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Search of human proteins with 11038672
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11038672 CD79A antigen isoform 2 precursor [Homo sapiens]
(188 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11038672 CD79A antigen isoform 2 precursor [Homo sapiens] 401 e-112
gi|4502685 CD79A antigen isoform 1 precursor [Homo sapiens] 381 e-106
gi|90193592 CD79B antigen isoform 3 precursor [Homo sapiens] 34 0.065
gi|11038676 CD79B antigen isoform 2 precursor [Homo sapiens] 34 0.065
gi|11038674 CD79B antigen isoform 1 precursor [Homo sapiens] 34 0.065
gi|112790163 metal-regulatory transcription factor 1 [Homo sapiens] 34 0.065
gi|239787787 kin of IRRE like 3 isoform 2 [Homo sapiens] 31 0.55
gi|26006461 kin of IRRE like 3 isoform 1 [Homo sapiens] 31 0.55
gi|224586865 natural cytotoxicity triggering receptor 3 isoform ... 31 0.55
gi|24475832 natural cytotoxicity triggering receptor 3 isoform a... 31 0.55
gi|224586860 natural cytotoxicity triggering receptor 3 isoform ... 31 0.55
gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens] 31 0.72
gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens] 31 0.72
gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens] 31 0.72
gi|4501897 activin A receptor, type IIA precursor [Homo sapiens] 30 1.2
gi|67514036 SH3-domain kinase binding protein 1 isoform b [Homo ... 29 2.7
gi|13994242 SH3-domain kinase binding protein 1 isoform a [Homo ... 29 2.7
gi|229577039 butyrophilin-like 8 isoform 4 precursor [Homo sapiens] 29 2.7
gi|94957742 butyrophilin-like 8 isoform 2 precursor [Homo sapiens] 29 2.7
gi|13376271 butyrophilin-like 8 isoform 1 precursor [Homo sapiens] 29 2.7
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 29 2.7
gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens] 28 3.6
gi|145275174 kin of IRRE-like 2 isoform c [Homo sapiens] 28 3.6
gi|145275172 kin of IRRE-like 2 isoform b [Homo sapiens] 28 3.6
gi|145275170 kin of IRRE-like 2 isoform a [Homo sapiens] 28 3.6
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 28 4.7
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 28 4.7
gi|229089140 leucine rich repeat containing 24 [Homo sapiens] 28 4.7
gi|214830451 sequestosome 1 isoform 2 [Homo sapiens] 28 6.1
gi|214830438 sequestosome 1 isoform 2 [Homo sapiens] 28 6.1
>gi|11038672 CD79A antigen isoform 2 precursor [Homo sapiens]
Length = 188
Score = 401 bits (1030), Expect = e-112
Identities = 188/188 (100%), Positives = 188/188 (100%)
Query: 1 MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN 60
MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN
Sbjct: 1 MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN 60
Query: 61 NANVTWWRVLHGNYTWPPEFLGPGEDPNEPPPRPFLDMGEGTKNRIITAEGIILLFCAVV 120
NANVTWWRVLHGNYTWPPEFLGPGEDPNEPPPRPFLDMGEGTKNRIITAEGIILLFCAVV
Sbjct: 61 NANVTWWRVLHGNYTWPPEFLGPGEDPNEPPPRPFLDMGEGTKNRIITAEGIILLFCAVV 120
Query: 121 PGTLLLFRKRWQNEKLGLDAGDEYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNI 180
PGTLLLFRKRWQNEKLGLDAGDEYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNI
Sbjct: 121 PGTLLLFRKRWQNEKLGLDAGDEYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNI 180
Query: 181 GDVQLEKP 188
GDVQLEKP
Sbjct: 181 GDVQLEKP 188
>gi|4502685 CD79A antigen isoform 1 precursor [Homo sapiens]
Length = 226
Score = 381 bits (978), Expect = e-106
Identities = 187/226 (82%), Positives = 188/226 (83%), Gaps = 38/226 (16%)
Query: 1 MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN 60
MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN
Sbjct: 1 MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN 60
Query: 61 NANVTWWRVLHGNYTWPPEFLGPGEDPN-------------------------------- 88
