HIP1 26748

Name: HIP1	Sequence: fasta or formatted (1037aa)		NCBI GI: 38045919
Description: huntingtin interacting protein 1		Referenced in: Additional Brain Proteins Cytoskeleton
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 91 2 C cysteine 1.8 19 2 D aspartate 5.3 55 2 E glutamate 10.4 108 3 F phenylalanine 2.6 27 2 G glycine 4.4 46 1 H histidine 2.2 23 2 I isoleucine 3.5 36 1 K lysine 6.2 64 2 L leucine 12.0 124 2 M methionine 2.4 25 1 N asparagine 3.5 36 2 P proline 2.8 29 2 Q glutamine 6.8 70 2 R arginine 5.7 59 2 S serine 9.1 94 2 T threonine 4.6 48 2 V valine 5.6 58 3 W tryptophan 0.8 8 1 Y tyrosine 1.6 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 huntingtin interacting protein 1 HIP1R 0.481 huntingtin interacting protein-1-related LOC100294412 0.410 PREDICTED: similar to KIAA0655 protein TLN2 0.053 talin 2 TLN1 0.051 talin 1 MYH11 0.026 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.026 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.026 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.026 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH14 0.025 myosin, heavy chain 14 isoform 1 MYH14 0.025 myosin, heavy chain 14 isoform 2 MYH14 0.025 myosin, heavy chain 14 isoform 3 CROCC 0.025 ciliary rootlet coiled-coil MYO18A 0.025 myosin 18A isoform b MYO18A 0.025 myosin 18A isoform a GOLGA3 0.025 Golgi autoantigen, golgin subfamily a, 3 MYH10 0.025 myosin, heavy polypeptide 10, non-muscle MYH9 0.025 myosin, heavy polypeptide 9, non-muscle MYH1 0.024 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH4 0.024 myosin, heavy polypeptide 4, skeletal muscle MYH7B 0.024 myosin, heavy polypeptide 7B, cardiac muscle, beta ... NUMA1 0.023 nuclear mitotic apparatus protein 1 MYH2 0.023 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.023 myosin, heavy chain 2, skeletal muscle, adult [Homo... CGNL1 0.023 cingulin-like 1 MYH13 0.023 myosin, heavy polypeptide 13, skeletal muscle [Homo... CGN 0.023 cingulin TPM1 0.022 tropomyosin 1 alpha chain isoform 7 GOLGA1 0.022 golgin 97 MYH7 0.022 myosin, heavy chain 7, cardiac muscle, beta Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.