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Search of human proteins with 11056016
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11056016 GC-rich promoter binding protein 1-like 1 [Homo
sapiens]
(474 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11056016 GC-rich promoter binding protein 1-like 1 [Homo sapi... 984 0.0
gi|28875782 GC-rich promoter binding protein 1 isoform 1 [Homo s... 296 4e-80
gi|187829640 GC-rich promoter binding protein 1 isoform 3 [Homo ... 289 4e-78
gi|187829623 GC-rich promoter binding protein 1 isoform 2 [Homo ... 284 1e-76
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 45 1e-04
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 43 5e-04
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 42 0.002
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 41 0.002
gi|18079216 CASK interacting protein 1 [Homo sapiens] 39 0.008
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 39 0.010
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 38 0.018
gi|41281612 zinc finger protein 828 [Homo sapiens] 38 0.023
gi|57864582 hornerin [Homo sapiens] 37 0.039
gi|55750053 atrophin-1 [Homo sapiens] 37 0.039
gi|55750041 atrophin-1 [Homo sapiens] 37 0.039
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 37 0.039
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 37 0.051
gi|186928829 dermokine isoform 4 precursor [Homo sapiens] 36 0.067
gi|186928827 dermokine isoform 5 precursor [Homo sapiens] 36 0.067
gi|186928825 dermokine isoform 3 precursor [Homo sapiens] 36 0.067
gi|33504489 dermokine isoform 2 precursor [Homo sapiens] 36 0.067
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 36 0.067
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 36 0.067
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 36 0.067
gi|68508961 centromere protein C 1 [Homo sapiens] 36 0.087
gi|148613886 regulatory factor X domain containing 2 [Homo sapiens] 36 0.087
gi|119395750 keratin 1 [Homo sapiens] 35 0.11
gi|109689723 abl interactor 2 [Homo sapiens] 35 0.11
gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens] 35 0.11
gi|139394646 iroquois homeobox protein 5 [Homo sapiens] 35 0.11
>gi|11056016 GC-rich promoter binding protein 1-like 1 [Homo
sapiens]
Length = 474
Score = 984 bits (2544), Expect = 0.0
Identities = 474/474 (100%), Positives = 474/474 (100%)
Query: 1 MAQHDFVPAWLNFSTPQSAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLR 60
MAQHDFVPAWLNFSTPQSAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLR
Sbjct: 1 MAQHDFVPAWLNFSTPQSAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLR 60
Query: 61 TAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSGWHSSSRGHDGMSQRSGGGTGNHRHW 120
TAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSGWHSSSRGHDGMSQRSGGGTGNHRHW
Sbjct: 61 TAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSGWHSSSRGHDGMSQRSGGGTGNHRHW 120
Query: 121 NGSFHSRKGCAFQEKPPMEIREEKKEDKVEKLQFEEEDFPSLNPEAGKQHQPCRPIGTPS 180
NGSFHSRKGCAFQEKPPMEIREEKKEDKVEKLQFEEEDFPSLNPEAGKQHQPCRPIGTPS
Sbjct: 121 NGSFHSRKGCAFQEKPPMEIREEKKEDKVEKLQFEEEDFPSLNPEAGKQHQPCRPIGTPS 180
Query: 181 GVWENPPSAKQPSKMLVIKKVSKEDPAAAFSAAFTSPGSHHANGNKLSSVVPSVYKNLVP 240
GVWENPPSAKQPSKMLVIKKVSKEDPAAAFSAAFTSPGSHHANGNKLSSVVPSVYKNLVP
Sbjct: 181 GVWENPPSAKQPSKMLVIKKVSKEDPAAAFSAAFTSPGSHHANGNKLSSVVPSVYKNLVP 240
Query: 241 KPVPPPSKPNAWKANRMEHKSGSLSSSRESAFTSPISVTKPVVLASGAALSSPKESPSST 300
KPVPPPSKPNAWKANRMEHKSGSLSSSRESAFTSPISVTKPVVLASGAALSSPKESPSST
Sbjct: 241 KPVPPPSKPNAWKANRMEHKSGSLSSSRESAFTSPISVTKPVVLASGAALSSPKESPSST 300
Query: 301 TPPIEISSSRLTKLTRRTTDRKSEFLKTLKDDRNGDFSENRDCDKLEDLEDNSTPEPKEN 360
TPPIEISSSRLTKLTRRTTDRKSEFLKTLKDDRNGDFSENRDCDKLEDLEDNSTPEPKEN
Sbjct: 301 TPPIEISSSRLTKLTRRTTDRKSEFLKTLKDDRNGDFSENRDCDKLEDLEDNSTPEPKEN 360
Query: 361 GEEGCHQNGLALPVVEEGEVLSHSLEAEHRLLKAMGWQEYPENDENCLPLTEDELKEFHM 420
GEEGCHQNGLALPVVEEGEVLSHSLEAEHRLLKAMGWQEYPENDENCLPLTEDELKEFHM
Sbjct: 361 GEEGCHQNGLALPVVEEGEVLSHSLEAEHRLLKAMGWQEYPENDENCLPLTEDELKEFHM 420
Query: 421 KTEQLRRNGFGKNGFLQSRSSSLFSPWRSTCKAEFEDSDTETSSSETSDDDAWK 474
KTEQLRRNGFGKNGFLQSRSSSLFSPWRSTCKAEFEDSDTETSSSETSDDDAWK
Sbjct: 421 KTEQLRRNGFGKNGFLQSRSSSLFSPWRSTCKAEFEDSDTETSSSETSDDDAWK 474
>gi|28875782 GC-rich promoter binding protein 1 isoform 1 [Homo
sapiens]
Length = 473
Score = 296 bits (757), Expect = 4e-80
Identities = 203/502 (40%), Positives = 263/502 (52%), Gaps = 62/502 (12%)
Query: 1 MAQHDFVPAWLNFSTPQSAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLR 60
MAQHDF PAWLNF TP S+ + FEKH E+ E R+ V+RRRHNSSDGF
Sbjct: 1 MAQHDFAPAWLNFPTPPSSTKSSLNFEKHSENFAWTENRYDVNRRRHNSSDGF------- 53
Query: 61 TAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSGWHSSSR-GHDGMSQRSGGGTGNHRH 119
DS + G + N GW + R G + ++ R G G+ R
Sbjct: 54 --------------DSAIGRPNGGNFGRKEKN--GWRTHGRNGTENINHRGGYHGGSSRS 97
Query: 120 WNGSFHSRKGCAFQEKPPMEIREEKKEDKVEKLQFEEEDFPSLNPEAGKQHQPCRPIGTP 179
+ FH+ K E + +KEDK E+ QFE EDFPSLNPE + +P
Sbjct: 98 RSSIFHAGKSQGLHENNIPDNETGRKEDKRERKQFEAEDFPSLNPEY--EREPNHNKSLA 155
Query: 180 SGVWENPPSAKQPS-KMLVIKKVSKED-PAAAFSAAFTSPGSHHANGNKLSSVVPSVYKN 237
+GVWE PP+ K + +MLVIKK + +D + F P NG PSVYK
Sbjct: 156 AGVWEYPPNPKSRAPRMLVIKKGNTKDLQLSGFPVVGNLPSQPVKNGTG-----PSVYKG 210
Query: 238 LVPKPVPPPSKPNAWKANRMEHKSGSLSSSRESAF-TSPISVTKPVVLASGAALSSPKE- 295
LVPKP PP+KP WK+ E+K G+ S ES F + K + +S KE
Sbjct: 211 LVPKPAAPPTKPTQWKSQTKENKVGT-SFPHESTFGVGNFNAFKSTAKNFSPSTNSVKEC 269
Query: 296 SPSSTTPPIEISSS--RLTKLTRRTTDRKSEFLKTLKDDRNGDFSEN-------RDCDKL 346
+ S+++ P++ + RLTKLTR TD+KSEFLK LK DR + E+ +D D
Sbjct: 270 NRSNSSSPVDKLNQQPRLTKLTRMRTDKKSEFLKALKRDRVEEEHEDESRAGSEKDDDSF 329
Query: 347 EDLEDNSTPE-------------PKENGEEGC-HQNGLALPVVEEGEVLSHSLEAEHRLL 392
NST + P+ENG Q + + +VLS SLEAEHRLL
Sbjct: 330 NLHNSNSTHQERDINRNFDENEIPQENGNASVISQQIIRSSTFPQTDVLSSSLEAEHRLL 389
Query: 393 KAMGWQEYPENDENCLPLTEDELKEFHMKTEQLRRNGFGKNGFLQSR--SSSLFSPWR-S 449
K MGWQE ENDE C PLTEDE++EF + +EQL++NG KNG L++ F PW+ S
Sbjct: 390 KEMGWQEDSENDETCAPLTEDEMREFQVISEQLQKNGLRKNGILKNGLICDFKFGPWKNS 449
Query: 450 TCKAEFEDSDTETSSSETSDDD 471
T K E+ DTETSSS+TSDDD
Sbjct: 450 TFKPTTENDDTETSSSDTSDDD 471
