Guide to the Human Genome
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Name: BTNL8 Sequence: fasta or formatted (500aa) NCBI GI: 94957742
Description:

butyrophilin-like 8 isoform 2 precursor

Referenced in:

Butyrophilin Family

Other entries for this name:
alt prot [347aa] butyrophilin-like 8 isoform 1 precursor
alt prot [384aa] butyrophilin-like 8 isoform 3 precursor
alt prot [340aa] butyrophilin-like 8 isoform 4 precursor
alt prot [375aa] butyrophilin-like 8 isoform 5
alt prot [316aa] butyrophilin-like 8 isoform 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         26           2
 C cysteine            2.2         11           2
 D aspartate           4.8         24           2
 E glutamate           6.0         30           1
 F phenylalanine       5.2         26           2
 G glycine             6.8         34           2
 H histidine           2.8         14           1
 I isoleucine          5.0         25           1
 K lysine              5.0         25           1
 L leucine             9.0         45           2
 M methionine          1.6          8           1
 N asparagine          2.4         12           1
 P proline             5.2         26           2
 Q glutamine           5.6         28           1
 R arginine            6.6         33           2
 S serine              9.0         45           3
 T threonine           5.4         27           2
 V valine              7.0         35           2
 W tryptophan          2.2         11           1
 Y tyrosine            3.0         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   butyrophilin-like 8 isoform 2 precursor 
BTNL8                 0.743   butyrophilin-like 8 isoform 5 
BTNL8                 0.742   butyrophilin-like 8 isoform 3 precursor 
BTNL3                 0.661   butyrophilin-like 3 
BTNL8                 0.633   butyrophilin-like 8 isoform 6 
BTNL8                 0.505   butyrophilin-like 8 isoform 4 precursor 
BTNL8                 0.505   butyrophilin-like 8 isoform 1 precursor 
BTNL9                 0.301   butyrophilin-like 9 
BTN1A1                0.268   butyrophilin, subfamily 1, member A1 
BTN3A3                0.248   butyrophilin, subfamily 3, member A3 isoform a 
BTN3A1                0.243   butyrophilin, subfamily 3, member A1 isoform a [Homo...
BTN2A2                0.240   butyrophilin, subfamily 2, member A2 isoform a 
BTN2A1                0.238   butyrophilin, subfamily 2, member A1 isoform 1 precur...
BTN3A3                0.233   butyrophilin, subfamily 3, member A3 isoform b [Homo...
BTN3A1                0.184   butyrophilin, subfamily 3, member A1 isoform c [Hom...
BTN3A1                0.144   butyrophilin, subfamily 3, member A1 isoform b [Homo...
BTN3A1                0.144   butyrophilin, subfamily 3, member A1 isoform d [Hom...
BTN2A1                0.140   butyrophilin, subfamily 2, member A1 isoform 2 precu...
BTN2A2                0.140   butyrophilin, subfamily 2, member A2 isoform b [Homo...
BTN3A2                0.137   butyrophilin, subfamily 3, member A2 precursor [Homo...
BTNL2                 0.126   butyrophilin-like 2 
ERMAP                 0.121   erythroblast membrane-associated protein precursor [...
ERMAP                 0.121   erythroblast membrane-associated protein precursor [...
TRIM27                0.112   ret finger protein 
TRIM39                0.110   tripartite motif-containing 39 isoform 2 
TRIM39                0.110   tripartite motif-containing 39 isoform 1 
TRIM58                0.109   tripartite motif-containing 58 
TRIM21                0.107   tripartite motif protein 21 
MEFV                  0.101   Mediterranean fever protein 
TRIM68                0.100   ring finger protein 137 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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