CXCL16 5701

Name: CXCL16	Sequence: fasta or formatted (273aa)		NCBI GI: 154816176
Description: chemokine (C-X-C motif) ligand 16		Referenced in: Chemokines and Their Receptors
Other entries for this name: alt mRNA [273aa] chemokine (C-X-C motif) ligand 16
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 18 2 C cysteine 2.9 8 1 D aspartate 2.9 8 1 E glutamate 4.0 11 1 F phenylalanine 1.1 3 1 G glycine 7.0 19 2 H histidine 3.3 9 1 I isoleucine 3.3 9 2 K lysine 3.3 9 1 L leucine 12.8 35 9 M methionine 1.8 5 1 N asparagine 2.9 8 1 P proline 9.2 25 2 Q glutamine 5.5 15 1 R arginine 5.9 16 3 S serine 12.5 34 2 T threonine 6.2 17 2 V valine 5.1 14 1 W tryptophan 0.7 2 1 Y tyrosine 2.9 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chemokine (C-X-C motif) ligand 16 CXCL16 1.000 chemokine (C-X-C motif) ligand 16 BCORL1 0.019 BCL6 co-repressor-like 1 WIPF2 0.015 WIRE protein MUC6 0.015 mucin 6, gastric CADM1 0.013 immunoglobulin superfamily, member 4D isoform 2 [Ho... CADM1 0.013 immunoglobulin superfamily, member 4D isoform 1 [Ho... CRTC2 0.013 CREB regulated transcription coactivator 2 TUBGCP6 0.013 tubulin, gamma complex associated protein 6 LOC643750 0.013 PREDICTED: hypothetical protein FAM163B 0.013 hypothetical LOC642968 PALM2-AKAP2 0.011 PALM2-AKAP2 protein isoform 2 PALM2-AKAP2 0.011 PALM2-AKAP2 protein isoform 1 AKAP2 0.011 A kinase (PRKA) anchor protein 2 isoform 2 AKAP2 0.011 A kinase (PRKA) anchor protein 2 isoform 1 TLK1 0.011 tousled-like kinase 1 isoform 1 ITSN2 0.011 intersectin 2 isoform 3 ITSN2 0.011 intersectin 2 isoform 1 ITSN2 0.011 intersectin 2 isoform 2 SDC1 0.009 syndecan 1 precursor SDC1 0.009 syndecan 1 precursor PHACTR3 0.009 phosphatase and actin regulator 3 isoform 2 PHACTR3 0.009 phosphatase and actin regulator 3 isoform 1 CCL13 0.009 small inducible cytokine A13 precursor CRKRS 0.009 Cdc2-related kinase, arginine/serine-rich isoform 1... MLL4 0.009 myeloid/lymphoid or mixed-lineage leukemia 4 SALL1 0.008 sal-like 1 isoform b SALL1 0.008 sal-like 1 isoform a GOLGA6D 0.008 golgi autoantigen, golgin subfamily a, 6D CHRM2 0.008 cholinergic receptor, muscarinic 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.