>gi|187829640 GC-rich promoter binding protein 1 isoform 3 [Homo
sapiens]
Length = 480
Score = 289 bits (739), Expect = 4e-78
Identities = 203/509 (39%), Positives = 263/509 (51%), Gaps = 69/509 (13%)
Query: 1 MAQHDFVPAWLNFSTPQSAKS-------PTATFEKHGEHLPRGEGRFGVSRRRHNSSDGF 53
MAQHDF PAWLNF TP S+ + FEKH E+ E R+ V+RRRHNSSDGF
Sbjct: 1 MAQHDFAPAWLNFPTPPSSTKVLTSSLKSSLNFEKHSENFAWTENRYDVNRRRHNSSDGF 60
Query: 54 FNNGPLRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSGWHSSSR-GHDGMSQRSGG 112
DS + G + N GW + R G + ++ R G
Sbjct: 61 ---------------------DSAIGRPNGGNFGRKEKN--GWRTHGRNGTENINHRGGY 97
Query: 113 GTGNHRHWNGSFHSRKGCAFQEKPPMEIREEKKEDKVEKLQFEEEDFPSLNPEAGKQHQP 172
G+ R + FH+ K E + +KEDK E+ QFE EDFPSLNPE + +P
Sbjct: 98 HGGSSRSRSSIFHAGKSQGLHENNIPDNETGRKEDKRERKQFEAEDFPSLNPEY--EREP 155
Query: 173 CRPIGTPSGVWENPPSAKQPS-KMLVIKKVSKED-PAAAFSAAFTSPGSHHANGNKLSSV 230
+GVWE PP+ K + +MLVIKK + +D + F P NG
Sbjct: 156 NHNKSLAAGVWEYPPNPKSRAPRMLVIKKGNTKDLQLSGFPVVGNLPSQPVKNGTG---- 211
Query: 231 VPSVYKNLVPKPVPPPSKPNAWKANRMEHKSGSLSSSRESAF-TSPISVTKPVVLASGAA 289
PSVYK LVPKP PP+KP WK+ E+K G+ S ES F + K +
Sbjct: 212 -PSVYKGLVPKPAAPPTKPTQWKSQTKENKVGT-SFPHESTFGVGNFNAFKSTAKNFSPS 269
Query: 290 LSSPKE-SPSSTTPPIEISSS--RLTKLTRRTTDRKSEFLKTLKDDRNGDFSEN------ 340
+S KE + S+++ P++ + RLTKLTR TD+KSEFLK LK DR + E+
Sbjct: 270 TNSVKECNRSNSSSPVDKLNQQPRLTKLTRMRTDKKSEFLKALKRDRVEEEHEDESRAGS 329
Query: 341 -RDCDKLEDLEDNSTPE-------------PKENGEEGC-HQNGLALPVVEEGEVLSHSL 385
+D D NST + P+ENG Q + + +VLS SL
Sbjct: 330 EKDDDSFNLHNSNSTHQERDINRNFDENEIPQENGNASVISQQIIRSSTFPQTDVLSSSL 389
Query: 386 EAEHRLLKAMGWQEYPENDENCLPLTEDELKEFHMKTEQLRRNGFGKNGFLQSR--SSSL 443
EAEHRLLK MGWQE ENDE C PLTEDE++EF + +EQL++NG KNG L++
Sbjct: 390 EAEHRLLKEMGWQEDSENDETCAPLTEDEMREFQVISEQLQKNGLRKNGILKNGLICDFK 449
Query: 444 FSPWR-STCKAEFEDSDTETSSSETSDDD 471
F PW+ ST K E+ DTETSSS+TSDDD
Sbjct: 450 FGPWKNSTFKPTTENDDTETSSSDTSDDD 478
>gi|187829623 GC-rich promoter binding protein 1 isoform 2 [Homo
sapiens]
Length = 493
Score = 284 bits (726), Expect = 1e-76
Identities = 203/522 (38%), Positives = 263/522 (50%), Gaps = 82/522 (15%)
Query: 1 MAQHDFVPAWLNFSTPQSAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLR 60
MAQHDF PAWLNF TP S+ + FEKH E+ E R+ V+RRRHNSSDGF
Sbjct: 1 MAQHDFAPAWLNFPTPPSSTKSSLNFEKHSENFAWTENRYDVNRRRHNSSDGF------- 53
Query: 61 TAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSGWHSSSR-GHDGMSQRSGGGTGNHRH 119
DS + G + N GW + R G + ++ R G G+ R
Sbjct: 54 --------------DSAIGRPNGGNFGRKEKN--GWRTHGRNGTENINHRGGYHGGSSRS 97
Query: 120 WNGSFHSRKGCAFQEKPPMEIREEKKEDKVEKLQFEEEDFPSLNPEAGKQHQPCRPIGTP 179
+ FH+ K E + +KEDK E+ QFE EDFPSLNPE + +P
Sbjct: 98 RSSIFHAGKSQGLHENNIPDNETGRKEDKRERKQFEAEDFPSLNPEY--EREPNHNKSLA 155
Query: 180 SGVW--------------------ENPPSAKQPS-KMLVIKKVSKED-PAAAFSAAFTSP 217
+GVW E PP+ K + +MLVIKK + +D + F P
Sbjct: 156 AGVWGLHAQTHTYPTKKISQAPLLEYPPNPKSRAPRMLVIKKGNTKDLQLSGFPVVGNLP 215
Query: 218 GSHHANGNKLSSVVPSVYKNLVPKPVPPPSKPNAWKANRMEHKSGSLSSSRESAF-TSPI 276
NG PSVYK LVPKP PP+KP WK+ E+K G+ S ES F
Sbjct: 216 SQPVKNGTG-----PSVYKGLVPKPAAPPTKPTQWKSQTKENKVGT-SFPHESTFGVGNF 269
Query: 277 SVTKPVVLASGAALSSPKE-SPSSTTPPIEISSS--RLTKLTRRTTDRKSEFLKTLKDDR 333
+ K + +S KE + S+++ P++ + RLTKLTR TD+KSEFLK LK DR
Sbjct: 270 NAFKSTAKNFSPSTNSVKECNRSNSSSPVDKLNQQPRLTKLTRMRTDKKSEFLKALKRDR 329
Query: 334 NGDFSEN-------RDCDKLEDLEDNSTPE-------------PKENGEEGC-HQNGLAL 372
+ E+ +D D NST + P+ENG Q +
Sbjct: 330 VEEEHEDESRAGSEKDDDSFNLHNSNSTHQERDINRNFDENEIPQENGNASVISQQIIRS 389
Query: 373 PVVEEGEVLSHSLEAEHRLLKAMGWQEYPENDENCLPLTEDELKEFHMKTEQLRRNGFGK 432
+ +VLS SLEAEHRLLK MGWQE ENDE C PLTEDE++EF + +EQL++NG K
Sbjct: 390 STFPQTDVLSSSLEAEHRLLKEMGWQEDSENDETCAPLTEDEMREFQVISEQLQKNGLRK 449
Query: 433 NGFLQSR--SSSLFSPWR-STCKAEFEDSDTETSSSETSDDD 471
NG L++ F PW+ ST K E+ DTETSSS+TSDDD
Sbjct: 450 NGILKNGLICDFKFGPWKNSTFKPTTENDDTETSSSDTSDDD 491
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 45.1 bits (105), Expect = 1e-04
Identities = 69/325 (21%), Positives = 110/325 (33%), Gaps = 48/325 (14%)
Query: 69 PSLFRHDSVDSGVSKGAYAGIT--GNPSGWHSSSRGHDGMSQRSGGGTGNHRHWNGSFHS 126
PS + SG+ G + T G+ SG +SS + HD S + G + + +GS HS
Sbjct: 115 PSTSQSQKRSSGLQSGHSSQRTSAGSSSGTNSSGQRHDRESYNNSGSSSRKKGQHGSEHS 174
Query: 127 RKGCAFQEKPPMEIREEKKEDKVEKLQFEEEDFPSLNPEAGKQHQPCRPIGTPSGVWEN- 185
+ + KP + N K+HQ + P W++
Sbjct: 175 KSRSSSPGKPQAVSSLNSSHSRSHG-----------NDHHSKEHQRSKSPRDPDANWDSP 223
Query: 186 ---------------PPSAKQPSKMLVIKKVSKEDPAAAFSAAFTSPGSHH----ANGNK 226
PPS S ++ K + P + S H ++GN
Sbjct: 224 SRVPFSSGQHSTQSFPPSLMSKSNSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQSHGNS 283
Query: 227 LSSVVPSVYKNLVPKPVPPPSKPNAWKANRMEHKSGSLSSSRESAFTSPISVTKPVVLAS 286
++ + PS +L + PS+P A SG +S E S P+
Sbjct: 284 MTELKPSSKAHLTKLKI--PSQPLDASA------SGDVSCVDEILKEMTHSWPPPLTAIH 335
Query: 287 GAALSSPKESPSST--TPPIEISSSRLTKLTRRTTDRKSEFLKTLKDDRNGDFSEN---- 340
+ P + P T + + + T + LKDD SE+
Sbjct: 336 TPCKTEPSKFPFPTKESQQSNFGTGEQKRYNPSKTSNGHQSKSMLKDDLKLSSSEDSDGE 395
Query: 341 RDCDK-LEDLEDNSTPEPKENGEEG 364
+DCDK + S EP + EG
Sbjct: 396 QDCDKTMPRSTPGSNSEPSHHNSEG 420
Score = 30.0 bits (66), Expect = 4.8
Identities = 55/291 (18%), Positives = 106/291 (36%), Gaps = 16/291 (5%)
Query: 90 TGNPSGWHSSSRGHDGMSQRSGGGTGNHRHWNG--SFHSRKGCAFQEKPPMEIREEKKED 147
T P S++ G D + + G +G R + S + + +K P + + E+
Sbjct: 518 TSGPKETSSATPGRDSKTIQKGSESGRGRQKSPAQSDSTTQRRTVGKKQPKKAEKAAAEE 577
Query: 148 KVEKLQFEEE---DFPSLNPEAGKQHQPCRPIGTPSGVWENPPSAKQPSKMLVIKKVSKE 204
L+ E E D S P + +H+ + + S+ +P+ KK
Sbjct: 578 PRGGLKIESETPVDLASSMPSS--RHKAATKGSRKPNIKKESKSSPRPTAEK--KKYKST 633
Query: 205 DPAAAFSAAFTSPGSHHANGNKLSSVVPSVYKNLVPKPVPPPSKPNAWKANRMEHKSGSL 264
++ S + ++ ++ S+ PS P+ P KP++ + +
Sbjct: 634 SKSSQKSREIIETDTSSSDSDESESLPPSSQTPKYPESNRTPVKPSSVEEEDSFFRQRMF 693
Query: 265 SSSRESAFTSPISVTK---PVVLASGAALSS--PKESPSSTTPPIEISSSRLTKLTRRTT 319
S E SP+S P+++ L + P + T PP + K TR
Sbjct: 694 SPMEEKELLSPLSEPDDRYPLIVKIDLNLLTRIPGKPYKETEPPKGEKKNVPEKHTREAQ 753
Query: 320 DRKSEFL--KTLKDDRNGDFSENRDCDKLEDLEDNSTPEPKENGEEGCHQN 368
+ SE + K + +N D + + K + + NS + E Q+
Sbjct: 754 KQASEKVSNKGKRKHKNEDDNRASESKKPKTEDKNSAGHKPSSNRESSKQS 804
