GRIN1 660

Name: GRIN1	Sequence: fasta or formatted (938aa)		NCBI GI: 11038637
Description: NMDA receptor 1 isoform NR1-3 precursor		Referenced in: Glutamate
Other entries for this name: alt prot [901aa] NMDA receptor 1 isoform NR1-2 precursor alt prot [885aa] NMDA receptor 1 isoform NR1-1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 72 3 C cysteine 1.3 12 2 D aspartate 4.4 41 2 E glutamate 6.3 59 5 F phenylalanine 4.4 41 2 G glycine 6.4 60 3 H histidine 2.3 22 1 I isoleucine 5.7 53 2 K lysine 5.8 54 3 L leucine 8.7 82 2 M methionine 3.1 29 2 N asparagine 4.7 44 2 P proline 4.2 39 2 Q glutamine 3.6 34 1 R arginine 6.5 61 3 S serine 7.8 73 2 T threonine 5.8 54 2 V valine 7.1 67 2 W tryptophan 1.6 15 1 Y tyrosine 2.8 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 NMDA receptor 1 isoform NR1-3 precursor GRIN1 0.952 NMDA receptor 1 isoform NR1-2 precursor GRIN1 0.922 NMDA receptor 1 isoform NR1-1 precursor GRIN2B 0.155 N-methyl-D-aspartate receptor subunit 2B precursor ... GRIN2A 0.147 N-methyl-D-aspartate receptor subunit 2A isoform 2 ... GRIN2A 0.147 N-methyl-D-aspartate receptor subunit 2A isoform 1 ... GRIN2A 0.147 N-methyl-D-aspartate receptor subunit 2A isoform 1 pr... GRIN2C 0.134 N-methyl-D-aspartate receptor subunit 2C precursor [... GRIK1 0.130 glutamate receptor, ionotropic, kainate 1 isoform 2 ... GRIN2D 0.129 N-methyl-D-aspartate receptor subunit 2D precursor ... GRIK2 0.126 glutamate receptor, ionotropic, kainate 2 isoform 1 ... GRIK1 0.124 glutamate receptor, ionotropic, kainate 1 isoform 1 p... GRIK2 0.123 glutamate receptor, ionotropic, kainate 2 isoform 2 ... GRIN3A 0.123 glutamate receptor, ionotropic, N-methyl-D-aspartat... GRIK5 0.122 glutamate receptor KA2 precursor GRIK3 0.120 glutamate receptor, ionotropic, kainate 3 precursor ... GRIA1 0.118 glutamate receptor, ionotropic, AMPA 1 isoform 1 [H... GRIA1 0.118 glutamate receptor, ionotropic, AMPA 1 isoform 2 [H... GRIN3B 0.118 glutamate receptor, ionotropic, N-methyl-D-aspartate... GRIK4 0.117 glutamate receptor KA1 precursor GRIA2 0.114 glutamate receptor, ionotropic, AMPA 2 isoform 2 pr... GRIA2 0.113 glutamate receptor, ionotropic, AMPA 2 isoform 3 [H... GRIA2 0.113 glutamate receptor, ionotropic, AMPA 2 isoform 1 pre... GRIA3 0.107 glutamate receptor, ionotrophic, AMPA 3 isoform 2 p... GRIA3 0.106 glutamate receptor, ionotrophic, AMPA 3 isoform 1 p... GRIA4 0.104 glutamate receptor, ionotrophic, AMPA 4 isoform 2 p... GRIA4 0.104 glutamate receptor, ionotrophic, AMPA 4 isoform 1 p... GRID1 0.096 glutamate receptor, ionotropic, delta 1 precursor [H... GRID2 0.093 glutamate receptor, ionotropic, delta 2 CASR 0.019 calcium-sensing receptor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.