SPTLC2 30739

Name: SPTLC2	Sequence: fasta or formatted (562aa)		NCBI GI: 4758668
Description: serine palmitoyltransferase, long chain base subunit 2		Referenced in: Sphingomyelin, Ceramides, and Glycolipids
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 45 9 C cysteine 2.1 12 3 D aspartate 3.9 22 1 E glutamate 7.7 43 2 F phenylalanine 3.7 21 1 G glycine 9.1 51 2 H histidine 2.3 13 2 I isoleucine 5.9 33 2 K lysine 5.0 28 3 L leucine 9.1 51 2 M methionine 3.2 18 2 N asparagine 4.1 23 2 P proline 3.7 21 2 Q glutamine 2.5 14 2 R arginine 6.9 39 3 S serine 5.2 29 2 T threonine 4.8 27 2 V valine 6.9 39 4 W tryptophan 0.7 4 1 Y tyrosine 5.2 29 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 serine palmitoyltransferase, long chain base subunit ... SPTLC3 0.676 serine palmitoyltransferase, long chain base subuni... GCAT 0.146 glycine C-acetyltransferase precursor SPTLC1 0.126 serine palmitoyltransferase subunit 1 isoform a [Homo... ALAS1 0.118 5-aminolevulinate synthase 1 ALAS1 0.118 5-aminolevulinate synthase 1 ALAS2 0.116 5-aminolevulinate synthase 2 isoform c precursor [Ho... ALAS2 0.116 5-aminolevulinate synthase 2 isoform b precursor [Ho... ALAS2 0.116 5-aminolevulinate synthase 2 isoform a precursor [Ho... ALPK1 0.006 alpha-kinase 1 ALPK1 0.006 alpha-kinase 1 SPTLC1 0.006 serine palmitoyltransferase subunit 1 isoform b [Hom... MDN1 0.004 MDN1, midasin homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.