Guide to the Human Genome
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Name: TMEM145 Sequence: fasta or formatted (493aa) NCBI GI: 110556629
Description:

transmembrane protein 145

Referenced in:

Cardiovascular System

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         37           3
 C cysteine            1.8          9           2
 D aspartate           3.4         17           2
 E glutamate           3.9         19           2
 F phenylalanine       7.9         39           2
 G glycine             7.1         35           2
 H histidine           1.8          9           1
 I isoleucine          4.9         24           1
 K lysine              3.7         18           1
 L leucine            13.4         66           6
 M methionine          1.6          8           1
 N asparagine          2.6         13           2
 P proline             6.7         33           3
 Q glutamine           3.0         15           1
 R arginine            5.3         26           2
 S serine              7.3         36           3
 T threonine           4.7         23           2
 V valine              6.5         32           2
 W tryptophan          1.6          8           1
 Y tyrosine            5.3         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 145 
GPR180                0.043   G protein-coupled receptor 180 precursor 
PATL1                 0.010   protein associated with topoisomerase II homolog 1 ...
NUP214                0.007   nucleoporin 214kDa 
MMP11                 0.007   matrix metalloproteinase 11 preproprotein 
SRPX                  0.007   sushi-repeat-containing protein, X-linked 
KIAA0528              0.006   hypothetical protein LOC9847 
ZP4                   0.006   zona pellucida glycoprotein 4 preproprotein 
MSX2                  0.005   msh homeobox 2 
CBLL1                 0.005   Cas-Br-M (murine) ecotropic retroviral transforming...
IL20RA                0.005   interleukin 20 receptor, alpha 
FLJ20021              0.005   PREDICTED: hypothetical protein 
FLJ20021              0.005   PREDICTED: hypothetical protein 
FLJ20021              0.005   PREDICTED: hypothetical protein 
SHISA5                0.005   scotin 
CNPY3                 0.005   trinucleotide repeat containing 5 
WIPF1                 0.005   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.005   WAS/WASL interacting protein family, member 1 
GRIN1                 0.005   NMDA receptor 1 isoform NR1-1 precursor 
GRIN1                 0.005   NMDA receptor 1 isoform NR1-3 precursor 
GRIN1                 0.005   NMDA receptor 1 isoform NR1-2 precursor 
SHANK1                0.005   SH3 and multiple ankyrin repeat domains 1 
LOC729991-MEF2B       0.004   myocyte enhancer factor 2B isoform b 
SLC35D2               0.004   solute carrier family 35, member D2 
COL5A1                0.004   alpha 1 type V collagen preproprotein 
ABI3                  0.004   NESH protein isoform 2 
ABI3                  0.004   NESH protein isoform 1 
TTC19                 0.004   tetratricopeptide repeat domain 19 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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