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Search of human proteins with 156151441
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156151441 alpha-kinase 1 [Homo sapiens]
(1244 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156151443 alpha-kinase 1 [Homo sapiens] 2524 0.0
gi|156151441 alpha-kinase 1 [Homo sapiens] 2524 0.0
gi|9558749 elongation factor-2 kinase [Homo sapiens] 74 9e-13
gi|18921093 transient receptor potential cation channel, subfami... 54 9e-07
gi|148612863 transient receptor potential cation channel, subfam... 54 9e-07
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 35 0.58
gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens] 35 0.58
gi|123701326 zinc finger protein 831 [Homo sapiens] 35 0.58
gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens] 35 0.58
gi|47059492 hypothetical protein LOC80111 [Homo sapiens] 35 0.58
gi|7657138 golgi integral membrane protein 4 [Homo sapiens] 33 1.7
gi|39930383 BarH-like homeobox 2 [Homo sapiens] 33 1.7
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 33 2.2
gi|116875765 tight junction protein 1 isoform b [Homo sapiens] 32 2.9
gi|116875767 tight junction protein 1 isoform a [Homo sapiens] 32 2.9
gi|4758668 serine palmitoyltransferase, long chain base subunit ... 32 2.9
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 32 2.9
gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens] 32 2.9
gi|70980547 FYVE-finger-containing Rab5 effector protein rabenos... 32 2.9
gi|57529131 AVL9 homolog (S. cerevisiase) [Homo sapiens] 32 3.8
gi|161016767 mucin 21 [Homo sapiens] 32 3.8
gi|24415404 MDN1, midasin homolog [Homo sapiens] 32 3.8
gi|130484306 retinoic acid early transcript 1G [Homo sapiens] 32 4.9
gi|28558977 mediator complex subunit 26 [Homo sapiens] 32 4.9
gi|14149807 coiled-coil domain containing 55 isoform 1 [Homo sap... 32 4.9
gi|126723295 retinoic acid early transcript 1L [Homo sapiens] 32 4.9
gi|122056617 LIM domain binding 3 isoform 3 [Homo sapiens] 31 6.4
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 31 6.4
gi|38201677 teashirt family zinc finger 1 [Homo sapiens] 31 6.4
gi|4507887 vascular endothelial growth factor B [Homo sapiens] 31 6.4
>gi|156151443 alpha-kinase 1 [Homo sapiens]
Length = 1244
Score = 2524 bits (6541), Expect = 0.0
Identities = 1244/1244 (100%), Positives = 1244/1244 (100%)
Query: 1 MNNQKVVAVLLQECKQVLDQLLLEAPDVSEEDKSEDQRCRALLPSELRTLIQEAKEMKWP 60
MNNQKVVAVLLQECKQVLDQLLLEAPDVSEEDKSEDQRCRALLPSELRTLIQEAKEMKWP
Sbjct: 1 MNNQKVVAVLLQECKQVLDQLLLEAPDVSEEDKSEDQRCRALLPSELRTLIQEAKEMKWP 60
Query: 61 FVPEKWQYKQAVGPEDKTNLKDVIGAGLQQLLASLRASILARDCAAAAAIVFLVDRFLYG 120
FVPEKWQYKQAVGPEDKTNLKDVIGAGLQQLLASLRASILARDCAAAAAIVFLVDRFLYG
Sbjct: 61 FVPEKWQYKQAVGPEDKTNLKDVIGAGLQQLLASLRASILARDCAAAAAIVFLVDRFLYG 120
Query: 121 LDVSGKLLQVAKGLHKLQPATPIAPQVVIRQARISVNSGKLLKAEYILSSLISNNGATGT 180
LDVSGKLLQVAKGLHKLQPATPIAPQVVIRQARISVNSGKLLKAEYILSSLISNNGATGT
Sbjct: 121 LDVSGKLLQVAKGLHKLQPATPIAPQVVIRQARISVNSGKLLKAEYILSSLISNNGATGT 180
Query: 181 WLYRNESDKVLVQSVCIQIRGQILQKLGMWYEAAELIWASIVGYLALPQPDKKGLSTSLG 240
WLYRNESDKVLVQSVCIQIRGQILQKLGMWYEAAELIWASIVGYLALPQPDKKGLSTSLG
Sbjct: 181 WLYRNESDKVLVQSVCIQIRGQILQKLGMWYEAAELIWASIVGYLALPQPDKKGLSTSLG 240
Query: 241 ILADIFVSMSKNDYEKFKNNPQINLSLLKEFDHHLLSAAEACKLAAAFSAYTPLFVLTAV 300
ILADIFVSMSKNDYEKFKNNPQINLSLLKEFDHHLLSAAEACKLAAAFSAYTPLFVLTAV
Sbjct: 241 ILADIFVSMSKNDYEKFKNNPQINLSLLKEFDHHLLSAAEACKLAAAFSAYTPLFVLTAV 300
Query: 301 NIRGTCLLSYSSSNDCPPELKNLHLCEAKEAFEIGLLTKRDDEPVTGKQELHSFVKAAFG 360
NIRGTCLLSYSSSNDCPPELKNLHLCEAKEAFEIGLLTKRDDEPVTGKQELHSFVKAAFG
Sbjct: 301 NIRGTCLLSYSSSNDCPPELKNLHLCEAKEAFEIGLLTKRDDEPVTGKQELHSFVKAAFG 360
Query: 361 LTTVHRRLHGETGTVHAASQLCKEAMGKLYNFSTSSRSQDREALSQEVMSVIAQVKEHLQ 420
LTTVHRRLHGETGTVHAASQLCKEAMGKLYNFSTSSRSQDREALSQEVMSVIAQVKEHLQ
Sbjct: 361 LTTVHRRLHGETGTVHAASQLCKEAMGKLYNFSTSSRSQDREALSQEVMSVIAQVKEHLQ 420
Query: 421 VQSFSNVDDRSYVPESFECRLDKLILHGQGDFQKILDTYSQHHTSVCEVFESDCGNNKNE 480