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 43.1 bits (100), Expect = 5e-04
Identities = 84/386 (21%), Positives = 141/386 (36%), Gaps = 67/386 (17%)
Query: 126 SRKGCAFQEKPPMEIREEKKEDKVEKLQFEEEDFPSLNP-----------EAGKQHQPCR 174
+RK + ++ E E+KK K + + PS P +A ++ QP
Sbjct: 261 TRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVE 320
Query: 175 PIGTPSGVWENPPSA--KQPSKMLVIKKVSKEDPA--AAFSAAFTSPG---------SHH 221
S ++ K P+K +V K +K PA AA S++ +S S
Sbjct: 321 SSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSKP 380
Query: 222 ANGNKLSSVVPSVY-KNLVPKPVPPPSKPNAWKANRMEHKSGSLSSSRESAFTSP----- 275
A K SS P+V K+ KP P +P + K+ S SS ES+ +
Sbjct: 381 AGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSEEEKTKK 440
Query: 276 -ISVTKPVVLASGAALSSPKESPSSTTPPIEISSSRLTKLTRRTTDRKSEFLKTLK---- 330
++ TKP A A K++P + S S ++ T + + K K
Sbjct: 441 MVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAGG 500
Query: 331 --------------DDRNGDFSENRDCDKLEDLEDNSTPEPKENGEEGCHQNGLALPVVE 376
+ N S++ ++ E L+ +P P + NG + +
Sbjct: 501 AAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSPRP-----QAPKANGTSALTAQ 555
Query: 377 EGEVLSHSLEAEHRLLKA------MGWQEYPENDENCLPLTEDELKEFHMKTEQLRRNGF 430
G+ +S E E KA G + + +E + K+ ++T N F
Sbjct: 556 NGKAAKNSEEEEEEKKKAAVVVSKSGSLKKRKQNEAAKEAETPQAKKIKLQTP----NTF 611
Query: 431 GKNGFLQSRSSSLFSPWRSTCKAEFE 456
K + R+S SP+R + E E
Sbjct: 612 PKRKKGEKRAS---SPFRRVREEEIE 634
Score = 32.0 bits (71), Expect = 1.3
Identities = 57/252 (22%), Positives = 87/252 (34%), Gaps = 41/252 (16%)
Query: 133 QEKPPMEIREEKKEDKVEKLQFEEEDFPSLNPEAGKQHQPCRPIGTPSGVW--------- 183
Q P+ + +KK + EE+ P A K P + +G P G
Sbjct: 69 QANGPVAKKAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASESSS 128
Query: 184 --------ENPPSAKQPSKMLV--IKKVSKEDPAAAFSAAFTSPGSHH-----ANGNKLS 228
+ KQP + V K +K P A S+ S S K++
Sbjct: 129 SEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPKIT 188
Query: 229 SVVPSVYKNLVPKPVPPPSKPNAWKANRMEHKSGSLSSSRESAFTSPISVTKPVVLASGA 288
V PKP K KA S S SSS +S + K V
Sbjct: 189 PVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKKTVPKKQV 248
Query: 289 ALSSPKESPSSTTPPIEISSSRLTKLTRRTTDRKSEFLKTLKDDRNGDFSENRDCDKLED 348
+P + ++TTP + SSS ++D + E K +K ++ G +S
Sbjct: 249 VAKAPVK--AATTPTRKSSSSE-----DSSSDEEEEQKKPMK-NKPGPYS---------S 291
Query: 349 LEDNSTPEPKEN 360
+ S P PK++
Sbjct: 292 VPPPSAPPPKKS 303
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 41.6 bits (96), Expect = 0.002
Identities = 44/141 (31%), Positives = 62/141 (43%), Gaps = 29/141 (20%)
Query: 166 AGKQHQPCRPIGTPSGVWENPPS-AKQPSKMLVIKKVSKEDPAAAFSAAFTSPGSHHANG 224
+G + + +G PSG PPS +K+PS AA A +PGS + +G
Sbjct: 445 SGGNNASSQALGPPSGPHNPPPSTSKEPSA------------AAPTGAGGVAPGSGNNSG 492
Query: 225 NKLSSVVPSVYKNLVPKPVPPPSKP-----NAWKANRMEHKSGSLSSSRESAFTSPISVT 279
PS+ LVP PV PPS P +A A + + S++ E P+S
Sbjct: 493 G------PSL---LVPLPVNPPSSPTPSFSDAKAAGALLNGPPQFSTAPEIKAPEPLSSL 543
Query: 280 KPVVLASGAALSSPKESPSST 300
K +A AA+SS E P T
Sbjct: 544 KS--MAERAAISSGIEDPVPT 562
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 41.2 bits (95), Expect = 0.002
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 26/157 (16%)
Query: 160 PSLNPEAGKQHQPCRPIGTP----SGVWE---NPPSAKQPSKMLVIKKVSKEDPAAAFSA 212
P P G Q PC+P G P GV + P A QP S P S
Sbjct: 439 PRTGPAQGGQVAPCQPTGVPPATVGGVVQPCLGPAGAGQPQ--------SVPPPQMGGSG 490
Query: 213 AFTS-PGSHHANGNKLSSVVPSVYKNLVPKPVPPPSKPNAWKAN-RMEHKSGSLSSSRES 270
++ PG HA VVP V VP VP PS P+ + M + L+ S++
Sbjct: 491 PLSAVPGGPHA-------VVPGVPN--VPAAVPAPSVPSVSTTSVTMPNVPAPLAQSQQL 541
Query: 271 AFTSPISVTKPVVLASGAALSSPKESPSSTTPPIEIS 307
+ +P+S + ++ G L+ S ++ P ++S
Sbjct: 542 SSHTPVSRSSSIIQHVGLPLAPGTHSAPTSLPQSDLS 578
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 39.3 bits (90), Expect = 0.008
Identities = 41/148 (27%), Positives = 55/148 (37%), Gaps = 19/148 (12%)
Query: 160 PSLNPEAGKQHQPCRPIGTPSGVWENPPSAKQPSKMLVIKKVSKEDPAAAFSAAFTSPGS 219
P L P G+ +P +P +P V P Q S KKV P SP
Sbjct: 1209 PPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPG--------SPEV 1260
Query: 220 HHANGNKLSSVVPSVYKNLVPKPVPPPSKPNAWKA-NRMEHKSGSLSSSRESAFTSPISV 278
A+G P V PKP PPP+ P KA + S S + A P ++
Sbjct: 1261 KRAHGTP-----PPVS----PKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAAL 1311
Query: 279 TKPVVLASGAALSSPKESPSSTTPPIEI 306
KP +SP + PS P + +
Sbjct: 1312 AKPPGTPPSLG-ASPAKPPSPGAPALHV 1338
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 38.9 bits (89), Expect = 0.010
Identities = 60/244 (24%), Positives = 83/244 (34%), Gaps = 37/244 (15%)
Query: 102 GHDGMSQRSGGGTGNHRH-WNGSFHSRKGCAFQEKPPMEIREEKKEDKVEKLQFEEED-- 158
G + SG G G H W R G P + +E+K +D+ E+ + EEE
Sbjct: 317 GQLSLGLESGQGQGQHEESWQDVPQRRVGSGQGGSPCWKKQEQKLDDEEEEKKEEEEKDK 376
Query: 159 ----------FPSLNPEAGKQHQ--PCRPIGTPSGVWENPPSAKQPSKMLVIKKVSKEDP 206
+ P A K+ P P+ P+ +PP P + P
Sbjct: 377 EGEEKEERAVAEEMMPAAEKEEAKLPPPPLTPPA---PSPPPPLPPPSTSPPPPLCPPPP 433
Query: 207 AAAFSAAFTSPGSHHANGNKLSSVVPSVYKNLVPKPVPPPSKPNAWKANRMEHKSGSLSS 266
SP A + S P V K PP P+ +A R ++G
Sbjct: 434 PPVSPPPLPSPPPPPAQEEQEESPPPVVPATCSRKRGRPPLTPSQ-RAEREAARAGPEG- 491
Query: 267 SRESAFTSPISVTKPVVLASGAALSSPKESPSSTT----------PPIEISSSRLTKLTR 316
TSP + T P G SP +P STT P + SSR+ K R
Sbjct: 492 ------TSPPTPT-PSTATGGPPEDSPTVAPKSTTFLKNIRQFIMPVVSARSSRVIKTPR 544
Query: 317 RTTD 320
R D
Sbjct: 545 RFMD 548
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 38.1 bits (87), Expect = 0.018
Identities = 54/241 (22%), Positives = 87/241 (36%), Gaps = 43/241 (17%)
Query: 141 REEKKEDKVEKLQFEEEDFPSLNPEAGKQHQPCRPIGTPSGVWENPPSAKQPSKMLVIKK 200
+E K K K+ E + P + E+ + E S+K S+ L +
Sbjct: 186 KESSKTSKPHKVTKEHRERPRKDSESKSSSKELER--------EQAKSSKDTSRKLGEGR 237
Query: 201 VSKEDPAAAFSAAFTSPGSHHANGNKLSSVVPSVYKNLVPKPVPPPSKPNAW-------- 252
+ KE+ A AAF P KL S P K P P PPP + ++
Sbjct: 238 LPKEEKAPPPKAAFKEP-KMALKETKLESTSP---KGGPPPPPPPPPRASSKRPATADSP 293
Query: 253 KANRMEHKSGSLSSSRESAFTSPISVTKPVVLASGAALSSPKESPSSTTPPIEISSSRLT 312
K + + K S SR + TSP +S S S P + SS+R
Sbjct: 294 KPSAKKQKKSSSKGSRSAPGTSP--------------RTSSSSSFSDKKPAKDKSSTRGE 339