NANVTWWRVLHGNYTWPPEFLGPGEDPN
Sbjct: 61 NANVTWWRVLHGNYTWPPEFLGPGEDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCG 120
Query: 89 ------EPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGD 142
+PPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGD
Sbjct: 121 TYLRVRQPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGD 180
Query: 143 EYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNIGDVQLEKP 188
EYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNIGDVQLEKP
Sbjct: 181 EYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNIGDVQLEKP 226
>gi|90193592 CD79B antigen isoform 3 precursor [Homo sapiens]
Length = 230
Score = 34.3 bits (77), Expect = 0.065
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 9/62 (14%)
Query: 103 KNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGDEYEDENLYEGLNLDDCSMYE 162
K+ II + ++++ +VP LLL + + K G+ E+++ YEGL++D + YE
Sbjct: 159 KDGIIMIQTLLIILFIIVPIFLLLDK---DDSKAGM------EEDHTYEGLDIDQTATYE 209
Query: 163 DI 164
DI
Sbjct: 210 DI 211
>gi|11038676 CD79B antigen isoform 2 precursor [Homo sapiens]
Length = 125
Score = 34.3 bits (77), Expect = 0.065
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 9/62 (14%)
Query: 103 KNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGDEYEDENLYEGLNLDDCSMYE 162
K+ II + ++++ +VP LLL + + K G+ E+++ YEGL++D + YE
Sbjct: 54 KDGIIMIQTLLIILFIIVPIFLLLDK---DDSKAGM------EEDHTYEGLDIDQTATYE 104
Query: 163 DI 164
DI
Sbjct: 105 DI 106
>gi|11038674 CD79B antigen isoform 1 precursor [Homo sapiens]
Length = 229
Score = 34.3 bits (77), Expect = 0.065
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 9/62 (14%)
Query: 103 KNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGDEYEDENLYEGLNLDDCSMYE 162
K+ II + ++++ +VP LLL + + K G+ E+++ YEGL++D + YE
Sbjct: 158 KDGIIMIQTLLIILFIIVPIFLLLDK---DDSKAGM------EEDHTYEGLDIDQTATYE 208
Query: 163 DI 164
DI
Sbjct: 209 DI 210
>gi|112790163 metal-regulatory transcription factor 1 [Homo sapiens]
Length = 753
Score = 34.3 bits (77), Expect = 0.065
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 40 ASLMVSLGEDAHF--QCPHNSSNNANVTWWRVLHGNYTWPPEFLGPGEDPNEPPPRPFLD 97
ASL S DA P ++ N+A+++ VL + PP+ L P P+ PPP P L
Sbjct: 391 ASLTESFNGDAESVSDVPPSTGNSASLSLPLVLQPGLSEPPQPLLPASAPSAPPPAPSLG 450
Query: 98 MG 99
G
Sbjct: 451 PG 452
>gi|239787787 kin of IRRE like 3 isoform 2 [Homo sapiens]
Length = 600
Score = 31.2 bits (69), Expect = 0.55
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 24 VYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWR 68
VY GP M P SL+V LG DA F C + + + W +
Sbjct: 331 VYFGPR-----MTTEPQSLLVDLGSDAIFSCAWTGNPSLTIVWMK 370
>gi|26006461 kin of IRRE like 3 isoform 1 [Homo sapiens]
Length = 778
Score = 31.2 bits (69), Expect = 0.55
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 24 VYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWR 68
VY GP M P SL+V LG DA F C + + + W +
Sbjct: 331 VYFGPR-----MTTEPQSLLVDLGSDAIFSCAWTGNPSLTIVWMK 370
>gi|224586865 natural cytotoxicity triggering receptor 3 isoform c
[Homo sapiens]
Length = 190
Score = 31.2 bits (69), Expect = 0.55
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 18 LFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWP 77
+ LL + + PG ALW+ + P + G A C N+S R+ G+ TW
Sbjct: 4 MLLLILIMVHPGSCALWVSQ-PPEIRTLEGSSAFLPCSFNASQG------RLAIGSVTWF 56
Query: 78 PEFLGPGEDPNEPPP 92
+ + PG++ P
Sbjct: 57 RDEVVPGKEVRNGTP 71
>gi|24475832 natural cytotoxicity triggering receptor 3 isoform a
[Homo sapiens]
Length = 201
Score = 31.2 bits (69), Expect = 0.55
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 18 LFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWP 77
+ LL + + PG ALW+ + P + G A C N+S R+ G+ TW
