protein LOC100294421 0.180 PREDICTED: hypothetical protein SMARCA4 0.023 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.023 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.023 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.023 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.023 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.023 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.023 SWI/SNF-related matrix-associated actin-dependent re... FOXL2 0.022 forkhead box L2 ZNF828 0.022 zinc finger protein 828 NACA 0.019 nascent polypeptide-associated complex alpha subuni... ARID3A 0.017 AT rich interactive domain 3A (BRIGHT- like) protein ... COL3A1 0.017 collagen type III alpha 1 preproprotein ZNF703 0.016 zinc finger protein 703 JPH2 0.016 junctophilin 2 isoform 1 RING1 0.016 ring finger protein 1 DLGAP4 0.016 disks large-associated protein 4 isoform a MAST3 0.016 microtubule associated serine/threonine kinase 3 [H... RNF111 0.016 ring finger protein 111 COL2A1 0.014 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.014 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL1A2 0.014 alpha 2 type I collagen SYN2 0.014 synapsin II isoform IIa CEP110 0.014 centrosomal protein 110kDa GATAD1 0.014 GATA zinc finger domain containing 1 COL16A1 0.014 alpha 1 type XVI collagen precursor SMARCD2 0.014 SWI/SNF-related matrix-associated actin-dependent r... FAM22F 0.014 hypothetical protein LOC54754 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.