Query: 313 KLTRRTTDRKSEFLKTLKDDRNGD---------FSENRDCDKLEDLEDNSTPEPKENGEE 363
K+ + R+++ +++ + D S + D +S EP +N +
Sbjct: 340 KVKAESEPREAKKALEVEESNSEDEASFKSESAQSSPSNSSSSSDSSSDSDFEPSQNHSQ 399
Query: 364 G 364
G
Sbjct: 400 G 400
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 37.7 bits (86), Expect = 0.023
Identities = 49/187 (26%), Positives = 72/187 (38%), Gaps = 27/187 (14%)
Query: 160 PSLNPEAGKQHQPCRPIGTPSGVWENPPSAKQPSKMLVIKKVSKEDPAAAFSAAFTSPG- 218
P+++P + K P G+P NP ++ P K K P SPG
Sbjct: 305 PAVSPGSWKPGPP----GSPRPWKSNPSASSGPWKPA--KPAPSVSPGPWKPIPSVSPGP 358
Query: 219 -----SHHANGNKLSSVVPSVYKNLVPKPVPPPSKPNAWKANRME-HKSGSLSSSRESAF 272
S + K SSV PS +K+ PP+ P +WK+ E K+ S
Sbjct: 359 WKPTPSVSSASWKSSSVSPSSWKS-------PPASPESWKSGPPELRKTAPTLSPEHWKA 411
Query: 273 TSPISVTKPVVLASGAALS----SPKESPSSTTPPIEISSSRLTKLTRRTTDRKSEFLKT 328
P+S P + G LS SP SP P +L+ R+T+ +F ++
Sbjct: 412 VPPVS---PELRKPGPPLSPEIRSPAGSPELRKPSGSPDLWKLSPDQRKTSPASLDFPES 468
Query: 329 LKDDRNG 335
K R G
Sbjct: 469 QKSSRGG 475
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 37.0 bits (84), Expect = 0.039
Identities = 36/119 (30%), Positives = 48/119 (40%), Gaps = 19/119 (15%)
Query: 18 SAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSV 77
S ++TF++ G + S H S ++G R S PS RH S
Sbjct: 1315 STSGQSSTFDQEGSSTGQS------SSYGHRGSGSSQSSGYGRHGAGSGQSPSRGRHGS- 1367
Query: 78 DSGVSKGAYAGITGNPSGWHSSSRGH-DGMSQRSGGG---------TGNHRHWNGSFHS 126
G + G G+ SGW SSS H G Q SG G +G +H +GS HS
Sbjct: 1368 --GSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHS 1424
Score = 35.8 bits (81), Expect = 0.087
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Query: 18 SAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSV 77
S ++TF++ G + S +H S ++ + +G S PS RH S
Sbjct: 1785 STSGQSSTFDQEGSSTGQSS-----SHGQHGSGSSQSSSYGQQGSG-SGQSPSRGRHGS- 1837
Query: 78 DSGVSKGAYAGITGNPSGWHSSSRGH-DGMSQRSGGGTGNHRHWNGSFHSRKG 129
G + G G+ SGW SSS H G Q SG G W S +++ G
Sbjct: 1838 --GSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHG 1888
Score = 35.8 bits (81), Expect = 0.087
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Query: 18 SAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSV 77
S ++TF++ G + S +H S ++ + +G S PS RH S
Sbjct: 2255 STSGQSSTFDQEGSSTGQSS-----SHGQHGSGSSQSSSYGQQGSG-SGQSPSRGRHGS- 2307
Query: 78 DSGVSKGAYAGITGNPSGWHSSSRGH-DGMSQRSGGGTGNHRHWNGSFHSRKG 129
G + G G+ SGW SSS H G Q SG G W S +++ G
Sbjct: 2308 --GSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHG 2358
Score = 35.0 bits (79), Expect = 0.15
Identities = 39/134 (29%), Positives = 51/134 (38%), Gaps = 27/134 (20%)
Query: 13 FSTPQSAKSPTATFEKHGEHLPRGEGRFGVSRR--RHNSSDGFFNN------------GP 58
+S S S ++ + KHG R G S R +H SS G ++ G
Sbjct: 713 YSQHGSGSSHSSGYRKHGS-------RSGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGH 765
Query: 59 LRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSGWH-SSSRGHDGMSQRSGGGTGNH 117
R S H PS RH G S G + + SG SSS GH G G H
Sbjct: 766 GRQGSGSGHSPSRVRH-----GSSSGHSSSHGQHGSGTSCSSSCGHYESGSGQASGFGQH 820
Query: 118 RHWNGSFHSRKGCA 131
+G +S+ G A
Sbjct: 821 ESGSGQGYSQHGSA 834
Score = 35.0 bits (79), Expect = 0.15
Identities = 36/140 (25%), Positives = 51/140 (36%), Gaps = 36/140 (25%)
Query: 13 FSTPQSAKSPTATFEKHGEHLPRGEG------RFGVSRR--RHNSSDGFFN--------- 55
F +S+ ++++ +HG G R G S R RH SS G +
Sbjct: 2107 FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGS 2166
Query: 56 ---NGPLRTAGDSWHQPSLFRHDSVDS--------------GVSKGAYAGITGNPS--GW 96
+G R S H PS RH S S+G Y +G+ S G
Sbjct: 2167 RQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQ 2226
Query: 97 HSSSRGHDGMSQRSGGGTGN 116
H S GH + G G+G+
Sbjct: 2227 HESGSGHSSAYSQHGSGSGH 2246
Score = 33.9 bits (76), Expect = 0.33
Identities = 43/145 (29%), Positives = 57/145 (39%), Gaps = 35/145 (24%)
Query: 13 FSTPQSAKSPTATFEKHGEHLPRGEG------RFGVSRR--RHNSSDGFFNN-------- 56
FS +S+ ++ + +HG G R G S R RH SS G ++
Sbjct: 231 FSQHKSSSGQSSGYSQHGSGSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQHGSGS 290
Query: 57 ----GPLRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSGWHSSSRGH--DGMSQRS 110
G R S PS RH S G + G G+ S + S SRGH G Q S
Sbjct: 291 RQSLGHGRQGSGSRQSPSHVRHGS---GSGHSSSHGQHGSGSSY-SYSRGHYESGSGQTS 346
Query: 111 GGG---------TGNHRHWNGSFHS 126
G G +G +H +GS HS
Sbjct: 347 GFGQHESGSGQSSGYSKHGSGSGHS 371
Score = 33.9 bits (76), Expect = 0.33
Identities = 39/132 (29%), Positives = 54/132 (40%), Gaps = 30/132 (22%)
Query: 18 SAKSPTATFEKHGEHL---PRGEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWH------- 67
S ++++E+HG RGE R G S +SS G +G ++ G H
Sbjct: 1419 SGSGHSSSYEQHGSRSGQSSRGE-RHG-SSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQS 1476
Query: 68 -QPSLFRHDSVDSGVSKGAYAGITGNPSGW------------HSSSRGHDGMSQRSGGGT 114
PS RH S G + + G+ SGW HSS GH RSG +
Sbjct: 1477 PSPSRGRHGS---GSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGLGH--RESRSGQSS 1531
Query: 115 GNHRHWNGSFHS 126
G +H + S HS
Sbjct: 1532 GYGQHGSSSGHS 1543
Score = 33.1 bits (74), Expect = 0.56
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 21/126 (16%)
Query: 18 SAKSPTATFEKHGEHLPRGE--GRFGVSRRRHNSSDGFFNNGPLRTA------GDSWHQP 69
S+ ++T +HG + G+ G + + +SS G +G +++ S P
Sbjct: 602 SSSGHSSTHGQHGSTSGQSSSCGQHGATSGQ-SSSHGQHGSGSSQSSRYGQQGSGSGQSP 660
Query: 70 SLFRHDSVDSGVSKGAYAGITGNPSGWHSSSRGHDGMSQRSGG---------GTGNHRHW 120
S RH S D G S G G+ SGW SS+ H +S +S G +G +H
Sbjct: 661 SRGRHGS-DFGHSSSY--GQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHG 717
Query: 121 NGSFHS 126
+GS HS
Sbjct: 718 SGSSHS 723
Score = 32.3 bits (72), Expect = 0.96
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 13/116 (11%)
Query: 18 SAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSV 77
S +++ +HG L G FG H SS G ++ +G S H +H S
Sbjct: 2086 SGSGRSSSSGQHGPGLGESSG-FG----HHESSSGQSSSYSQHGSG-SGHSSGYGQHGSR 2139
Query: 78 DSGVSKGAYAGITGNPS---GWHSS----SRGHDGMSQRSGGGTGNHRHWNGSFHS 126
S+G G + S G H S S GH SG RH +GS HS
Sbjct: 2140 SGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGSGHS 2195
Score = 32.0 bits (71), Expect = 1.3
Identities = 36/116 (31%), Positives = 46/116 (39%), Gaps = 20/116 (17%)