VQSFSNVDDRSYVPESFECRLDKLILHGQGDFQKILDTYSQHHTSVCEVFESDCGNNKNE
Sbjct: 421 VQSFSNVDDRSYVPESFECRLDKLILHGQGDFQKILDTYSQHHTSVCEVFESDCGNNKNE 480
Query: 481 QKDAKTGVCITALKTEIKNIDTVSTTQEKPHCQRDTGISSSLMGKNVQRELRRGGRRNWT 540
QKDAKTGVCITALKTEIKNIDTVSTTQEKPHCQRDTGISSSLMGKNVQRELRRGGRRNWT
Sbjct: 481 QKDAKTGVCITALKTEIKNIDTVSTTQEKPHCQRDTGISSSLMGKNVQRELRRGGRRNWT 540
Query: 541 HSDAFRVSLDQDVETETEPSDYSNGEGAVFNKSLSGSQTSSAWSNLSGFSSSASWEEVNY 600
HSDAFRVSLDQDVETETEPSDYSNGEGAVFNKSLSGSQTSSAWSNLSGFSSSASWEEVNY
Sbjct: 541 HSDAFRVSLDQDVETETEPSDYSNGEGAVFNKSLSGSQTSSAWSNLSGFSSSASWEEVNY 600
Query: 601 HVDDRSARKEPGKEHLVDTQCSTALSEELENDREGRAMHSLHSQLHDLSLQEPNNDNLEP 660
HVDDRSARKEPGKEHLVDTQCSTALSEELENDREGRAMHSLHSQLHDLSLQEPNNDNLEP
Sbjct: 601 HVDDRSARKEPGKEHLVDTQCSTALSEELENDREGRAMHSLHSQLHDLSLQEPNNDNLEP 660
Query: 661 SQNQPQQQMPLTPFSPHNTPGIFLAPGAGLLEGAPEGIQEVRNMGPRNTSAHSRPSYRSA 720
SQNQPQQQMPLTPFSPHNTPGIFLAPGAGLLEGAPEGIQEVRNMGPRNTSAHSRPSYRSA
Sbjct: 661 SQNQPQQQMPLTPFSPHNTPGIFLAPGAGLLEGAPEGIQEVRNMGPRNTSAHSRPSYRSA 720
Query: 721 SWSSDSGRPKNMGTHPSVQKEEAFEIIVEFPETNCDVKDRQGKEQGEEISERGAGPTFKA 780
SWSSDSGRPKNMGTHPSVQKEEAFEIIVEFPETNCDVKDRQGKEQGEEISERGAGPTFKA
Sbjct: 721 SWSSDSGRPKNMGTHPSVQKEEAFEIIVEFPETNCDVKDRQGKEQGEEISERGAGPTFKA 780
Query: 781 SPSWVDPEGETAESTEDAPLDFHRVLHNSLGNISMLPCSSFTPNWPVQNPDSRKSGGPVA 840
SPSWVDPEGETAESTEDAPLDFHRVLHNSLGNISMLPCSSFTPNWPVQNPDSRKSGGPVA
Sbjct: 781 SPSWVDPEGETAESTEDAPLDFHRVLHNSLGNISMLPCSSFTPNWPVQNPDSRKSGGPVA 840
Query: 841 EQGIDPDASTVDEEGQLLDSMDVPCTNGHGSHRLCILRQPPGQRAETPNSSVSGNILFPV 900
EQGIDPDASTVDEEGQLLDSMDVPCTNGHGSHRLCILRQPPGQRAETPNSSVSGNILFPV
Sbjct: 841 EQGIDPDASTVDEEGQLLDSMDVPCTNGHGSHRLCILRQPPGQRAETPNSSVSGNILFPV 900
Query: 901 LSEDCTTTEEGNQPGNMLNCSQNSSSSSVWWLKSPAFSSGSSEGDSPWSYLNSSGSSWVS 960
LSEDCTTTEEGNQPGNMLNCSQNSSSSSVWWLKSPAFSSGSSEGDSPWSYLNSSGSSWVS
Sbjct: 901 LSEDCTTTEEGNQPGNMLNCSQNSSSSSVWWLKSPAFSSGSSEGDSPWSYLNSSGSSWVS 960
Query: 961 LPGKMRKEILEARTLQPDDFEKLLAGVRHDWLFQRLENTGVFKPSQLHRAHSALLLKYSK 1020
LPGKMRKEILEARTLQPDDFEKLLAGVRHDWLFQRLENTGVFKPSQLHRAHSALLLKYSK
Sbjct: 961 LPGKMRKEILEARTLQPDDFEKLLAGVRHDWLFQRLENTGVFKPSQLHRAHSALLLKYSK 1020
Query: 1021 KSELWTAQETIVYLGDYLTVKKKGRQRNAFWVHHLHQEEILGRYVGKDYKEQKGLWHHFT 1080
KSELWTAQETIVYLGDYLTVKKKGRQRNAFWVHHLHQEEILGRYVGKDYKEQKGLWHHFT
Sbjct: 1021 KSELWTAQETIVYLGDYLTVKKKGRQRNAFWVHHLHQEEILGRYVGKDYKEQKGLWHHFT 1080
Query: 1081 DVERQMTAQHYVTEFNKRLYEQNIPTQIFYIPSTILLILEDKTIKGCISVEPYILGEFVK 1140
DVERQMTAQHYVTEFNKRLYEQNIPTQIFYIPSTILLILEDKTIKGCISVEPYILGEFVK
Sbjct: 1081 DVERQMTAQHYVTEFNKRLYEQNIPTQIFYIPSTILLILEDKTIKGCISVEPYILGEFVK 1140
Query: 1141 LSNNTKVVKTEYKATEYGLAYGHFSYEFSNHRDVVVDLQGWVTGNGKGLIYLTDPQIHSV 1200
LSNNTKVVKTEYKATEYGLAYGHFSYEFSNHRDVVVDLQGWVTGNGKGLIYLTDPQIHSV
Sbjct: 1141 LSNNTKVVKTEYKATEYGLAYGHFSYEFSNHRDVVVDLQGWVTGNGKGLIYLTDPQIHSV 1200
Query: 1201 DQKVFTTNFGKRGIFYFFNNQHVECNEICHRLSLTRPSMEKPCT 1244
DQKVFTTNFGKRGIFYFFNNQHVECNEICHRLSLTRPSMEKPCT
Sbjct: 1201 DQKVFTTNFGKRGIFYFFNNQHVECNEICHRLSLTRPSMEKPCT 1244
>gi|156151441 alpha-kinase 1 [Homo sapiens]
Length = 1244
Score = 2524 bits (6541), Expect = 0.0
Identities = 1244/1244 (100%), Positives = 1244/1244 (100%)
Query: 1 MNNQKVVAVLLQECKQVLDQLLLEAPDVSEEDKSEDQRCRALLPSELRTLIQEAKEMKWP 60
MNNQKVVAVLLQECKQVLDQLLLEAPDVSEEDKSEDQRCRALLPSELRTLIQEAKEMKWP
Sbjct: 1 MNNQKVVAVLLQECKQVLDQLLLEAPDVSEEDKSEDQRCRALLPSELRTLIQEAKEMKWP 60
Query: 61 FVPEKWQYKQAVGPEDKTNLKDVIGAGLQQLLASLRASILARDCAAAAAIVFLVDRFLYG 120
FVPEKWQYKQAVGPEDKTNLKDVIGAGLQQLLASLRASILARDCAAAAAIVFLVDRFLYG
Sbjct: 61 FVPEKWQYKQAVGPEDKTNLKDVIGAGLQQLLASLRASILARDCAAAAAIVFLVDRFLYG 120
Query: 121 LDVSGKLLQVAKGLHKLQPATPIAPQVVIRQARISVNSGKLLKAEYILSSLISNNGATGT 180
LDVSGKLLQVAKGLHKLQPATPIAPQVVIRQARISVNSGKLLKAEYILSSLISNNGATGT
Sbjct: 121 LDVSGKLLQVAKGLHKLQPATPIAPQVVIRQARISVNSGKLLKAEYILSSLISNNGATGT 180
Query: 181 WLYRNESDKVLVQSVCIQIRGQILQKLGMWYEAAELIWASIVGYLALPQPDKKGLSTSLG 240
WLYRNESDKVLVQSVCIQIRGQILQKLGMWYEAAELIWASIVGYLALPQPDKKGLSTSLG
Sbjct: 181 WLYRNESDKVLVQSVCIQIRGQILQKLGMWYEAAELIWASIVGYLALPQPDKKGLSTSLG 240
