Guide to the Human Genome
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Name: CRLF3 Sequence: fasta or formatted (442aa) NCBI GI: 156142186
Description:

cytokine receptor-like factor 3

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         21           2
 C cysteine            2.3         10           1
 D aspartate           6.6         29           3
 E glutamate           8.6         38           2
 F phenylalanine       4.3         19           2
 G glycine             7.5         33           2
 H histidine           2.5         11           1
 I isoleucine          4.8         21           2
 K lysine              4.1         18           2
 L leucine             9.7         43           3
 M methionine          0.9          4           1
 N asparagine          3.6         16           2
 P proline             3.6         16           2
 Q glutamine           5.2         23           1
 R arginine            6.3         28           2
 S serine              7.2         32           2
 T threonine           5.9         26           2
 V valine              8.4         37           2
 W tryptophan          1.6          7           1
 Y tyrosine            2.3         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytokine receptor-like factor 3 
ODF2L                 0.017   outer dense fiber of sperm tails 2-like isoform b [H...
ODF2L                 0.017   outer dense fiber of sperm tails 2-like isoform a [H...
IL23R                 0.014   interleukin 23 receptor precursor 
FAM184A               0.014   hypothetical protein LOC79632 isoform 2 
FAM184A               0.014   hypothetical protein LOC79632 isoform 1 
FNDC3B                0.011   fibronectin type III domain containing 3B 
FNDC3B                0.011   fibronectin type III domain containing 3B 
GOLGA4                0.011   golgi autoantigen, golgin subfamily a, 4 
TRIM63                0.011   muscle specific ring finger protein 1 
CCDC152               0.010   coiled-coil domain containing 152 
PRTG                  0.009   protogenin 
RILP                  0.009   Rab interacting lysosomal protein 
CCPG1                 0.009   cell cycle progression 1 isoform 2 
CCPG1                 0.009   cell cycle progression 1 isoform 1 
CENPE                 0.009   centromere protein E 
KALRN                 0.009   kalirin, RhoGEF kinase isoform 1 
KALRN                 0.009   kalirin, RhoGEF kinase isoform 3 
IL6ST                 0.009   interleukin 6 signal transducer isoform 2 precursor ...
IL6ST                 0.009   interleukin 6 signal transducer isoform 1 precursor ...
CEP250                0.009   centrosomal protein 2 
OAS2                  0.009   2'-5'-oligoadenylate synthetase 2 isoform 2 
OAS2                  0.009   2'-5'-oligoadenylate synthetase 2 isoform 3 
OAS2                  0.009   2'-5'-oligoadenylate synthetase 2 isoform 1 
TRIM46                0.009   tripartite motif-containing 46 
CKAP4                 0.008   cytoskeleton-associated protein 4 
FNDC3A                0.008   fibronectin type III domain containing 3A isoform 1...
FNDC3A                0.008   fibronectin type III domain containing 3A isoform 2...
GOLGA3                0.008   Golgi autoantigen, golgin subfamily a, 3 
OLR1                  0.008   oxidized low density lipoprotein (lectin-like) recept...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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