Query: 29 HGEHLPRGEGRFGVSRRRHNSSDGFFNN-GPLRTAGDSW------------HQPSLFRHD 75
HG+H SR RH S G ++ GP R+ G W H L +
Sbjct: 996 HGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYRS-GSGWSSSRGPYESGSGHSSGLGHRE 1054
Query: 76 SVDSGVSKGAYAGITGNPSGWHSSSRGHDGMSQRSGGGTGNHRHWNG--SFHSRKG 129
S SG S G G G+ SG HSS+ G G + G H +G S H + G
Sbjct: 1055 S-RSGQSSGY--GQHGSSSG-HSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHG 1106
Score = 30.8 bits (68), Expect = 2.8
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 4/87 (4%)
Query: 36 GEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSG 95
G G S H+ S + ++G + S H S +H S S+G G S
Sbjct: 1862 GSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHG----SSS 1917
Query: 96 WHSSSRGHDGMSQRSGGGTGNHRHWNG 122
SSS G G R G G H +G
Sbjct: 1918 GSSSSYGQHGSGSRQSLGHGQHGSGSG 1944
Score = 30.8 bits (68), Expect = 2.8
Identities = 35/140 (25%), Positives = 49/140 (35%), Gaps = 36/140 (25%)
Query: 13 FSTPQSAKSPTATFEKHGEHLPRGEG------RFGVSRR--RHNSSDGFFNN-------- 56
F +S+ ++++ +HG G R G S R RH SS G ++
Sbjct: 2577 FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGS 2636
Query: 57 ----GPLRTAGDSWHQPSLFRHDS--------------VDSGVSKGAYAGITGNPS--GW 96
G R S PS RH S S+G Y G+ S G
Sbjct: 2637 RQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRLGHSSVFGQ 2696
Query: 97 HSSSRGHDGMSQRSGGGTGN 116
H S GH + G G+G+
Sbjct: 2697 HESGSGHSSAYSQHGSGSGH 2716
Score = 30.4 bits (67), Expect = 3.7
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 12/100 (12%)
Query: 18 SAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSV 77
S +SP+ G G+ G S ++ S G + +G +T+G H+
Sbjct: 303 SRQSPSHVRHGSGSGHSSSHGQHG-SGSSYSYSRGHYESGSGQTSGFGQHESG----SGQ 357
Query: 78 DSGVSKGAYAGITGNPSGWHSSSRGHDGMSQRSGGGTGNH 117
SG SK G+ SG HSSS+G G + +G H
Sbjct: 358 SSGYSKH------GSGSG-HSSSQGQHGSTSGQASSSGQH 390
Score = 30.4 bits (67), Expect = 3.7
Identities = 37/124 (29%), Positives = 47/124 (37%), Gaps = 35/124 (28%)
Query: 29 HGEHLPRGEGRFGV-----SRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSVDSG--V 81
HG+H G GR SR H+S G +G S H + +H S SG
Sbjct: 1258 HGQH-GSGSGRSSSRGPYESRSGHSSVFGQHESG-------SGHSSAYSQHGS-GSGHFC 1308
Query: 82 SKGAYAGITGNPSGW--------HSSSRGHDGMSQRSGGGTGNH-----------RHWNG 122
S+G + +G S + SSS GH G G G H RH +G
Sbjct: 1309 SQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSPSRGRHGSG 1368
Query: 123 SFHS 126
S HS
Sbjct: 1369 SGHS 1372
Score = 30.4 bits (67), Expect = 3.7
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 4/87 (4%)
Query: 36 GEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSG 95
G G S H+ S + ++G + S H S +H S S+G G S
Sbjct: 1392 GSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHG----SSS 1447
Query: 96 WHSSSRGHDGMSQRSGGGTGNHRHWNG 122
SSS G G R G G H +G
Sbjct: 1448 GSSSSYGQHGSGSRQSLGHGQHGSGSG 1474
Score = 30.4 bits (67), Expect = 3.7
Identities = 33/115 (28%), Positives = 43/115 (37%), Gaps = 18/115 (15%)
Query: 29 HGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLRTAGDSW------------HQPSLFRHDS 76
HG+H SR RH S G ++ +G W H L +S
Sbjct: 1466 HGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGLGHRES 1525
Query: 77 VDSGVSKGAYAGITGNPSGWHSSSRGHDGMSQRSGGGTGNHRHWNG--SFHSRKG 129
SG S G G G+ SG HSS+ G G + G H +G S H + G
Sbjct: 1526 -RSGQSSGY--GQHGSSSG-HSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHG 1576
Score = 30.4 bits (67), Expect = 3.7
Identities = 33/116 (28%), Positives = 44/116 (37%), Gaps = 13/116 (11%)
Query: 18 SAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSV 77
S +++ +HG L G FG H SS G ++ +G S H +H S
Sbjct: 1616 SGSGRSSSSGQHGSGLGESSG-FG----HHESSSGQSSSYSQHGSG-SGHSSGYGQHGSR 1669
Query: 78 DSGVSKGAYAGITGNPS---GWHSS----SRGHDGMSQRSGGGTGNHRHWNGSFHS 126
S+G G + S G H S S GH SG RH +G HS
Sbjct: 1670 SGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHS 1725
Score = 30.4 bits (67), Expect = 3.7
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 4/87 (4%)
Query: 36 GEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSG 95
G G S H+ S + ++G + S H S +H S S+G G S
Sbjct: 2332 GSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGERHG----SSS 2387
Query: 96 WHSSSRGHDGMSQRSGGGTGNHRHWNG 122
SSS G G R G G H +G
Sbjct: 2388 GSSSSYGQHGSGSRQSLGHGQHGSGSG 2414
Score = 30.4 bits (67), Expect = 3.7
Identities = 33/115 (28%), Positives = 43/115 (37%), Gaps = 18/115 (15%)
Query: 29 HGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLRTAGDSW------------HQPSLFRHDS 76
HG+H SR RH S G ++ +G W H L +S
Sbjct: 2406 HGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRES 2465
Query: 77 VDSGVSKGAYAGITGNPSGWHSSSRGHDGMSQRSGGGTGNHRHWNG--SFHSRKG 129
SG S G G G+ SG HSS+ G G + G H +G S H + G
Sbjct: 2466 -RSGQSSGY--GQHGSSSG-HSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHG 2516
Score = 30.4 bits (67), Expect = 3.7
Identities = 33/116 (28%), Positives = 44/116 (37%), Gaps = 13/116 (11%)
Query: 18 SAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSV 77
S +++ +HG L G FG H SS G ++ +G S H +H S
Sbjct: 2556 SGSGRSSSSGQHGSGLGESSG-FG----HHESSSGQSSSYSQHGSG-SGHSSGYGQHGSR 2609
Query: 78 DSGVSKGAYAGITGNPS---GWHSS----SRGHDGMSQRSGGGTGNHRHWNGSFHS 126
S+G G + S G H S S GH SG RH +G HS
Sbjct: 2610 SGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHS 2665
Score = 30.0 bits (66), Expect = 4.8
Identities = 43/161 (26%), Positives = 64/161 (39%), Gaps = 42/161 (26%)
Query: 18 SAKSPTATFEKHGE--HLPRGEGRFGV------SRRRHNSSDGFFNNGPLRTAGDSWH-- 67
S+ ++++ +HG H G GR G SR RH SS G ++ +G S
Sbjct: 744 SSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCSSS 803
Query: 68 ---------QPSLF-RHDSVDS------GVSKGAYA--GITGNPSGWHSSSRGHDGMSQR 109
Q S F +H+S G + G ++ G G+ SG SSS HD S +
Sbjct: 804 CGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSSGQHDSSSGQ 863
Query: 110 SGG----------GTGNHRHWNGS----FHSRKGCAFQEKP 136
S +G RH +GS H ++G + P
Sbjct: 864 SSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSP 904
Score = 30.0 bits (66), Expect = 4.8
Identities = 35/140 (25%), Positives = 52/140 (37%), Gaps = 36/140 (25%)
Query: 13 FSTPQSAKSPTATFEKHGEHLPRGEG------RFGVSRR--RHNSSD------GFFNNGP 58
F +S+ ++++ +HG G R G S R RH SS G +G