Query: 241 ILADIFVSMSKNDYEKFKNNPQINLSLLKEFDHHLLSAAEACKLAAAFSAYTPLFVLTAV 300
ILADIFVSMSKNDYEKFKNNPQINLSLLKEFDHHLLSAAEACKLAAAFSAYTPLFVLTAV
Sbjct: 241 ILADIFVSMSKNDYEKFKNNPQINLSLLKEFDHHLLSAAEACKLAAAFSAYTPLFVLTAV 300
Query: 301 NIRGTCLLSYSSSNDCPPELKNLHLCEAKEAFEIGLLTKRDDEPVTGKQELHSFVKAAFG 360
NIRGTCLLSYSSSNDCPPELKNLHLCEAKEAFEIGLLTKRDDEPVTGKQELHSFVKAAFG
Sbjct: 301 NIRGTCLLSYSSSNDCPPELKNLHLCEAKEAFEIGLLTKRDDEPVTGKQELHSFVKAAFG 360
Query: 361 LTTVHRRLHGETGTVHAASQLCKEAMGKLYNFSTSSRSQDREALSQEVMSVIAQVKEHLQ 420
LTTVHRRLHGETGTVHAASQLCKEAMGKLYNFSTSSRSQDREALSQEVMSVIAQVKEHLQ
Sbjct: 361 LTTVHRRLHGETGTVHAASQLCKEAMGKLYNFSTSSRSQDREALSQEVMSVIAQVKEHLQ 420
Query: 421 VQSFSNVDDRSYVPESFECRLDKLILHGQGDFQKILDTYSQHHTSVCEVFESDCGNNKNE 480
VQSFSNVDDRSYVPESFECRLDKLILHGQGDFQKILDTYSQHHTSVCEVFESDCGNNKNE
Sbjct: 421 VQSFSNVDDRSYVPESFECRLDKLILHGQGDFQKILDTYSQHHTSVCEVFESDCGNNKNE 480
Query: 481 QKDAKTGVCITALKTEIKNIDTVSTTQEKPHCQRDTGISSSLMGKNVQRELRRGGRRNWT 540
QKDAKTGVCITALKTEIKNIDTVSTTQEKPHCQRDTGISSSLMGKNVQRELRRGGRRNWT
Sbjct: 481 QKDAKTGVCITALKTEIKNIDTVSTTQEKPHCQRDTGISSSLMGKNVQRELRRGGRRNWT 540
Query: 541 HSDAFRVSLDQDVETETEPSDYSNGEGAVFNKSLSGSQTSSAWSNLSGFSSSASWEEVNY 600
HSDAFRVSLDQDVETETEPSDYSNGEGAVFNKSLSGSQTSSAWSNLSGFSSSASWEEVNY
Sbjct: 541 HSDAFRVSLDQDVETETEPSDYSNGEGAVFNKSLSGSQTSSAWSNLSGFSSSASWEEVNY 600
Query: 601 HVDDRSARKEPGKEHLVDTQCSTALSEELENDREGRAMHSLHSQLHDLSLQEPNNDNLEP 660
HVDDRSARKEPGKEHLVDTQCSTALSEELENDREGRAMHSLHSQLHDLSLQEPNNDNLEP
Sbjct: 601 HVDDRSARKEPGKEHLVDTQCSTALSEELENDREGRAMHSLHSQLHDLSLQEPNNDNLEP 660
Query: 661 SQNQPQQQMPLTPFSPHNTPGIFLAPGAGLLEGAPEGIQEVRNMGPRNTSAHSRPSYRSA 720
SQNQPQQQMPLTPFSPHNTPGIFLAPGAGLLEGAPEGIQEVRNMGPRNTSAHSRPSYRSA
Sbjct: 661 SQNQPQQQMPLTPFSPHNTPGIFLAPGAGLLEGAPEGIQEVRNMGPRNTSAHSRPSYRSA 720
Query: 721 SWSSDSGRPKNMGTHPSVQKEEAFEIIVEFPETNCDVKDRQGKEQGEEISERGAGPTFKA 780
SWSSDSGRPKNMGTHPSVQKEEAFEIIVEFPETNCDVKDRQGKEQGEEISERGAGPTFKA
Sbjct: 721 SWSSDSGRPKNMGTHPSVQKEEAFEIIVEFPETNCDVKDRQGKEQGEEISERGAGPTFKA 780
Query: 781 SPSWVDPEGETAESTEDAPLDFHRVLHNSLGNISMLPCSSFTPNWPVQNPDSRKSGGPVA 840
SPSWVDPEGETAESTEDAPLDFHRVLHNSLGNISMLPCSSFTPNWPVQNPDSRKSGGPVA
Sbjct: 781 SPSWVDPEGETAESTEDAPLDFHRVLHNSLGNISMLPCSSFTPNWPVQNPDSRKSGGPVA 840
Query: 841 EQGIDPDASTVDEEGQLLDSMDVPCTNGHGSHRLCILRQPPGQRAETPNSSVSGNILFPV 900
EQGIDPDASTVDEEGQLLDSMDVPCTNGHGSHRLCILRQPPGQRAETPNSSVSGNILFPV
Sbjct: 841 EQGIDPDASTVDEEGQLLDSMDVPCTNGHGSHRLCILRQPPGQRAETPNSSVSGNILFPV 900
Query: 901 LSEDCTTTEEGNQPGNMLNCSQNSSSSSVWWLKSPAFSSGSSEGDSPWSYLNSSGSSWVS 960
LSEDCTTTEEGNQPGNMLNCSQNSSSSSVWWLKSPAFSSGSSEGDSPWSYLNSSGSSWVS
Sbjct: 901 LSEDCTTTEEGNQPGNMLNCSQNSSSSSVWWLKSPAFSSGSSEGDSPWSYLNSSGSSWVS 960
Query: 961 LPGKMRKEILEARTLQPDDFEKLLAGVRHDWLFQRLENTGVFKPSQLHRAHSALLLKYSK 1020
LPGKMRKEILEARTLQPDDFEKLLAGVRHDWLFQRLENTGVFKPSQLHRAHSALLLKYSK
Sbjct: 961 LPGKMRKEILEARTLQPDDFEKLLAGVRHDWLFQRLENTGVFKPSQLHRAHSALLLKYSK 1020
Query: 1021 KSELWTAQETIVYLGDYLTVKKKGRQRNAFWVHHLHQEEILGRYVGKDYKEQKGLWHHFT 1080
KSELWTAQETIVYLGDYLTVKKKGRQRNAFWVHHLHQEEILGRYVGKDYKEQKGLWHHFT
Sbjct: 1021 KSELWTAQETIVYLGDYLTVKKKGRQRNAFWVHHLHQEEILGRYVGKDYKEQKGLWHHFT 1080
Query: 1081 DVERQMTAQHYVTEFNKRLYEQNIPTQIFYIPSTILLILEDKTIKGCISVEPYILGEFVK 1140
DVERQMTAQHYVTEFNKRLYEQNIPTQIFYIPSTILLILEDKTIKGCISVEPYILGEFVK
Sbjct: 1081 DVERQMTAQHYVTEFNKRLYEQNIPTQIFYIPSTILLILEDKTIKGCISVEPYILGEFVK 1140
Query: 1141 LSNNTKVVKTEYKATEYGLAYGHFSYEFSNHRDVVVDLQGWVTGNGKGLIYLTDPQIHSV 1200
LSNNTKVVKTEYKATEYGLAYGHFSYEFSNHRDVVVDLQGWVTGNGKGLIYLTDPQIHSV
Sbjct: 1141 LSNNTKVVKTEYKATEYGLAYGHFSYEFSNHRDVVVDLQGWVTGNGKGLIYLTDPQIHSV 1200
Query: 1201 DQKVFTTNFGKRGIFYFFNNQHVECNEICHRLSLTRPSMEKPCT 1244
DQKVFTTNFGKRGIFYFFNNQHVECNEICHRLSLTRPSMEKPCT
Sbjct: 1201 DQKVFTTNFGKRGIFYFFNNQHVECNEICHRLSLTRPSMEKPCT 1244
>gi|9558749 elongation factor-2 kinase [Homo sapiens]
Length = 725
Score = 73.9 bits (180), Expect = 9e-13
Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 18/183 (9%)
Query: 1054 HLHQEEILGRYVGKDYKEQKGLWHHFTDVERQMTAQHYVTEFNKRLYEQNIPTQIFYIPS 1113
H Q + YV K Y E +F DV QM A+ + E+N+ P + I
