Guide to the Human Genome
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Name: CD79A Sequence: fasta or formatted (226aa) NCBI GI: 4502685
Description:

CD79A antigen isoform 1 precursor

Referenced in:

B cells

Other entries for this name:
alt prot [188aa] CD79A antigen isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         10           1
 C cysteine            2.7          6           1
 D aspartate           4.9         11           2
 E glutamate           6.2         14           1
 F phenylalanine       3.1          7           1
 G glycine            11.1         25           2
 H histidine           2.2          5           1
 I isoleucine          4.4         10           2
 K lysine              2.7          6           1
 L leucine            12.4         28           3
 M methionine          2.2          5           1
 N asparagine          6.2         14           2
 P proline             7.1         16           3
 Q glutamine           5.3         12           2
 R arginine            4.0          9           1
 S serine              4.9         11           2
 T threonine           4.0          9           1
 V valine              6.2         14           2
 W tryptophan          2.2          5           2
 Y tyrosine            4.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD79A antigen isoform 1 precursor 
CD79A                 0.784   CD79A antigen isoform 2 precursor 
CD79B                 0.070   CD79B antigen isoform 3 precursor 
CD79B                 0.070   CD79B antigen isoform 1 precursor 
NCR3                  0.037   natural cytotoxicity triggering receptor 3 isoform ...
NCR3                  0.035   natural cytotoxicity triggering receptor 3 isoform a...
PRTG                  0.033   protogenin 
NCR3                  0.033   natural cytotoxicity triggering receptor 3 isoform ...
CNTN3                 0.033   contactin 3 
ROBO1                 0.031   roundabout 1 isoform d 
ROBO1                 0.031   roundabout 1 isoform c 
ROBO1                 0.031   roundabout 1 isoform b 
LOC642132             0.031   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.031   PREDICTED: similar to roundabout 1 isoform 2 
ROBO1                 0.031   roundabout 1 isoform a 
TTN                   0.031   titin isoform N2-A 
CNTN4                 0.031   contactin 4 isoform c precursor 
CNTN4                 0.031   contactin 4 isoform a precursor 
KIRREL2               0.029   kin of IRRE-like 2 isoform c 
KIRREL2               0.029   kin of IRRE-like 2 isoform b 
KIRREL2               0.029   kin of IRRE-like 2 isoform a 
FLT1                  0.026   fms-related tyrosine kinase 1 isoform 1 precursor [...
ROBO2                 0.026   roundabout, axon guidance receptor, homolog 2 isofo...
ROBO2                 0.026   roundabout, axon guidance receptor, homolog 2 isofor...
KIRREL3               0.024   kin of IRRE like 3 isoform 2 
KIRREL3               0.024   kin of IRRE like 3 isoform 1 
ASAM                  0.024   adipocyte-specific adhesion molecule 
OBSL1                 0.022   obscurin-like 1 
AMICA1                0.022   adhesion molecule, interacts with CXADR antigen 1 i...
AMICA1                0.022   adhesion molecule, interacts with CXADR antigen 1 i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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