Sbjct: 1637 FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGS 1696
Query: 59 LRTAGD------SWHQPSLFRHDS--------------VDSGVSKGAYAGITGNPS--GW 96
+++G S PS RH S S+G Y +G+ S G
Sbjct: 1697 RQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQ 1756
Query: 97 HSSSRGHDGMSQRSGGGTGN 116
H S GH + G G+G+
Sbjct: 1757 HESGSGHSSAYSQHGSGSGH 1776
Score = 30.0 bits (66), Expect = 4.8
Identities = 33/115 (28%), Positives = 43/115 (37%), Gaps = 18/115 (15%)
Query: 29 HGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLRTAGDSW------------HQPSLFRHDS 76
HG+H SR RH S G ++ +G W H L +S
Sbjct: 1936 HGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSRGPYESGSGHSSGLGHRES 1995
Query: 77 VDSGVSKGAYAGITGNPSGWHSSSRGHDGMSQRSGGGTGNHRHWNG--SFHSRKG 129
SG S G G G+ SG HSS+ G G + G H +G S H + G
Sbjct: 1996 -RSGQSSGY--GQHGSSSG-HSSTHGQHGSASGQSSSCGQHGASSGQSSSHGQHG 2046
Score = 29.6 bits (65), Expect = 6.2
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 14/117 (11%)
Query: 13 FSTPQSAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLR--TAGDSWHQPS 70
F +S+ ++++ +HG G +G +H S G + G ++G S H
Sbjct: 1167 FGHHESSSGQSSSYSQHGSGSGHSSG-YG----QHGSRSGQSSRGERHGSSSGSSSH--- 1218
Query: 71 LFRHDSVDSGVSKGAYAGITGNPSGWHSSSRGHDGMSQRSGGGTGNHRHWNGSFHSR 127
+ SG + + G G+ SG HS SRG G G H +G SR
Sbjct: 1219 ---YGQHGSGSRQSSGHGRQGSGSG-HSPSRGRHGSGLGHSSSHGQHGSGSGRSSSR 1271
Score = 29.3 bits (64), Expect = 8.1
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 25/114 (21%)
Query: 13 FSTPQSAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLF 72
F +S ++ + +HG G G F S+ +H S+ G + G S Q S
Sbjct: 1754 FGQHESGSGHSSAYSQHGS----GSGHF-CSQGQHGSTSG--QSSTFDQEGSSTGQSS-- 1804
Query: 73 RHDSVDSGVSKGAYAGITGNPSGWHSSSRGHDGMSQRSGGGTGNHRHWNGSFHS 126
H SG S+ + G G+ SG S SRG RH +GS HS
Sbjct: 1805 SHGQHGSGSSQSSSYGQQGSGSG-QSPSRG---------------RHGSGSGHS 1842
Score = 29.3 bits (64), Expect = 8.1
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 25/114 (21%)
Query: 13 FSTPQSAKSPTATFEKHGEHLPRGEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLF 72
F +S ++ + +HG G G F S+ +H S+ G + G S Q S
Sbjct: 2224 FGQHESGSGHSSAYSQHGS----GSGHF-CSQGQHGSTSG--QSSTFDQEGSSTGQSS-- 2274
Query: 73 RHDSVDSGVSKGAYAGITGNPSGWHSSSRGHDGMSQRSGGGTGNHRHWNGSFHS 126
H SG S+ + G G+ SG S SRG RH +GS HS
Sbjct: 2275 SHGQHGSGSSQSSSYGQQGSGSG-QSPSRG---------------RHGSGSGHS 2312
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 37.0 bits (84), Expect = 0.039
Identities = 48/179 (26%), Positives = 63/179 (35%), Gaps = 37/179 (20%)
Query: 164 PEAGKQHQP-CRPIGTPSGVWENPPSAKQPSKMLVIKKVSKEDPAAAF------------ 210
P GKQH P PI S P K P+ + + P A F
Sbjct: 247 PNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPA 306
Query: 211 -----SAAFTSPG-----------SHHANGNKLSSVVPSVYKN--LVPKP--VPPPSKPN 250
+A+ + PG S HA G + + P K L P P +PP S
Sbjct: 307 LRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSA 366
Query: 251 AWKANRMEHKSGSLSSSRESAFTSPISVTKPVVLASGAALSSPKESPSSTTPPIEISSS 309
R + S S SS+ S+ +S S + AS A S P P PP +S S
Sbjct: 367 PAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFP----PPTSLSVS 421
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 37.0 bits (84), Expect = 0.039
Identities = 48/179 (26%), Positives = 63/179 (35%), Gaps = 37/179 (20%)
Query: 164 PEAGKQHQP-CRPIGTPSGVWENPPSAKQPSKMLVIKKVSKEDPAAAF------------ 210
P GKQH P PI S P K P+ + + P A F
Sbjct: 247 PNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPA 306
Query: 211 -----SAAFTSPG-----------SHHANGNKLSSVVPSVYKN--LVPKP--VPPPSKPN 250
+A+ + PG S HA G + + P K L P P +PP S
Sbjct: 307 LRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSA 366
Query: 251 AWKANRMEHKSGSLSSSRESAFTSPISVTKPVVLASGAALSSPKESPSSTTPPIEISSS 309
R + S S SS+ S+ +S S + AS A S P P PP +S S
Sbjct: 367 PAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFP----PPTSLSVS 421
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 37.0 bits (84), Expect = 0.039
Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 35/196 (17%)
Query: 177 GTP-SGVWENPPS--AKQPSKMLVIKKVSKEDPAAAFSAAFTSPGSHHANGNKLSS---- 229
G P S V E P S A+QPS + ++ + +++ S++ +S S ++ + SS
Sbjct: 2500 GVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSS 2559
Query: 230 ----------VVPSVYKNLVPKPVPPPSK-------PNAWKANRMEHKSGSLSS------ 266
V P V VP P P P + P A R S S SS
Sbjct: 2560 SSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSS 2619
Query: 267 -SRESAFTSPISVTKPVVLASGAALSSPKESPSSTTP---PIEISSSRLTKLTRRTTDRK 322
S S+ +S S + +S ++ SS SP+ P P S + RR+ +
Sbjct: 2620 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPR 2679
Query: 323 SEFLKTLKDDRNGDFS 338
+ +L+D R+ +S
Sbjct: 2680 KP-IDSLRDSRSLSYS 2694
Score = 31.2 bits (69), Expect = 2.1
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 160 PSLNP---EAGKQHQPCRPIGTPSGVWENPPSAKQPSKMLVIKKVSKEDPAAAFSAAFTS 216
PS P EA ++ +P P TP+ S+ S S +++ S++ +S
Sbjct: 2580 PSPTPAPKEAVREGRPPEP--TPAKRKRRSSSSSSSSS----SSSSSSSSSSSSSSSSSS 2633
Query: 217 PGSHHANGNKLSSVVPSVYK---NLVPKPVPPPSKPNAWKANRMEHKS-GSLSSSRESAF 272
S ++ + SS PS K +PKP P P + +R K SL SR ++
Sbjct: 2634 SSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSY 2693
Query: 273 TSPISVTKPVVLASGAALSSPKESPSSTT 301
SP+ +P + SP++ SS++
Sbjct: 2694 -SPVERRRP------SPQPSPRDQQSSSS 2715
Score = 30.4 bits (67), Expect = 3.7
Identities = 38/160 (23%), Positives = 59/160 (36%), Gaps = 20/160 (12%)
Query: 202 SKEDPAAAFSAAFTSPGSHHANGNKLSSVVPSVYKNLVPKPVPPPSKPNAWKANRMEHKS 261
S E ++ S+ P S A SS P P+ S P + R+ +S
Sbjct: 1648 SPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRS 1707
Query: 262 GSLSSSRESAFTSP--------ISVTKPVVLASGA----ALSSPK--------ESPSSTT 301
S SSS E+ +P +S +P + + + SSP+ SPS
Sbjct: 1708 RSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKP 1767
Query: 302 PPIEISSSRLTKLTRRTTDRKSEFLKTLKDDRNGDFSENR 341
++ S SR + RTT R+ + R S +R
Sbjct: 1768 RGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSR 1807
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 36.6 bits (83), Expect = 0.051
Identities = 75/349 (21%), Positives = 116/349 (33%), Gaps = 41/349 (11%)
Query: 43 SRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPS-GWHSSSR 101