Sbjct: 157 HAQQWKGASNYVAKRYIEPVDRDVYFEDVRLQMEAKLWGEEYNRHK-----PPKQVDIMQ 211
Query: 1114 TILLILEDKTIKGCISVEPYILGEFVKLSNNTKVVKTE-YKATEYGLAYGHFSYEFSNHR 1172
++ L+D+ K +E YI G+++K ++N+ V+ + + T A+ HF++E S H+
Sbjct: 212 MCIIELKDRPGKPLFHLEHYIEGKYIKYNSNSGFVRDDNIRLTPQ--AFSHFTFERSGHQ 269
Query: 1173 DVVVDLQGWVTGNGKGLIYLTDPQIHSVDQKVF-TTNFGKRGIFYFFNNQHVECNEICHR 1231
+VVD+Q G G +Y TDPQIH+ F N G RG+ FF + CN IC
Sbjct: 270 LIVVDIQ------GVGDLY-TDPQIHTETGTDFGDGNLGVRGMALFFYSH--ACNRICES 320
Query: 1232 LSL 1234
+ L
Sbjct: 321 MGL 323
>gi|18921093 transient receptor potential cation channel, subfamily M,
member 6 [Homo sapiens]
Length = 2022
Score = 53.9 bits (128), Expect = 9e-07
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 24/177 (13%)
Query: 1067 KDYKEQKGLWHHFTDVERQMTAQHYVTEFNKRLYEQNIPTQIFYIPSTI-LLILEDKTIK 1125
K ++E L ++++Q AQ + FN+ + Q IP Y P + + ++ +
Sbjct: 1816 KIFQESTVLHLCLREIQQQRAAQKLIYTFNQ-VKPQTIP----YTPRFLEVFLIYCHSAN 1870
Query: 1126 GCISVEPYILGEFVKLSNNT--KVVKTEYKATEYGLAYGHFSYEFSNHRDVVVDLQGWVT 1183
+++E Y+ GEF K +NN ++ T E LA+ H++YE++ +V+DLQG V
Sbjct: 1871 QWLTIEKYMTGEFRKYNNNNGDEITPTN-TLEELMLAFSHWTYEYTRGELLVLDLQG-VG 1928
Query: 1184 GNGKGLIYLTDPQIHSVDQK-----VF-TTNFGKRGIFYFFNNQHVECNEICHRLSL 1234
N LTDP + + K VF N G+ I F H CN C +L L
Sbjct: 1929 EN------LTDPSVIKPEVKQSRGMVFGPANLGEDAIRNFIAKHH--CNSCCRKLKL 1977
>gi|148612863 transient receptor potential cation channel, subfamily
M, member 7 [Homo sapiens]
Length = 1865
Score = 53.9 bits (128), Expect = 9e-07
Identities = 54/175 (30%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 1069 YKEQKGLWHHFTDVERQMTAQHYVTEFNKRLYEQNIPTQIFYIPSTI-LLILEDKTIKGC 1127
YKE L ++++Q AQ FN Q P I Y P + + +L +
Sbjct: 1662 YKEDTVLHLCLREIQQQRAAQKLTFAFN-----QMKPKSIPYSPRFLEVFLLYCHSAGQW 1716
Query: 1128 ISVEPYILGEFVKLSNNT--KVVKTEYKATEYGLAYGHFSYEFSNHRDVVVDLQGWVTGN 1185
+VE + GEF K +NN +++ T E LA+ H++YE++ +V+DLQG V N
Sbjct: 1717 FAVEECMTGEFRKYNNNNGDEIIPTN-TLEEIMLAFSHWTYEYTRGELLVLDLQG-VGEN 1774
Query: 1186 GKGLIYLTDPQIHSVDQK-----VF-TTNFGKRGIFYFFNNQHVECNEICHRLSL 1234
LTDP + ++K VF N G+ I F H CN C +L L
Sbjct: 1775 ------LTDPSVIKAEEKRSCDMVFGPANLGEDAIKNFRAKHH--CNSCCRKLKL 1821
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 34.7 bits (78), Expect = 0.58
Identities = 56/266 (21%), Positives = 95/266 (35%), Gaps = 25/266 (9%)
Query: 571 NKSLSGSQTSSAWSNLSGFSSSASWEEVNYHVDDRSARKEPGKEHLVDTQCSTALSEELE 630
N+S+ S +SS+ S+ S SSS+S + S+ + ST+ S+ +
Sbjct: 143 NRSIHTSSSSSSSSSSSSSSSSSS----SSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHK 198
Query: 631 NDREGRAMHSLHSQLHDLSLQEPNND--------NLEPSQNQPQQQMPLTPFSPHNTPGI 682
+E + S S+ H + +EP+ D + +P +N+P ++ + P
Sbjct: 199 LMKEHKEKPSKDSREHKSAFKEPSRDHNKSSKESSKKPKENKPLKEEKIVP------KMA 252
Query: 683 FLAPGAGLLEGAPEGIQEVRNMGPRNTSAHSRPSYRSASWSSDSGRPKNMGTHPSVQKEE 742
F P E P+ G + RP + S R K+
Sbjct: 253 FKEPKPMSKEPKPDSNLLTITSGQDKKAPSKRPPISDSEELSAKKRKKSSSEALFKSFSS 312
Query: 743 AFEIIVEFPETNCDVKD----RQGKEQGEEISERGAGPTFKASPSWVDPEGETAESTEDA 798
A +I+ +KD + GK + E + T VDP E +
Sbjct: 313 APPLILTCSADKKQIKDKSHVKMGKVKIESETSEKKKSTLPPFDDIVDPNDSDVEENISS 372
Query: 799 PLDFHRVLHNSLGNISMLPCSSFTPN 824
D + S + S SSFTP+
Sbjct: 373 KSDSEQ---PSPASSSSSSSSSFTPS 395
>gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens]
Length = 621
Score = 34.7 bits (78), Expect = 0.58
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Query: 709 TSAHSRPSYRSASWSSDSGRPKNMGTHPSVQKEEAFEIIVEFPETNCDVKDRQGKEQGEE 768
T+A S + SS P G PS+ E+F + FP ++C+ +G E
Sbjct: 144 TAAGSEEPSSAGGLSSSCSDPSPPGESPSLDSLESFSNLHSFP-SSCEFNSEEGAENRVP 202
Query: 769 ISERGAGPTFKASPSWVDPEGE 790
E GA A P + EGE
Sbjct: 203 EEEEGAAVLPGAVPLCKEEEGE 224
>gi|123701326 zinc finger protein 831 [Homo sapiens]
Length = 1677
Score = 34.7 bits (78), Expect = 0.58
Identities = 65/289 (22%), Positives = 102/289 (35%), Gaps = 38/289 (13%)
Query: 705 GPRNTSAHSRPSYRSASW--------SSDSGRPKNMGTHPSVQKEEAFEIIVEFPETNCD 756
GPR HS+ S S+ W S G P + EA + I+E P +
Sbjct: 959 GPR----HSQDSLCSSGWPEERASFVGSGLGTPLSPSPASGPSPGEA-DSILEDPSCSRP 1013
