SMARCAL1 12642

Name: SMARCAL1	Sequence: fasta or formatted (954aa)		NCBI GI: 21071060
Description: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt mRNA [954aa] SWI/SNF-related matrix-associated actin-dependent regulator of ch...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 83 3 C cysteine 1.0 10 1 D aspartate 4.6 44 2 E glutamate 6.0 57 2 F phenylalanine 4.4 42 2 G glycine 4.9 47 2 H histidine 2.0 19 2 I isoleucine 4.5 43 2 K lysine 7.3 70 2 L leucine 10.3 98 3 M methionine 1.9 18 1 N asparagine 2.8 27 1 P proline 6.2 59 2 Q glutamine 6.0 57 3 R arginine 5.1 49 2 S serine 10.6 101 4 T threonine 5.1 49 2 V valine 5.2 50 3 W tryptophan 1.3 12 1 Y tyrosine 2.0 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SWI/SNF-related matrix-associated actin-dependent re... SMARCAL1 1.000 SWI/SNF-related matrix-associated actin-dependent r... ZRANB3 0.175 zinc finger, RAN-binding domain containing 3 BTAF1 0.061 BTAF1 RNA polymerase II, B-TFIID transcription facto... SMARCA5 0.057 SWI/SNF-related matrix-associated actin-dependent re... SMARCA1 0.056 SWI/SNF-related matrix-associated actin-dependent r... CHD1L 0.055 chromodomain helicase DNA binding protein 1-like [H... SMARCA1 0.055 SWI/SNF-related matrix-associated actin-dependent re... CHD2 0.052 chromodomain helicase DNA binding protein 2 isoform... CHD4 0.052 chromodomain helicase DNA binding protein 4 SMARCA4 0.051 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.051 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.051 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.051 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.051 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.051 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.051 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.051 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.051 SWI/SNF-related matrix-associated actin-dependent re... SMARCAD1 0.050 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.049 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.049 SWI/SNF-related, matrix-associated actin-dependent ... CHD7 0.048 chromodomain helicase DNA binding protein 7 CHD5 0.048 chromodomain helicase DNA binding protein 5 CHD6 0.047 chromodomain helicase DNA binding protein 6 CHD3 0.047 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.047 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.047 chromodomain helicase DNA binding protein 3 isoform... HELLS 0.046 helicase, lymphoid-specific CHD1 0.046 chromodomain helicase DNA binding protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.