SR R S G ++ PLR+ Q +A G P G S+S
Sbjct: 591 SRSRSPDSSGSRSHSPLRSKQRDVAQAR--------------THANPRGRPKMGSRSTSE 636
Query: 102 GHDGMSQRSGGGTGNHRHWNGSFHSR-KGCAFQEKPPMEIREEKKEDKVEKLQFEEEDFP 160
RS + N R SR ++ E +E V +LQ E P
Sbjct: 637 SRSRSRSRSRSASSNSRKSLSPGVSRDSSTSYTETKDPSSGQEVATPPVPQLQVCE---P 693
Query: 161 SLNPEAGKQHQPCRPIGTPSGVWENPPSAKQPSKMLVIKKVSKE--DPAAAFSAAFTSPG 218
R + P ++ QP + K ++E PAA +
Sbjct: 694 KERTSTSSSSVQARRLSQPESAEKHVTQRLQPERGSPKKCEAEEAEPPAATQPQTSETQT 753
Query: 219 SH-------HANGNKLSSVVPSVYKNLVPKPVPPPSKPNAWKANRMEHKSGSLSSSRESA 271
SH H + V +N VP P P A + + + GS+ +
Sbjct: 754 SHLPESERIHHTVEEKEEVTMDTSENRPENDVPEPPMPIADQVSNDDRPEGSVEDEEKKE 813
Query: 272 FTSPISVTKPVVLASGAALSSPKESPS--STTPPIEISSSRLTKLTRRTTDRK------S 323
+ P S + + + +S+ K P+ S T + R + TT +K +
Sbjct: 814 SSLPKSFKRKI-----SVVSATKGVPAGNSDTEGGQPGRKRRWGASTATTQKKPSISITT 868
Query: 324 EFLKTLKDDRNGDFSENRDCDKLEDLEDNSTPEPKENGEEGCHQNGLAL 372
E LK+L D + D D S E + NG++G H GL +
Sbjct: 869 ESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDDGTHDKGLKI 917
>gi|186928829 dermokine isoform 4 precursor [Homo sapiens]
Length = 386
Score = 36.2 bits (82), Expect = 0.067
Identities = 29/106 (27%), Positives = 36/106 (33%), Gaps = 7/106 (6%)
Query: 36 GEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSG 95
G G + S G +NG S S S G S G+ G +GN G
Sbjct: 240 GSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSS----GSSSGGSSGGSSGGSSGNSGG 295
Query: 96 WHSSSRGHDGMSQRSGGGTGNHRHWNGSFHSRKGCAFQEKPPMEIR 141
S +G +GNH G + GC EKP E R
Sbjct: 296 SRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGC---EKPGNEAR 338
>gi|186928827 dermokine isoform 5 precursor [Homo sapiens]
Length = 398
Score = 36.2 bits (82), Expect = 0.067
Identities = 29/106 (27%), Positives = 36/106 (33%), Gaps = 7/106 (6%)
Query: 36 GEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSG 95
G G + S G +NG S S S G S G+ G +GN G
Sbjct: 240 GSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSS----GSSSGGSSGGSSGGSSGNSGG 295
Query: 96 WHSSSRGHDGMSQRSGGGTGNHRHWNGSFHSRKGCAFQEKPPMEIR 141
S +G +GNH G + GC EKP E R
Sbjct: 296 SRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGC---EKPGNEAR 338
>gi|186928825 dermokine isoform 3 precursor [Homo sapiens]
Length = 416
Score = 36.2 bits (82), Expect = 0.067
Identities = 29/106 (27%), Positives = 36/106 (33%), Gaps = 7/106 (6%)
Query: 36 GEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSG 95
G G + S G +NG S S S G S G+ G +GN G
Sbjct: 240 GSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSS----GSSSGGSSGGSSGGSSGNSGG 295
Query: 96 WHSSSRGHDGMSQRSGGGTGNHRHWNGSFHSRKGCAFQEKPPMEIR 141
S +G +GNH G + GC EKP E R
Sbjct: 296 SRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGC---EKPGNEAR 338
>gi|33504489 dermokine isoform 2 precursor [Homo sapiens]
Length = 476
Score = 36.2 bits (82), Expect = 0.067
Identities = 29/106 (27%), Positives = 36/106 (33%), Gaps = 7/106 (6%)
Query: 36 GEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSG 95
G G + S G +NG S S S G S G+ G +GN G
Sbjct: 240 GSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSS----GSSSGGSSGGSSGGSSGNSGG 295
Query: 96 WHSSSRGHDGMSQRSGGGTGNHRHWNGSFHSRKGCAFQEKPPMEIR 141
S +G +GNH G + GC EKP E R
Sbjct: 296 SRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGC---EKPGNEAR 338
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 36.2 bits (82), Expect = 0.067
Identities = 62/266 (23%), Positives = 100/266 (37%), Gaps = 42/266 (15%)
Query: 133 QEKPPMEIREE-KKEDKVEKLQFEEE---DFPSLNPEAGKQHQPCRPIGTPSGVWENPPS 188
+E PP E+++E KKE+K E + E+E + L +A K P P+ + P
Sbjct: 702 KETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPK 761
Query: 189 A--------------KQPSKMLVIKKVSK--EDPAAAFSAAFTSPGSHHANGNKLSSVVP 232
K+ K+ VIKK K E AAA T+ A G ++++ P
Sbjct: 762 KEESVKKDSVAAGKPKEKGKIKVIKKEGKAAEAVAAAVGTGATTAAVMAAAG--IAAIGP 819
Query: 233 S----VYKNLVPKPVPPPSKPNAWKANRMEHKSGSLSSSRESAFTSPISVTKPV----VL 284
+ ++L+ P KA ++ + T+PV +
Sbjct: 820 AKELEAERSLMSSPEDLTKDFEELKAEEVDVTKDIKPQLELIEDEEKLKETEPVEAYVIQ 879
Query: 285 ASGAALSSPKESPS---STTP---PIEISSSRLTKLTRRTTDRKSEFLKTLKDDRNGDFS 338
P ESP +TT E + L + ++ D +F +D F
Sbjct: 880 KEREVTKGPAESPDEGITTTEGEGECEQTPEELEPVEKQGVDDIEKF-----EDEGAGFE 934
Query: 339 ENRDC-DKLEDLEDNSTPEPKENGEE 363
E+ + D E E EP+E+GEE
Sbjct: 935 ESSETGDYEEKAETEEAEEPEEDGEE 960
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 36.2 bits (82), Expect = 0.067
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 14/104 (13%)
Query: 281 PVVLASGAALSSPKESPSSTTPPIEISSSRLTKLTRRTTDRKSEFLKTLKDDRNGDFSEN 340
P A+ AA ++ S S PP+E+ RL + RR R+ K + R G +E
Sbjct: 64 PGTAAAAAAAAAASSSCFSPGPPLEVK--RLARGKRRAGGRQ----KRRRGPRAGQEAEK 117
Query: 341 RDCDKLEDLEDNSTPEPKENGEEGCHQNGLALPVVEEGEVLSHS 384
R L P+P+++G G G P+VE +V S S
Sbjct: 118 RRVFSL--------PQPQQDGGGGASSGGGVTPLVEYEDVSSQS 153
Score = 35.0 bits (79), Expect = 0.15
Identities = 69/336 (20%), Positives = 122/336 (36%), Gaps = 52/336 (15%)
Query: 38 GRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSGWH 97
GR R H DG G S S RH ++ A +G + + SG
Sbjct: 207 GRSKERHREHRRRDG--------QRGGSEASKSRSRHSHSGEERAEVAKSG-SSSSSGGR 257
Query: 98 SSSRGHDGMSQRSGGGTGNHRHWNGSFHSRKGCAFQEKPPMEIREEKKEDKVEKLQFEEE 157
S S S + H + + S++ + ++PP RE+K E K + +
Sbjct: 258 RKSASATSSSSSSRKDRDSKAHRSRTKSSKEPPSAYKEPPKAYREDKTEPKAYRRR---- 313
Query: 158 DFPSLNPEAGKQHQP----------CRPIGTPSGVWENPPSAKQPSKMLVIKKVSKEDPA 207
SL+P G+ P R +P+G +P S + P
Sbjct: 314 --RSLSPLGGRDDSPVSHRASQSLRSRKSPSPAGGGSSPYSRRLPRS------------P 359
Query: 208 AAFSAAFTSPGSHHANGNKLSSVVPSVYKNLVPKPVPPPSKPNAWKANRMEHKSGSLSSS 267
+ +S + S H++ + V PS Y + ++W+ +R + S L S
Sbjct: 360 SPYSRRRSPSYSRHSSYERGGDVSPSPYSS------------SSWRRSRSPY-SPVLRRS 406
Query: 268 RESAFTSPISVTKPVVLASGAALSSPKESPSSTTP-PIEISSSRLTKLTRRTTDRKSEFL 326
+S SP S ++ S LS + SS +P + + SS +L + R +E
Sbjct: 407 GKSRSRSPYS-SRHSRSRSRHRLSRSRSRHSSISPSTLTLKSSLAAELNKNKKARAAEAA 465
Query: 327 KTLKDDRNGDFSENRDCDKLEDLEDNSTPEPKENGE 362
+ + + + ++ + N++ K N E
Sbjct: 466 RAAEAAKAAEATKAAEAAAKAAKASNTSTPTKGNTE 501
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 36.2 bits (82), Expect = 0.067