Query: 757 VKDRQGKEQGEEISERGAGPTFKASPSWVDPEGETAESTEDAPL-------------DFH 803
R+G + G + +R A A + G E+T P D H
Sbjct: 1014 QDGRKGAQLGGDKGDRMATSRPAARELPISAPGAPREATSSPPTPTCEAHLVQDMEGDSH 1073
Query: 804 RVLHNSLGN------ISMLPCSSFTPNWPVQNPDSRKSGGPVAEQGIDPDASTVDEEGQL 857
R+ +G+ +S + + PNW + P P + + PD + + G
Sbjct: 1074 RIHRLCMGSTLARARLSGDVLNPWVPNWELGEPPGNAPEDPSSGPLVGPDPCSPLQPGSF 1133
Query: 858 LDSMDVPCTNGHGSHRLCILRQPPGQRAETPNSSVSGNILFPVLSEDCTTTEEGNQPGNM 917
L ++ P G L + R+ + S S FP L + T
Sbjct: 1134 LTALTRPQGVPPGWPELALSSHSGTSRSHSTRSPHSTQNPFPSLKAEPRLTWCCLSRSVP 1193
Query: 918 LNCSQNSSSSSVWWLKSPAFSSGSSEGDS--PWSYLNSSGSSWVSLPGK 964
L Q + ++SV+ SS EG + P S + G +W S PG+
Sbjct: 1194 LPAEQKAKAASVYLAVHFPGSSLRDEGPNGPPGS---NGGWTWTS-PGE 1238
>gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens]
Length = 620
Score = 34.7 bits (78), Expect = 0.58
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Query: 709 TSAHSRPSYRSASWSSDSGRPKNMGTHPSVQKEEAFEIIVEFPETNCDVKDRQGKEQGEE 768
T+A S + SS P G PS+ E+F + FP ++C+ +G E
Sbjct: 144 TAAGSEEPSSAGGLSSSCSDPSPPGESPSLDSLESFSNLHSFP-SSCEFNSEEGAENRVP 202
Query: 769 ISERGAGPTFKASPSWVDPEGE 790
E GA A P + EGE
Sbjct: 203 EEEEGAAVLPGAVPLCKEEEGE 224
>gi|47059492 hypothetical protein LOC80111 [Homo sapiens]
Length = 165
Score = 34.7 bits (78), Expect = 0.58
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 11/83 (13%)
Query: 823 PNWPVQNPDSRKSGGPVAEQGIDPDASTVDEEGQLLDSMDVPCTNGHGSHRLCILRQPPG 882
P W +P+ ++ P Q P ST + PC+ G G+H LC L G
Sbjct: 72 PEWAAPHPEEQRRSPPACSQHTPPLPST--------PTGPPPCSPG-GNHPLCALSGRGG 122
Query: 883 QRAETPNSSVSGNILFPVLSEDC 905
R P S+S + F + S C
Sbjct: 123 GRCSIP--SLSSSSTFSLFSSGC 143
>gi|7657138 golgi integral membrane protein 4 [Homo sapiens]
Length = 696
Score = 33.1 bits (74), Expect = 1.7
Identities = 42/193 (21%), Positives = 67/193 (34%), Gaps = 32/193 (16%)
Query: 609 KEPGKEHLVDTQCSTALSEELENDREGR-AMHSLHSQLHDLSLQEPNNDNL--------- 658
+ P +E L + + EE + RE + A+H Q H L QE +
Sbjct: 404 QSPYEEQLEQQRLAVQQVEEAQQLREHQEALHQQRLQGHLLRQQEQQQQQVAREMALQRQ 463
Query: 659 -EPSQNQPQQQMPLTPFSPHNTPGIFLAPGA---GL----------------LEGAPEGI 698
E + +PQ Q L + ++ + GA G+ EG P
Sbjct: 464 AELEEGRPQHQEQLRQQAHYDAMDNDIVQGAEDQGIQGEEGAYERDNQHQDEAEGDPGNR 523
Query: 699 QEVRNMGPRNTSAHSRPSYRSASWSSDSGRPKNMGTHPSVQKEEAFEIIVEFPETNCDVK 758
E R GPR S + + + P N G + E+ E P+ N + K
Sbjct: 524 HEPREQGPREADPESEADRAAVEDINPADDPNNQGEDEFEEAEQVRE--ENLPDENEEQK 581
Query: 759 DRQGKEQGEEISE 771
K++ E+ E
Sbjct: 582 QSNQKQENTEVEE 594
>gi|39930383 BarH-like homeobox 2 [Homo sapiens]
Length = 387
Score = 33.1 bits (74), Expect = 1.7
Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 10/147 (6%)
Query: 642 HSQLHDLSLQEPNNDNLEPSQNQ---PQQQMPLTPFSPHNTPGIFLAPGAGLLEGAPEGI 698
H LH Q+P P+Q+ PQQQ PL P P P L A +
Sbjct: 85 HHHLHHS--QQPPPPAAAPTQSLQPLPQQQQPLPPQQPPPPPPQQLGSAASAPRTSTSSF 142
Query: 699 QEVRNMGPRNTSAHSRPSYRSASWSSDSGRPKNMGTH----PSVQKEEAFEIIVEFPETN 754
+G A P S S + + ++ H P +++E++ + + ++
Sbjct: 143 LIKDILGDSKPLAACAPYSTSVSSPHHTPKQESNAVHESFRPKLEQEDSKTKLDKREDSQ 202
Query: 755 CDVKDRQGKEQGE-EISERGAGPTFKA 780
D+K KE+G+ EI+ P +A
Sbjct: 203 SDIKCHGTKEEGDREITSSRESPPVRA 229
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 32.7 bits (73), Expect = 2.2
Identities = 42/195 (21%), Positives = 68/195 (34%), Gaps = 20/195 (10%)
Query: 709 TSAHSRPSYRSASWSSDSGRPKNMGTHPSVQKEEAF--------EIIVEFPETNCDVKDR 760
T+ +PS + SS G GT P +F + + + + R
Sbjct: 289 TADSPKPSAKKQKKSSSKGSRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEKVKAESEPR 348
Query: 761 QGKEQGE-EISERGAGPTFKASPSWVDPEGETAESTEDAPLDFHRVLHNSLGNISMLPCS 819
+ K+ E E S +FK+ + P ++ S + DF ++S G + +
Sbjct: 349 EAKKALEVEESNSEDEASFKSESAQSSPSNSSSSSDSSSDSDFEPSQNHSQGPLRSM--- 405
Query: 820 SFTPNWPVQNPDSRKSGGPVAEQGIDPDASTVDEEGQLLDSMDVPCTNGHGSHRLCILRQ 879
V++ S +S + G + T L D N S L
Sbjct: 406 -------VEDLQSEESDEDDSSSGEEAAGKTNPGRDSRLSFSDSESDNSADSS-LPSREP 457
Query: 880 PPGQRAETPNSSVSG 894
