Guide to the Human Genome
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Name: TLN2 Sequence: fasta or formatted (2542aa) NCBI GI: 156938343
Description:

talin 2

Referenced in:

Additional Brain Proteins
Cytoskeleton
Extracellular Matrix

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.2        362           5
 C cysteine            1.6         41           1
 D aspartate           5.5        139           4
 E glutamate           7.1        180           2
 F phenylalanine       2.0         50           2
 G glycine             5.5        140           3
 H histidine           1.5         38           1
 I isoleucine          4.6        116           2
 K lysine              6.6        167           3
 L leucine             9.0        230           3
 M methionine          2.5         63           2
 N asparagine          3.1         79           2
 P proline             3.3         84           2
 Q glutamine           6.9        175           3
 R arginine            3.9         98           2
 S serine              7.9        202           3
 T threonine           6.1        156           2
 V valine              7.2        182           3
 W tryptophan          0.3          8           1
 Y tyrosine            1.3         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   talin 2 
TLN1                  0.776   talin 1 
HIP1                  0.022   huntingtin interacting protein 1 
HIP1R                 0.017   huntingtin interacting protein-1-related 
LOC100294412          0.017   PREDICTED: similar to KIAA0655 protein 
MESDC1                0.016   mesoderm development candidate 1 
RDX                   0.009   radixin 
EPB41L5               0.008   erythrocyte membrane protein band 4.1 like 5 
MYO7A                 0.008   myosin VIIA isoform 1 
EPB41L4B              0.008   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L4B              0.008   erythrocyte membrane protein band 4.1 like 4B isofo...
MSN                   0.008   moesin 
FERMT2                0.008   fermitin family homolog 2 isoform 1 
EPB41L4A              0.008   erythrocyte protein band 4.1-like 4 
EPB41L1               0.008   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L1               0.008   erythrocyte membrane protein band 4.1-like 1 isoform...
MYO7A                 0.008   myosin VIIA isoform 2 
PTPN4                 0.008   protein tyrosine phosphatase, non-receptor type 4 [Ho...
FERMT2                0.008   fermitin family homolog 2 isoform 2 
EZR                   0.007   ezrin 
EZR                   0.007   ezrin 
NF2                   0.007   neurofibromin 2 isoform 2 
NF2                   0.007   neurofibromin 2 isoform 2 
NF2                   0.007   neurofibromin 2 isoform 2 
NF2                   0.007   neurofibromin 2 isoform 1 
FERMT1                0.007   kindlin-1 
EPB41                 0.007   erythrocyte membrane protein band 4.1 (elliptocytosi...
FERMT3                0.007   fermitin family homolog 3 short form 
FERMT3                0.007   fermitin family homolog 3 long form 
PTPN3                 0.007   protein tyrosine phosphatase, non-receptor type 3 i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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