Sbjct: 4 MLLLILIMVHPGSCALWVSQ-PPEIRTLEGSSAFLPCSFNASQG------RLAIGSVTWF 56
Query: 78 PEFLGPGEDPNEPPP 92
+ + PG++ P
Sbjct: 57 RDEVVPGKEVRNGTP 71
>gi|224586860 natural cytotoxicity triggering receptor 3 isoform b
[Homo sapiens]
Length = 177
Score = 31.2 bits (69), Expect = 0.55
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 18 LFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWP 77
+ LL + + PG ALW+ + P + G A C N+S R+ G+ TW
Sbjct: 4 MLLLILIMVHPGSCALWVSQ-PPEIRTLEGSSAFLPCSFNASQG------RLAIGSVTWF 56
Query: 78 PEFLGPGEDPNEPPP 92
+ + PG++ P
Sbjct: 57 RDEVVPGKEVRNGTP 71
>gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens]
Length = 520
Score = 30.8 bits (68), Expect = 0.72
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 73 NYTWPPEFLGPGEDPNEPPPRPFL 96
N++ PP F PG P PP PFL
Sbjct: 278 NFSKPPPFFPPGAPPTHLPPPPFL 301
>gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens]
Length = 588
Score = 30.8 bits (68), Expect = 0.72
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 73 NYTWPPEFLGPGEDPNEPPPRPFL 96
N++ PP F PG P PP PFL
Sbjct: 337 NFSKPPPFFPPGAPPTHLPPPPFL 360
>gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens]
Length = 594
Score = 30.8 bits (68), Expect = 0.72
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 73 NYTWPPEFLGPGEDPNEPPPRPFL 96
N++ PP F PG P PP PFL
Sbjct: 352 NFSKPPPFFPPGAPPTHLPPPPFL 375
>gi|4501897 activin A receptor, type IIA precursor [Homo sapiens]
Length = 513
Score = 30.0 bits (66), Expect = 1.2
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 66 WWRVLHGNYTWPPEFLGPGEDPNEPPPRPFLDM 98
+W H +PP L P +DP PPP P L +
Sbjct: 158 FWVYRHHKMAYPP-VLVPTQDPGPPPPSPLLGL 189
>gi|67514036 SH3-domain kinase binding protein 1 isoform b [Homo
sapiens]
Length = 628
Score = 28.9 bits (63), Expect = 2.7
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 12/55 (21%)
Query: 63 NVTWWR--------VLHGNYT--WPPEFLGPGEDPNEPPP--RPFLDMGEGTKNR 105
+V WW V N+ PP+F G P +PPP P + G GT R
Sbjct: 266 DVGWWEGELNGRRGVFPDNFVKLLPPDFEKEGNRPKKPPPPSAPVIKQGAGTTER 320
>gi|13994242 SH3-domain kinase binding protein 1 isoform a [Homo
sapiens]
Length = 665
Score = 28.9 bits (63), Expect = 2.7
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 12/55 (21%)
Query: 63 NVTWWR--------VLHGNYT--WPPEFLGPGEDPNEPPP--RPFLDMGEGTKNR 105
+V WW V N+ PP+F G P +PPP P + G GT R
Sbjct: 303 DVGWWEGELNGRRGVFPDNFVKLLPPDFEKEGNRPKKPPPPSAPVIKQGAGTTER 357
>gi|229577039 butyrophilin-like 8 isoform 4 precursor [Homo
sapiens]
Length = 340
Score = 28.9 bits (63), Expect = 2.7
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 15 IFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNY 74
+ L +LS + LG G ++ P +V GEDA F C + NA R G +
Sbjct: 3 LMLSLVLSLLKLGSGQWQVFGPDKPVQALV--GEDAAFSCFLSPKTNAEAMEVRFFRGQF 60
Query: 75 TWPPEFLGPGEDPNEPPPRPFLDM 98
+ G+D +PF+ M
Sbjct: 61 SSVVHLYRDGKD------QPFMQM 78
>gi|94957742 butyrophilin-like 8 isoform 2 precursor [Homo
sapiens]
Length = 500
Score = 28.9 bits (63), Expect = 2.7
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 15 IFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNY 74
+ L +LS + LG G ++ P +V GEDA F C + NA R G +
Sbjct: 3 LMLSLVLSLLKLGSGQWQVFGPDKPVQALV--GEDAAFSCFLSPKTNAEAMEVRFFRGQF 60
Query: 75 TWPPEFLGPGEDPNEPPPRPFLDM 98
+ G+D +PF+ M
Sbjct: 61 SSVVHLYRDGKD------QPFMQM 78
>gi|13376271 butyrophilin-like 8 isoform 1 precursor [Homo
sapiens]
Length = 347
Score = 28.9 bits (63), Expect = 2.7
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 15 IFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNY 74
+ L +LS + LG G ++ P +V GEDA F C + NA R G +
Sbjct: 3 LMLSLVLSLLKLGSGQWQVFGPDKPVQALV--GEDAAFSCFLSPKTNAEAMEVRFFRGQF 60
Query: 75 TWPPEFLGPGEDPNEPPPRPFLDM 98
+ G+D +PF+ M