PP Q+ PNS VSG
Sbjct: 458 PPPQKPPPPNSKVSG 472
>gi|116875765 tight junction protein 1 isoform b [Homo sapiens]
Length = 1668
Score = 32.3 bits (72), Expect = 2.9
Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 10/160 (6%)
Query: 530 ELRRGGRRNWTHSDAFRVSLDQDVETETEPSDYSNGEGAVFNKSLSGSQTSSAWSNLSGF 589
E R+ R+ + S R + T + ++G +++ Q W + G
Sbjct: 746 ESRKSARKLYERSHKLRKNNHHLFTTTINLNSMNDGWYGALKEAIQQQQNQLVWVS-EGK 804
Query: 590 SSSASWEEVNYHVDDRSARKEPGKEHLVDTQCSTALSEELENDREGRAM--HSLHSQLHD 647
+ A+ ++++ H D S PG E+ + + S S+ + D EG A L L+D
Sbjct: 805 ADGATSDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYEDTDTEGGAYTDQELDETLND 864
Query: 648 -------LSLQEPNNDNLEPSQNQPQQQMPLTPFSPHNTP 680
++ + E S + P+SP P
Sbjct: 865 EVGTPPESAITRSSEPVREDSSGMHHENQTYPPYSPQAQP 904
>gi|116875767 tight junction protein 1 isoform a [Homo sapiens]
Length = 1748
Score = 32.3 bits (72), Expect = 2.9
Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 10/160 (6%)
Query: 530 ELRRGGRRNWTHSDAFRVSLDQDVETETEPSDYSNGEGAVFNKSLSGSQTSSAWSNLSGF 589
E R+ R+ + S R + T + ++G +++ Q W + G
Sbjct: 746 ESRKSARKLYERSHKLRKNNHHLFTTTINLNSMNDGWYGALKEAIQQQQNQLVWVS-EGK 804
Query: 590 SSSASWEEVNYHVDDRSARKEPGKEHLVDTQCSTALSEELENDREGRAM--HSLHSQLHD 647
+ A+ ++++ H D S PG E+ + + S S+ + D EG A L L+D
Sbjct: 805 ADGATSDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYEDTDTEGGAYTDQELDETLND 864
Query: 648 -------LSLQEPNNDNLEPSQNQPQQQMPLTPFSPHNTP 680
++ + E S + P+SP P
Sbjct: 865 EVGTPPESAITRSSEPVREDSSGMHHENQTYPPYSPQAQP 904
>gi|4758668 serine palmitoyltransferase, long chain base subunit 2
[Homo sapiens]
Length = 562
Score = 32.3 bits (72), Expect = 2.9
Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 9/132 (6%)
Query: 17 VLDQLLLEAPDVSEED-KSEDQRCRALLPSELRTLIQEAKEMKW--------PFVPEKWQ 67
V++Q++ + +D S + C L R + KEM + P VP
Sbjct: 415 VVEQIITSMKCIMGQDGTSLGKECVQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY 474
Query: 68 YKQAVGPEDKTNLKDVIGAGLQQLLASLRASILARDCAAAAAIVFLVDRFLYGLDVSGKL 127
+G + LK IG + A+ AR C +AA ++D L +D G L
Sbjct: 475 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL 534
Query: 128 LQVAKGLHKLQP 139
LQ+ H+L P
Sbjct: 535 LQLKYSRHRLVP 546
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 32.3 bits (72), Expect = 2.9
Identities = 82/487 (16%), Positives = 159/487 (32%), Gaps = 19/487 (3%)
Query: 471 ESDCGNNKNEQKDAKTGVCITALKTEIKNIDTVSTTQEKPHCQRDTGISSSLMGKNVQRE 530
ESD ++ ++ + + ++ ++ + S + + + SSS N
Sbjct: 630 ESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDS 689
Query: 531 LRRGGRRNWTHSDAFRVSLDQDVETETEPSDYSNGEGAVFNKSLSGSQTSSAWSNLSGFS 590
N + S S D D ++ SD SN N S S S SS S+ S S
Sbjct: 690 SDSSDSSNSSESSDSSDSSDSD---SSDSSDSSNS-----NSSDSDSSNSSDSSDSSNSS 741
Query: 591 SSASWEEVNYHVDDRSARKEPGKEHLVDTQCSTALSEELENDREGRAMHSLHSQLHDLSL 650
S+ + + D + D+ S+ S+ + + +S S S
Sbjct: 742 DSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSS 801
Query: 651 QEPNNDNLEPSQNQPQQQMPLTPFSPHNTPGIFLAPGAGLLEGAPEGIQEVRNMGPRNTS 710
N+ + S + + S +++ + + + + + R+ S
Sbjct: 802 DSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDS 861
Query: 711 AHSRPSYRSASWSSDSGRPKNMGTHPSVQKEEAFEIIVEFPETNCDVKDRQGKEQGEEIS 770
++S S S+ S+ S + ++ S ++ + +N D + S
Sbjct: 862 SNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSD------SSNSSDSDSSDSSNSSDSS 915
Query: 771 ERGAGPTFKASPSWVDPEGETAESTEDAPLDFHRVLHNSLGNISMLPCSSFTPNWPVQNP 830
+ S + D + S D + N S SS + N +
Sbjct: 916 DSSNSSDSSESSNSSDNSNSSDSSNSSDSSD-----SSDSSNSSDSSNSSDSSNSSDSSD 970
Query: 831 DSRKSGGPVAEQGIDPDASTVDEEGQLLDSMDVPCTNGHGSHRLCILRQPPGQRAETPNS 890
+ + D+S + DS + ++ +++ NS
Sbjct: 971 SNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNS 1030
Query: 891 SVSGNILFPVLSEDCTTTEEGNQPGNMLNCSQNSSSSSVWWLKSPAFSSGSSEGDSPWSY 950
S S + S D + + + + N + S +S SS + SS SSE
Sbjct: 1031 SDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDS 1090
Query: 951 LNSSGSS 957
NSS SS
Sbjct: 1091 SNSSDSS 1097
>gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens]