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 14/104 (13%)
Query: 281 PVVLASGAALSSPKESPSSTTPPIEISSSRLTKLTRRTTDRKSEFLKTLKDDRNGDFSEN 340
P A+ AA ++ S S PP+E+ RL + RR R+ K + R G +E
Sbjct: 64 PGTAAAAAAAAAASSSCFSPGPPLEVK--RLARGKRRAGGRQ----KRRRGPRAGQEAEK 117
Query: 341 RDCDKLEDLEDNSTPEPKENGEEGCHQNGLALPVVEEGEVLSHS 384
R L P+P+++G G G P+VE +V S S
Sbjct: 118 RRVFSL--------PQPQQDGGGGASSGGGVTPLVEYEDVSSQS 153
Score = 35.0 bits (79), Expect = 0.15
Identities = 69/336 (20%), Positives = 122/336 (36%), Gaps = 52/336 (15%)
Query: 38 GRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSGWH 97
GR R H DG G S S RH ++ A +G + + SG
Sbjct: 207 GRSKERHREHRRRDG--------QRGGSEASKSRSRHSHSGEERAEVAKSG-SSSSSGGR 257
Query: 98 SSSRGHDGMSQRSGGGTGNHRHWNGSFHSRKGCAFQEKPPMEIREEKKEDKVEKLQFEEE 157
S S S + H + + S++ + ++PP RE+K E K + +
Sbjct: 258 RKSASATSSSSSSRKDRDSKAHRSRTKSSKEPPSAYKEPPKAYREDKTEPKAYRRR---- 313
Query: 158 DFPSLNPEAGKQHQP----------CRPIGTPSGVWENPPSAKQPSKMLVIKKVSKEDPA 207
SL+P G+ P R +P+G +P S + P
Sbjct: 314 --RSLSPLGGRDDSPVSHRASQSLRSRKSPSPAGGGSSPYSRRLPRS------------P 359
Query: 208 AAFSAAFTSPGSHHANGNKLSSVVPSVYKNLVPKPVPPPSKPNAWKANRMEHKSGSLSSS 267
+ +S + S H++ + V PS Y + ++W+ +R + S L S
Sbjct: 360 SPYSRRRSPSYSRHSSYERGGDVSPSPYSS------------SSWRRSRSPY-SPVLRRS 406
Query: 268 RESAFTSPISVTKPVVLASGAALSSPKESPSSTTP-PIEISSSRLTKLTRRTTDRKSEFL 326
+S SP S ++ S LS + SS +P + + SS +L + R +E
Sbjct: 407 GKSRSRSPYS-SRHSRSRSRHRLSRSRSRHSSISPSTLTLKSSLAAELNKNKKARAAEAA 465
Query: 327 KTLKDDRNGDFSENRDCDKLEDLEDNSTPEPKENGE 362
+ + + + ++ + N++ K N E
Sbjct: 466 RAAEAAKAAEATKAAEAAAKAAKASNTSTPTKGNTE 501
>gi|68508961 centromere protein C 1 [Homo sapiens]
Length = 943
Score = 35.8 bits (81), Expect = 0.087
Identities = 38/164 (23%), Positives = 60/164 (36%), Gaps = 15/164 (9%)
Query: 97 HSSSRGHDGMSQRSGGGTGNHRHWNGSFHSRKGCAFQEKPPMEIREEKKEDKVEKLQFEE 156
H+S D + S H S+K R++K+E K K +F
Sbjct: 445 HTSHITQDEFQRNSDRNMEEHEEMGNDCVSKKQMPPVGSKKSSTRKDKEESK--KKRFSS 502
Query: 157 EDFPSLNPEAGKQHQPCRPIGTPSGVWENPPSAKQPSKMLVIKKVSKEDPAAAFSAAFTS 216
E L PE S V ++ +++PS V+K S+E P + S+
Sbjct: 503 ESKNKLVPEE-----------VTSTVTKSRRISRRPSDWWVVK--SEESPVYSNSSVRNE 549
Query: 217 PGSHHANGNKLSSVVPSVYKNLVPKPVPPPSKPNAWKANRMEHK 260
HH + K + KN+ K +P + A K N+ K
Sbjct: 550 LPMHHNSSRKSTKKTNQSSKNIRKKTIPLKRQKTATKGNQRVQK 593
>gi|148613886 regulatory factor X domain containing 2 [Homo sapiens]
Length = 1460
Score = 35.8 bits (81), Expect = 0.087
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 14/87 (16%)
Query: 221 HANGNKLSSVVPSVYKNLVPKPVPPPSKPNAWKANRMEHKSGSLSSSRESAFTSPISVTK 280
H+NG + + P+ P P P P+ E +GS S SRES S ++ T
Sbjct: 939 HSNGTPIHTPTPTPTPTPTPTPTPTPTS---------EMIAGSQSLSRESP-CSRLAQTT 988
Query: 281 PVVLASGAALSSPKESP----SSTTPP 303
PV A G++ +P +P SS+ PP
Sbjct: 989 PVDSALGSSRHTPIGTPHSNCSSSVPP 1015
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 35.4 bits (80), Expect = 0.11
Identities = 29/94 (30%), Positives = 35/94 (37%), Gaps = 13/94 (13%)
Query: 36 GEGRFGVSRRRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSG 95
G G +G + S G + +G G H S SG S G Y G +G G
Sbjct: 548 GRGSYGSGGSSYGSGGGSYGSGG---GGGG--------HGSYGSGSSSGGYRGGSGGGGG 596
Query: 96 WHSSSRGHDGMSQRSGGGTGNHRHWNGSFHSRKG 129
S RG G S SGG G +G S G
Sbjct: 597 GSSGGRGSGGGS--SGGSIGGRGSSSGGVKSSGG 628
Score = 29.3 bits (64), Expect = 8.1
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 74 HDSVDSGVSKGAYAGITGNPSGWHSSSRGHDGMSQRSGGGTGNHRHWNGSFHSRKG 129
H ++ G S+G G G+ + S G G GGG G++ S+ S G
Sbjct: 509 HTTISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGG 564
>gi|109689723 abl interactor 2 [Homo sapiens]
Length = 475
Score = 35.4 bits (80), Expect = 0.11
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 171 QPCRPIGTPSGVWENPPSAKQPSKMLVIKKVSKEDPAAAFSAAFTSPGSHHA--NGNKLS 228
+P RP P+ +P PS+ ++ S +S++ +S GSH + + ++ +
Sbjct: 196 EPVRPPVVPNDYVPSPTRNMAPSQQSPVRTASVNQRNRTYSSSGSSGGSHPSSRSSSREN 255
Query: 229 SVVPSVYKNLVPKPVPPPSKPNAWKANRMEHKSGSLSSSRESAFT--SPISVTKPVVLAS 286
S SV VP VP PS P+ + + ++ S + +SR + T + +P + S
Sbjct: 256 SGSGSVG---VPIAVPTPSPPSVFPGHPVQFYSMNRPASRHTPPTIGGSLPYRRPPSITS 312
Query: 287 GAALSSP-------KESPSSTTPP 303
+L + ++P S PP
Sbjct: 313 QTSLQNQMNGGPFYSQNPVSLAPP 336
>gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens]
Length = 566
Score = 35.4 bits (80), Expect = 0.11
Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 23/170 (13%)
Query: 140 IREEKKEDKVEKLQFEEEDFPSLNPEAGKQHQPCRPIGT-PSGVWENPPSAKQPSKMLVI 198
++ K+ + +++ E FP L P+ P + P PP+ ++P K L
Sbjct: 7 VKRTKRTGGLYRVRLAERVFPLLGPQGAPPFLEEAPSASLPGAERATPPTREEPGKGLT- 65
Query: 199 KKVSKEDPAAAFSAAFTSPGSHHANGNK-----LSSVVPSVYKNLVPKPVPPPSKPNAWK 253
+ ++E + AA SPG+ G + PS P P P P+KP +
Sbjct: 66 AEAAREQSGSPCRAAGVSPGTGGREGAEWRAGGREGPGPS------PSPSPSPAKPAGAE 119
Query: 254 ANRMEHKSGSLSSSRESAFTSPISVTK-PVVLASGAALSSPKESPSSTTP 302
R + E +SP+S P A+ AA S ++ TP
Sbjct: 120 LRR---------AFLERCLSSPVSAESFPGGAAAVAAFSCSVAPAAAPTP 160
>gi|139394646 iroquois homeobox protein 5 [Homo sapiens]
Length = 483
Score = 35.4 bits (80), Expect = 0.11
Identities = 34/121 (28%), Positives = 45/121 (37%), Gaps = 8/121 (6%)
Query: 184 ENPPSAKQPSKMLVIKKVSKEDPAAAFSAAFTSPGSHHANGN-KLSSVVPSVYKNLVPKP 242
+ PP PS EDPA + A +PG H A G PSV + P P
Sbjct: 265 QGPPRTGGPSPAGPAAARLAEDPAPHYPAGAPAPGPHPAAGEVPPGPGGPSVIHS--PPP 322
Query: 243 VPPP---SKPNAWKANRMEHKSGSLSSSRESAFTSPISVTKPVVL--ASGAALSSPKESP 297
PPP +KP W + S + SP + A G + +SP +P
Sbjct: 323 PPPPAVLAKPKLWSLAEIATSSDKVKDGGGGNEGSPCPPCPGPIAGQALGGSRASPAPAP 382
Query: 298 S 298
S
Sbjct: 383 S 383
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,623,144
Number of Sequences: 37866
Number of extensions: 1247719
Number of successful extensions: 5697
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 5239
Number of HSP's gapped (non-prelim): 664
length of query: 474
length of database: 18,247,518
effective HSP length: 106
effective length of query: 368
effective length of database: 14,233,722
effective search space: 5238009696
effective search space used: 5238009696
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.