Sbjct: 61 SSVVHLYRDGKD------QPFMQM 78
>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
sapiens]
Length = 1954
Score = 28.9 bits (63), Expect = 2.7
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Query: 68 RVLHGNYTWPPE-----FLGPGEDPNEPPPRP 94
R+LH +T PP GP +P+ PPP+P
Sbjct: 471 RILHWRWTEPPAPFMVGLPGPDVEPSLPPPKP 502
>gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens]
Length = 1083
Score = 28.5 bits (62), Expect = 3.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 11/60 (18%)
Query: 139 DAGDEYEDENLYE---------GLNLDDCSMYEDIS--RGLQGTYQDVGSLNIGDVQLEK 187
D DEYEDE+ +E N+D+ + ED S R LQ ++D +G+ ++K
Sbjct: 81 DVDDEYEDEDQWEDGAEDILEKASNIDNVVLDEDRSGARRLQNLWRDQREEELGEYYMKK 140
>gi|145275174 kin of IRRE-like 2 isoform c [Homo sapiens]
Length = 708
Score = 28.5 bits (62), Expect = 3.6
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 24 VYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWR 68
V GP QA P + V +GEDA F C + VTW R
Sbjct: 308 VLFGPILQAK-----PEPVSVDVGEDASFSCAWRGNPLPRVTWTR 347
>gi|145275172 kin of IRRE-like 2 isoform b [Homo sapiens]
Length = 583
Score = 28.5 bits (62), Expect = 3.6
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 24 VYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWR 68
V GP QA P + V +GEDA F C + VTW R
Sbjct: 258 VLFGPILQAK-----PEPVSVDVGEDASFSCAWRGNPLPRVTWTR 297
>gi|145275170 kin of IRRE-like 2 isoform a [Homo sapiens]
Length = 633
Score = 28.5 bits (62), Expect = 3.6
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 24 VYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWR 68
V GP QA P + V +GEDA F C + VTW R
Sbjct: 308 VLFGPILQAK-----PEPVSVDVGEDASFSCAWRGNPLPRVTWTR 347
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 28.1 bits (61), Expect = 4.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 71 HGNYTWPPEFLGPGEDPNEPPPRPFLD 97
H TWPP GP + P E P P ++
Sbjct: 441 HPQQTWPPVNEGPPKPPTELEPEPEIE 467
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 28.1 bits (61), Expect = 4.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 71 HGNYTWPPEFLGPGEDPNEPPPRPFLD 97
H TWPP GP + P E P P ++
Sbjct: 441 HPQQTWPPVNEGPPKPPTELEPEPEIE 467
>gi|229089140 leucine rich repeat containing 24 [Homo sapiens]
Length = 513
Score = 28.1 bits (61), Expect = 4.7
Identities = 18/63 (28%), Positives = 26/63 (41%)
Query: 7 VLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTW 66
++ A P + L LL + C +H P L +LGED C + VTW
Sbjct: 234 IMCAEPPRLALQSLLDVSHSSLICIPPSVHVQPLELTANLGEDLRVACQASGYPQPLVTW 293
Query: 67 WRV 69
+V
Sbjct: 294 RKV 296
>gi|214830451 sequestosome 1 isoform 2 [Homo sapiens]
Length = 356
Score = 27.7 bits (60), Expect = 6.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 56 HNSSNNANVTWWR-VLHGNYTWPPEFLGPGEDPNEPPPR 93
H S ++ W R V HG++ WP +GP + + PPR
Sbjct: 90 HLSEGFSHSRWLRKVKHGHFGWPGWEMGPPGNWSPRPPR 128
>gi|214830438 sequestosome 1 isoform 2 [Homo sapiens]
Length = 356
Score = 27.7 bits (60), Expect = 6.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 56 HNSSNNANVTWWR-VLHGNYTWPPEFLGPGEDPNEPPPR 93
H S ++ W R V HG++ WP +GP + + PPR
Sbjct: 90 HLSEGFSHSRWLRKVKHGHFGWPGWEMGPPGNWSPRPPR 128
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.141 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,271,208
Number of Sequences: 37866
Number of extensions: 473046
Number of successful extensions: 1479
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1455
Number of HSP's gapped (non-prelim): 42
length of query: 188
length of database: 18,247,518
effective HSP length: 96
effective length of query: 92
effective length of database: 14,612,382
effective search space: 1344339144
effective search space used: 1344339144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.