Length = 619
Score = 32.3 bits (72), Expect = 2.9
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 604 DRSARKEPGK-EHLVDTQCSTALSEELENDREGRAMHSLHSQLHDLSLQEPNNDNLEPSQ 662
D S + P K +HL + S + ++ + G H + D S++ +NL P
Sbjct: 182 DISCHQSPSKTDHLTEKAYSDTPRDFPDSFQAGSPGHL--GVIRDFSIESLLRENLYPKA 239
Query: 663 NQPQQQMPLTPFS----PHNTPGIF 683
N P ++ L+PF+ PH PG F
Sbjct: 240 NIPDRRPSLSPFAPDFFPHLWPGDF 264
>gi|70980547 FYVE-finger-containing Rab5 effector protein
rabenosyn-5 [Homo sapiens]
Length = 784
Score = 32.3 bits (72), Expect = 2.9
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 16/116 (13%)
Query: 607 ARKEPGKEHLVDTQCSTALSEELENDREGRAMHSLHSQLHDLSLQEPNNDNLEPSQNQ-- 664
+R++ +E L Q ELE +RE + SLH++ L +E LEPS+
Sbjct: 508 SRRQAEEEDLQREQLQMLRERELEREREQFRVASLHTRTRSLDFREIGPFQLEPSREPRT 567
Query: 665 -------------PQQQMPLTPFSPHNTP-GIFLAPGAGLLEGAPEGIQEVRNMGP 706
P P TP P ++ P A E P+ ++ GP
Sbjct: 568 HLAYALDLGSSPVPSSTAPKTPSLSSTQPTRVWSGPPAVGQERLPQSSMPQQHEGP 623
>gi|57529131 AVL9 homolog (S. cerevisiase) [Homo sapiens]
Length = 648
Score = 32.0 bits (71), Expect = 3.8
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 588 GFSSSASWEEVNYHVDDRSARKEPGKEHLVDTQCSTALSEELENDREGRAMHSLHSQLHD 647
G ++ EE + V+D S +EP + S + E+D E S L D
Sbjct: 286 GEDAAMKTEEPLFQVEDSSKGQEPNDTNQYLKPPSRPSPDSSESDWETLDP----SVLED 341
Query: 648 LSLQE-----PNNDNLEPSQNQPQQQMPLTPFSPHNTPGIFLAPGAGLLEGAPE 696
+L+E + NL P + P + +P+T NT + L P GL+ G E
Sbjct: 342 PNLKEREQLGSDQTNLFPKDSVPSESLPITVQPQANTGQVVLIP--GLISGLEE 393
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 32.0 bits (71), Expect = 3.8
Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 2/123 (1%)
Query: 472 SDCGNNKNEQKDAKTGVCITALKTEIKNIDTVSTTQEKPHCQRDTGISSSLMGKNVQREL 531
S G N + + TA +E + + +T + + T S + N +
Sbjct: 250 SGAGTATNSESSTTSSGAGTATNSESSTVSSGISTVT--NSESSTPSSGANTATNSESST 307
Query: 532 RRGGRRNWTHSDAFRVSLDQDVETETEPSDYSNGEGAVFNKSLSGSQTSSAWSNLSGFSS 591
G T+SD+ S T +E S S+G N S + + ++ + SG S+
Sbjct: 308 TSSGANTATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSST 367
Query: 592 SAS 594
++S
Sbjct: 368 TSS 370
>gi|24415404 MDN1, midasin homolog [Homo sapiens]
Length = 5596
Score = 32.0 bits (71), Expect = 3.8
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 593 ASWEEVNYHVDDRSARKEPGKEHLVDTQCSTALSEELENDREGRAMHSLHSQ-LHDLSLQ 651
+ W+E + A +E G TALSEE E +RE R LH + D+ +Q
Sbjct: 3533 SEWDEQE-RIAQEKAEQESGLYRYRSRNSRTALSEEEEEEREFRKQFPLHEKDFADILVQ 3591
Query: 652 EPNNDNLEPSQNQPQQ 667
+N S Q ++
Sbjct: 3592 PTLEENKGTSDGQEEE 3607
>gi|130484306 retinoic acid early transcript 1G [Homo sapiens]
Length = 334
Score = 31.6 bits (70), Expect = 4.9
Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 18/105 (17%)
Query: 776 PTFKASPSWVDPEGETAESTEDAPLDFHRVLHNSLGNISMLPCS------SFTPNWPVQN 829
P F+ P W +G+ E T LH G+ ++ P S + T W QN
Sbjct: 41 PKFRPGPRWCAVQGQVDEKT---------FLHYDCGSKTVTPVSPLGKKLNVTTAWKAQN 91
Query: 830 PDSRKSGGPVAEQGIDPDASTVDEEGQLLDSMDVPC---TNGHGS 871
P R+ + EQ +D + L + C GHGS
Sbjct: 92 PVLREVVDILTEQLLDIQLENYIPKEPLTLQARMSCEQKAEGHGS 136
>gi|28558977 mediator complex subunit 26 [Homo sapiens]
Length = 600
Score = 31.6 bits (70), Expect = 4.9
Identities = 43/206 (20%), Positives = 77/206 (37%), Gaps = 16/206 (7%)
Query: 670 PLTP-FSPHNTPGIFLAPG--AGLLEGA----PEGIQEVRNMGPRNTSAHSRPSYRSASW 722
PL P SP T GI +P A L+G+ PEG + R+ +++ + R +
Sbjct: 172 PLVPNSSPLPTNGISGSPESFASSLDGSGHAGPEGSRLERDENDKHSGKIPVNAVRPHTS 231
Query: 723 SSDSGRPKNMGTHPSVQKEEAFEIIVEFP-------ETNCDVKDRQGKEQGEEISERGAG 775
S G+P P + + + E P C R + +G ++
Sbjct: 232 SPGLGKPPGPCLQPKASVLQQLDRVDETPGPPHPKGPPRCSFSPRNSRHEGSFARQQSLY 291
Query: 776 PTFKASPSWVDPEGETAESTE-DAPLDFHRVLHNSLGNISMLPCSSFTPNWPVQNPDSRK 834
+ PS P + ++T+ +PL + + + +LP + W Q ++
Sbjct: 292 APKGSVPS-PSPRPQALDATQVPSPLPLAQPSTPPVRRLELLPSAESPVCWLEQPESHQR 350
Query: 835 SGGPVAEQGIDPDASTVDEEGQLLDS 860
GP + G+ P + G DS
Sbjct: 351 LAGPGCKAGLSPAEPLLSRAGFSPDS 376
>gi|14149807 coiled-coil domain containing 55 isoform 1 [Homo
