RPRD1B 613

Name: RPRD1B	Sequence: fasta or formatted (326aa)		NCBI GI: 11034845
Description: Regulation of nuclear pre-mRNA domain containing 1B		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 24 2 C cysteine 0.6 2 1 D aspartate 5.5 18 3 E glutamate 10.7 35 3 F phenylalanine 2.5 8 1 G glycine 3.7 12 2 H histidine 1.8 6 2 I isoleucine 3.1 10 1 K lysine 8.9 29 2 L leucine 13.5 44 3 M methionine 0.9 3 1 N asparagine 2.8 9 1 P proline 4.6 15 3 Q glutamine 6.4 21 2 R arginine 5.5 18 2 S serine 9.8 32 2 T threonine 4.0 13 1 V valine 5.2 17 1 W tryptophan 0.9 3 1 Y tyrosine 2.1 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Regulation of nuclear pre-mRNA domain containing 1B ... RPRD1A 0.634 regulation of nuclear pre-mRNA domain containing 1A ... RPRD2 0.136 Regulation of nuclear pre-mRNA domain containing 2 ... AKAP9 0.036 A-kinase anchor protein 9 isoform 2 AKAP9 0.036 A-kinase anchor protein 9 isoform 3 PCF11 0.034 pre-mRNA cleavage complex II protein Pcf11 CEP110 0.034 centrosomal protein 110kDa CENPF 0.033 centromere protein F GOLGB1 0.030 golgi autoantigen, golgin subfamily b, macrogolgin ... SMC1B 0.028 SMC1 structural maintenance of chromosomes 1-like 2 ... RBM16 0.028 RNA-binding motif protein 16 INCENP 0.028 inner centromere protein antigens 135/155kDa isofor... PPFIA3 0.028 PTPRF interacting protein alpha 3 GCC1 0.028 Golgi coiled-coil protein 1 CLIP1 0.026 restin isoform b CLIP1 0.026 restin isoform a CGNL1 0.026 cingulin-like 1 CLIP2 0.025 CAP-GLY domain containing linker protein 2 isoform ... MYH8 0.025 myosin, heavy chain 8, skeletal muscle, perinatal [... LRRC45 0.025 leucine rich repeat containing 45 TPM4 0.025 tropomyosin 4 isoform 1 MYO18A 0.025 myosin 18A isoform b MYO18A 0.025 myosin 18A isoform a INCENP 0.025 inner centromere protein antigens 135/155kDa isofor... RAD50 0.023 RAD50 homolog isoform 2 RAD50 0.023 RAD50 homolog isoform 1 MCC 0.023 mutated in colorectal cancers isoform 1 CDC42BPA 0.023 CDC42-binding protein kinase alpha isoform B TPM3 0.023 tropomyosin 3 isoform 1 GOLGA8B 0.023 golgi autoantigen, golgin subfamily a, 8B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.