Guide to the Human Genome
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Name: ABI3 Sequence: fasta or formatted (366aa) NCBI GI: 7705981
Description:

NESH protein isoform 1

Referenced in:

Fibronectin Family
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [360aa] NESH protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         34           2
 C cysteine            1.6          6           1
 D aspartate           4.4         16           2
 E glutamate           7.1         26           2
 F phenylalanine       2.2          8           2
 G glycine             7.9         29           2
 H histidine           1.4          5           1
 I isoleucine          2.2          8           1
 K lysine              2.7         10           1
 L leucine            10.9         40           2
 M methionine          1.6          6           1
 N asparagine          2.2          8           1
 P proline            14.2         52           5
 Q glutamine           4.1         15           2
 R arginine            5.5         20           2
 S serine              7.4         27           2
 T threonine           6.0         22           2
 V valine              6.3         23           2
 W tryptophan          0.5          2           1
 Y tyrosine            2.5          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NESH protein isoform 1 
ABI3                  0.976   NESH protein isoform 2 
ABI1                  0.346   abl-interactor 1 isoform c 
ABI1                  0.346   abl-interactor 1 isoform d 
ABI2                  0.342   abl interactor 2 
ABI1                  0.340   abl-interactor 1 isoform b 
ABI1                  0.252   abl-interactor 1 isoform a 
DIAPH1                0.071   diaphanous 1 isoform 2 
DIAPH1                0.071   diaphanous 1 isoform 1 
FMN2                  0.066   formin 2 
APBB1IP               0.057   amyloid beta (A4) precursor protein-binding, family ...
INF2                  0.054   inverted formin 2 isoform 2 
INF2                  0.054   inverted formin 2 isoform 1 
SH3RF1                0.054   SH3 domain containing ring finger 1 
FMNL1                 0.053   formin-like 1 
C6orf132              0.051   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.051   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.051   PREDICTED: hypothetical protein LOC647024 
FMNL2                 0.051   formin-like 2 
PRR12                 0.051   proline rich 12 
WASL                  0.050   Wiskott-Aldrich syndrome gene-like protein 
RAPH1                 0.048   Ras association and pleckstrin homology domains 1 is...
FLJ22184              0.047   PREDICTED: hypothetical protein FLJ22184 
WASF2                 0.047   WAS protein family, member 2 
SF3A2                 0.047   splicing factor 3a, subunit 2 
CCNK                  0.047   cyclin K isoform 1 
NACA                  0.047   nascent polypeptide-associated complex alpha subuni...
CPSF6                 0.047   cleavage and polyadenylation specific factor 6, 68 ...
ENAH                  0.046   enabled homolog isoform a 
ENAH                  0.046   enabled homolog isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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