sapiens]
Length = 558
Score = 31.6 bits (70), Expect = 4.9
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 724 SDSGRPKNMGT--HPSVQKEEAFEIIVEFPETNCDVKDRQGKEQGEEISERG-----AGP 776
+D RP G S KEE ++ E E N +DR+ +E G + SER + P
Sbjct: 399 NDQNRPSEKGEKEEKSKAKEEHMKVRKERYENNDKYRDREKREVGVQSSERNQDRKESSP 458
Query: 777 TFKASPSWVDPE 788
+A ++D E
Sbjct: 459 NSRAKDKFLDQE 470
>gi|126723295 retinoic acid early transcript 1L [Homo sapiens]
Length = 246
Score = 31.6 bits (70), Expect = 4.9
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 15/76 (19%)
Query: 776 PTFKASPSWVDPEGETAESTEDAPLDFHRVLHNSLGNISMLPCS------SFTPNWPVQN 829
P F+ P W +G+ E T LH GN ++ P S + T W QN
Sbjct: 41 PKFRPGPRWCAVQGQVDEKT---------FLHYDCGNKTVTPVSPLGKKLNVTMAWKAQN 91
Query: 830 PDSRKSGGPVAEQGID 845
P R+ + EQ +D
Sbjct: 92 PVLREVVDILTEQLLD 107
>gi|122056617 LIM domain binding 3 isoform 3 [Homo sapiens]
Length = 330
Score = 31.2 bits (69), Expect = 6.4
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 637 AMHSLHSQLHDLSLQEPNNDNLEP-SQNQPQQQMPLTPFSPH------NTPGIFLAPGAG 689
A + + S ++LSL + P S P Q PL P PH +T G +AP
Sbjct: 65 AQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPL-PVIPHQKDPALDTNGSLVAPSPS 123
Query: 690 LLEGAPEGIQEVRNMGPRNTSAHSRPS-YRSASWSSDSGRPK 730
A G + P + A SRPS + S + +SD G P+
Sbjct: 124 PEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPR 165
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 31.2 bits (69), Expect = 6.4
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 637 AMHSLHSQLHDLSLQEPNNDNLEP-SQNQPQQQMPLTPFSPH------NTPGIFLAPGAG 689
A + + S ++LSL + P S P Q PL P PH +T G +AP
Sbjct: 65 AQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPL-PVIPHQKDPALDTNGSLVAPSPS 123
Query: 690 LLEGAPEGIQEVRNMGPRNTSAHSRPS-YRSASWSSDSGRPK 730
A G + P + A SRPS + S + +SD G P+
Sbjct: 124 PEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPR 165
>gi|38201677 teashirt family zinc finger 1 [Homo sapiens]
Length = 1032
Score = 31.2 bits (69), Expect = 6.4
Identities = 59/296 (19%), Positives = 104/296 (35%), Gaps = 41/296 (13%)
Query: 608 RKEPGKEHLVDTQCSTALSEELENDREGRAMHSLHSQLHDLSLQEPNNDNLEPSQNQPQQ 667
+KEP KE + + EE E+ E +L+ L + L + L+ ++
Sbjct: 454 KKEPEKEKPPVAGDAEKIKEESEDSLEKFEPSTLYPYLREEDLDDSPKGGLDILKSLENT 513
Query: 668 QMPLTPFSPHNTPGIFLAPGA-------GLLEGAPEGIQEVRNMGPRNTSAHSRPSYRSA 720
+ + P P G ++ P +Q V+ + + A S SA
Sbjct: 514 VSTAISKAQNGAPSWGGYPSIHAAYQLPGTVKPLPAAVQSVQ---VQPSYAGGVKSLSSA 570
Query: 721 SWSSDSGRPKNMGTHPSVQKEEAFEIIVEFPETNCDVKDRQGKEQGEEIS-ERGAGPTFK 779
++ P ++ P A E +VE ++K + + E+ S + A P K
Sbjct: 571 EHNALLHSPGSLTPPPHKSNVSAMEELVEKVTGKVNIKKEERPPEKEKSSLAKAASPIAK 630
Query: 780 AS------------PSWVDPEGETAESTEDAPLDFH---------RVLHNSLGNISMLPC 818
+ P PE ET ++ ++ PLD H + N N+ ++
Sbjct: 631 ENKDFPKTEEVSGKPQKKGPEAETGKAKKEGPLDVHTPNGTEPLKAKVTNGCNNLGIIMD 690
Query: 819 SSFTPNW--------PVQNPDSRKSGGPVAEQGIDPDASTVDEEGQLLDSMDVPCT 866
S P++ + N K PV+ +DP A +LD P T
Sbjct: 691 HSPEPSFINPLSALQSIMNTHLGKVSKPVS-PSLDPLAMLYKISNSMLDKPVYPAT 745
>gi|4507887 vascular endothelial growth factor B [Homo sapiens]
Length = 207
Score = 31.2 bits (69), Expect = 6.4
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 643 SQLHDLSLQEPNNDNLEPSQNQPQQQMPLTPFSPHNTPGIFLAPGAGLLEGAPEGIQEVR 702
SQL ++SL+E + P + + P +PH+ P PG GAP
Sbjct: 109 SQLGEMSLEEHSQCECRPKKKDSAVK-PDRAATPHHRPQPRSVPGWDSAPGAPSPADITH 167
Query: 703 NMGPRNTSAHSRPSYRSA 720
SAH+ PS SA
Sbjct: 168 PTPAPGPSAHAAPSTTSA 185
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,130,479
Number of Sequences: 37866
Number of extensions: 2411402
Number of successful extensions: 5540
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 5494
Number of HSP's gapped (non-prelim): 87
length of query: 1244
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1130
effective length of database: 13,930,794
effective search space: 15741797220
effective search space used: 15741797220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.