RASEF 27411

Name: RASEF	Sequence: fasta or formatted (740aa)		NCBI GI: 40255119
Description: RAS and EF-hand domain containing		Referenced in: Rab
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 65 4 C cysteine 1.8 13 2 D aspartate 8.5 63 2 E glutamate 9.3 69 3 F phenylalanine 3.4 25 1 G glycine 5.5 41 2 H histidine 1.5 11 1 I isoleucine 4.5 33 2 K lysine 5.9 44 2 L leucine 8.9 66 3 M methionine 1.5 11 1 N asparagine 3.8 28 2 P proline 3.2 24 1 Q glutamine 4.9 36 1 R arginine 7.6 56 3 S serine 8.8 65 3 T threonine 4.5 33 1 V valine 5.0 37 1 W tryptophan 0.7 5 1 Y tyrosine 2.0 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RAS and EF-hand domain containing EFCAB4B 0.153 EF-hand calcium binding domain 4B isoform a RAB8A 0.093 mel transforming oncogene RAB8B 0.092 RAB8B, member RAS oncogene family RAB37 0.086 RAB37, member RAS oncogene family isoform 3 RAB37 0.085 RAB37, member RAS oncogene family isoform 2 RAB1B 0.085 RAB1B, member RAS oncogene family RAB1A 0.084 RAB1A, member RAS oncogene family isoform 1 RAB26 0.082 RAB26, member RAS oncogene family RAB10 0.081 ras-related GTP-binding protein RAB10 RAB13 0.080 RAB13, member RAS oncogene family RAB43 0.080 RAB43 protein LOC100131294 0.079 PREDICTED: similar to RAB13, member RAS oncogene fa... LOC100131294 0.079 PREDICTED: similar to hCG24991 LOC100131294 0.079 PREDICTED: similar to hCG24991 RAB30 0.078 RAB30, member RAS oncogene family RAB2A 0.074 RAB2A, member RAS oncogene family RAB11B 0.074 RAB11B, member RAS oncogene family RAB35 0.073 RAB35, member RAS oncogene family RAB12 0.073 RAB12, member RAS oncogene family RAB2B 0.073 RAB2B protein isoform 1 RAB11A 0.073 Ras-related protein Rab-11A RAB3A 0.072 RAB3A, member RAS oncogene family RAB27B 0.072 RAB27B, member RAS oncogene family RAB3D 0.072 RAB3D, member RAS oncogene family RAB3C 0.070 RAB3C, member RAS oncogene family RAB27A 0.070 Ras-related protein Rab-27A RAB27A 0.070 Ras-related protein Rab-27A RAB27A 0.070 Ras-related protein Rab-27A RAB27A 0.070 Ras-related protein Rab-27A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.