MESDC1 3411

Name: MESDC1	Sequence: fasta or formatted (362aa)		NCBI GI: 13446229
Description: mesoderm development candidate 1		Referenced in: Cytoskeleton
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.1 51 3 C cysteine 3.9 14 1 D aspartate 3.9 14 1 E glutamate 5.2 19 1 F phenylalanine 2.5 9 1 G glycine 7.7 28 2 H histidine 1.7 6 1 I isoleucine 1.4 5 2 K lysine 3.3 12 1 L leucine 11.9 43 4 M methionine 1.9 7 1 N asparagine 1.7 6 1 P proline 5.0 18 2 Q glutamine 4.7 17 1 R arginine 7.2 26 1 S serine 11.0 40 2 T threonine 4.4 16 1 V valine 8.0 29 2 W tryptophan 0.0 0 0 Y tyrosine 0.6 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mesoderm development candidate 1 TLN1 0.112 talin 1 TLN2 0.111 talin 2 EMILIN2 0.022 elastin microfibril interfacer 2 APOLD1 0.013 apolipoprotein L domain containing 1 isoform 1 [Hom... APOLD1 0.013 apolipoprotein L domain containing 1 isoform 2 [Hom... LOC100292334 0.009 PREDICTED: similar to GOLGA8B protein, partial [Hom... RFWD2 0.009 ring finger and WD repeat domain 2 isoform a RFWD2 0.009 ring finger and WD repeat domain 2 isoform d24 [Homo... DMBT1 0.007 deleted in malignant brain tumors 1 isoform c precu... DMBT1 0.007 deleted in malignant brain tumors 1 isoform b precu... DMBT1 0.007 deleted in malignant brain tumors 1 isoform a precu... KRT84 0.007 keratin, hair, basic, 4 SCGB3A1 0.007 secretoglobin, family 3A, member 1 SYNM 0.007 desmuslin isoform A NNT 0.006 nicotinamide nucleotide transhydrogenase NNT 0.006 nicotinamide nucleotide transhydrogenase SLC16A3 0.006 solute carrier family 16, member 3 SLC16A3 0.006 solute carrier family 16, member 3 SLC16A3 0.006 solute carrier family 16, member 3 LOC100291777 0.006 PREDICTED: similar to DMBT1 isoform 1 LOC100291777 0.006 PREDICTED: similar to DMBT1 isoform 2 ALPK3 0.006 alpha-kinase 3 GGT7 0.006 gamma-glutamyltransferase 7 GOLGA8B 0.004 golgi autoantigen, golgin subfamily a, 8B GOLGA8A 0.004 golgi autoantigen, golgin subfamily a, 8A JUND 0.004 jun D proto-oncogene Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.