Guide to the Human Genome
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Name: CD79A Sequence: fasta or formatted (188aa) NCBI GI: 11038672
Description:

CD79A antigen isoform 2 precursor

Referenced in:

B cells

Other entries for this name:
alt prot [226aa] CD79A antigen isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         10           1
 C cysteine            2.1          4           1
 D aspartate           5.9         11           2
 E glutamate           6.9         13           1
 F phenylalanine       3.7          7           1
 G glycine            10.6         20           2
 H histidine           2.1          4           1
 I isoleucine          3.7          7           2
 K lysine              2.7          5           1
 L leucine            13.8         26           3
 M methionine          2.7          5           1
 N asparagine          5.9         11           2
 P proline             8.5         16           3
 Q glutamine           3.7          7           1
 R arginine            3.2          6           1
 S serine              4.3          8           2
 T threonine           3.7          7           1
 V valine              5.3         10           2
 W tryptophan          2.7          5           2
 Y tyrosine            3.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD79A antigen isoform 2 precursor 
CD79A                 0.947   CD79A antigen isoform 1 precursor 
CD79B                 0.024   CD79B antigen isoform 3 precursor 
CD79B                 0.024   CD79B antigen isoform 2 precursor 
CD79B                 0.024   CD79B antigen isoform 1 precursor 
MTF1                  0.024   metal-regulatory transcription factor 1 
KIRREL3               0.016   kin of IRRE like 3 isoform 2 
KIRREL3               0.016   kin of IRRE like 3 isoform 1 
NCR3                  0.016   natural cytotoxicity triggering receptor 3 isoform ...
NCR3                  0.016   natural cytotoxicity triggering receptor 3 isoform a...
NCR3                  0.016   natural cytotoxicity triggering receptor 3 isoform ...
FIP1L1                0.016   FIP1 like 1 isoform 3 
FIP1L1                0.016   FIP1 like 1 isoform 2 
FIP1L1                0.016   FIP1 like 1 isoform 1 
ACVR2A                0.013   activin A receptor, type IIA precursor 
SH3KBP1               0.011   SH3-domain kinase binding protein 1 isoform b 
SH3KBP1               0.011   SH3-domain kinase binding protein 1 isoform a 
BTNL8                 0.011   butyrophilin-like 8 isoform 4 precursor 
BTNL8                 0.011   butyrophilin-like 8 isoform 2 precursor 
BTNL8                 0.011   butyrophilin-like 8 isoform 1 precursor 
CHD5                  0.011   chromodomain helicase DNA binding protein 5 
SUPT5H                0.008   suppressor of Ty 5 homolog isoform b 
KIRREL2               0.008   kin of IRRE-like 2 isoform c 
KIRREL2               0.008   kin of IRRE-like 2 isoform b 
KIRREL2               0.008   kin of IRRE-like 2 isoform a 
PPP1R13L              0.008   protein phosphatase 1, regulatory subunit 13 like [...
PPP1R13L              0.008   protein phosphatase 1, regulatory subunit 13 like [H...
LRRC24                0.008   leucine rich repeat containing 24 
SQSTM1                0.008   sequestosome 1 isoform 2 
SQSTM1                0.008   sequestosome 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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