Guide to the Human Genome
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Name: NCR3 Sequence: fasta or formatted (190aa) NCBI GI: 224586865
Description:

natural cytotoxicity triggering receptor 3 isoform c

Referenced in:

Additional Immunoglobulin-related Receptors

Other entries for this name:
alt prot [177aa] natural cytotoxicity triggering receptor 3 isoform b
alt prot [201aa] natural cytotoxicity triggering receptor 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         13           1
 C cysteine            3.7          7           1
 D aspartate           2.6          5           1
 E glutamate           5.3         10           1
 F phenylalanine       3.7          7           1
 G glycine            11.1         21           1
 H histidine           5.3         10           1
 I isoleucine          3.7          7           1
 K lysine              1.6          3           1
 L leucine            10.5         20           3
 M methionine          2.1          4           1
 N asparagine          1.6          3           1
 P proline             6.3         12           2
 Q glutamine           2.6          5           1
 R arginine            7.4         14           1
 S serine              7.9         15           2
 T threonine           4.2          8           1
 V valine             10.0         19           2
 W tryptophan          1.6          3           1
 Y tyrosine            2.1          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   natural cytotoxicity triggering receptor 3 isoform ... 
NCR3                  0.841   natural cytotoxicity triggering receptor 3 isoform a...
NCR3                  0.833   natural cytotoxicity triggering receptor 3 isoform ...
CTLA4                 0.046   cytotoxic T-lymphocyte-associated protein 4 isoform ...
CD79A                 0.040   CD79A antigen isoform 1 precursor 
HMCN2                 0.040   PREDICTED: hemicentin 2 
HMCN2                 0.040   PREDICTED: hemicentin 2 
HMCN2                 0.040   PREDICTED: hemicentin 2 
PVRL4                 0.038   poliovirus receptor-related 4 
CTLA4                 0.038   cytotoxic T-lymphocyte-associated protein 4 isoform ...
KIRREL2               0.032   kin of IRRE-like 2 isoform c 
KIRREL2               0.032   kin of IRRE-like 2 isoform a 
CD22                  0.024   CD22 molecule 
HAPLN3                0.024   hyaluronan and proteoglycan link protein 3 
BCAM                  0.022   basal cell adhesion molecule isoform 2 precursor [Ho...
BCAM                  0.022   basal cell adhesion molecule isoform 1 precursor [Ho...
SIGLEC1               0.022   sialoadhesin precursor 
SIGLEC9               0.022   sialic acid binding Ig-like lectin 9 
SIGLEC15              0.019   sialic acid binding Ig-like lectin 15 
MPZL1                 0.019   myelin protein zero-like 1 isoform a 
PVRL1                 0.019   poliovirus receptor-related 1 isoform 2 
SCN2B                 0.016   sodium channel, voltage-gated, type II, beta 
PVRL2                 0.016   poliovirus receptor related 2 isoform alpha precursor...
PVRL2                 0.016   poliovirus receptor related 2 isoform delta precurs...
CD79A                 0.016   CD79A antigen isoform 2 precursor 
MPZL1                 0.013   myelin protein zero-like 1 isoform b 
VSTM2B                0.013   V-set and transmembrane domain containing 2B 
VSTM2B                0.013   PREDICTED: V-set and transmembrane domain containin...
VSTM2B                0.013   PREDICTED: V-set and transmembrane domain containin...
VSTM2B                0.013   PREDICTED: V-set and transmembrane domain containin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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