TIPIN 6159

Name: TIPIN	Sequence: fasta or formatted (301aa)		NCBI GI: 157388910
Description: TIMELESS interacting protein		Referenced in: Circadian Rhythms Small RNAs in RNA Processing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 16 1 C cysteine 0.7 2 1 D aspartate 7.6 23 1 E glutamate 13.0 39 3 F phenylalanine 3.7 11 1 G glycine 3.7 11 1 H histidine 3.0 9 1 I isoleucine 3.7 11 1 K lysine 5.3 16 2 L leucine 10.6 32 2 M methionine 2.0 6 1 N asparagine 7.0 21 2 P proline 6.6 20 3 Q glutamine 5.3 16 3 R arginine 6.3 19 2 S serine 5.3 16 1 T threonine 5.3 16 1 V valine 4.7 14 1 W tryptophan 0.3 1 1 Y tyrosine 0.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TIMELESS interacting protein GOLGA1 0.022 golgin 97 MYST3 0.021 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.021 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.021 MYST histone acetyltransferase (monocytic leukemia)... CGNL1 0.021 cingulin-like 1 NOC3L 0.021 nucleolar complex associated 3 homolog RASEF 0.019 RAS and EF-hand domain containing WDR87 0.019 NYD-SP11 protein SMARCAL1 0.017 SWI/SNF-related matrix-associated actin-dependent re... SMARCAL1 0.017 SWI/SNF-related matrix-associated actin-dependent r... MLL3 0.015 myeloid/lymphoid or mixed-lineage leukemia 3 SPEM1 0.015 spermatid maturation 1 PDS5B 0.015 PDS5, regulator of cohesion maintenance, homolog B [H... GOLGA5 0.015 Golgi autoantigen, golgin subfamily a, 5 CCDC89 0.015 coiled-coil domain containing 89 TP53BP2 0.014 tumor protein p53 binding protein, 2 isoform 1 [Hom... TP53BP2 0.014 tumor protein p53 binding protein, 2 isoform 2 ZYX 0.014 zyxin ZYX 0.014 zyxin ANKRD24 0.014 ankyrin repeat domain 24 CASKIN1 0.014 CASK interacting protein 1 TJP1 0.014 tight junction protein 1 isoform a BLM 0.012 Bloom syndrome protein UACA 0.012 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.012 uveal autoantigen with coiled-coil domains and ankyr... CROCC 0.012 ciliary rootlet coiled-coil EEA1 0.012 early endosome antigen 1, 162kD CCDC46 0.012 coiled-coil domain containing 46 isoform a LMOD2 0.012 leiomodin 2 (cardiac) Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.