Guide to the Human Genome
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Name: CGB7 Sequence: fasta or formatted (165aa) NCBI GI: 15451750
Description:

chorionic gonadotropin, beta polypeptide 7 precursor

Referenced in:

Proteins Measured in Common Diagnostic Tests
Ovary, Uterus and Placenta
Pituitary

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         10           1
 C cysteine            7.3         12           1
 D aspartate           3.6          6           2
 E glutamate           3.0          5           1
 F phenylalanine       1.8          3           1
 G glycine             6.7         11           2
 H histidine           0.6          1           1
 I isoleucine          3.0          5           1
 K lysine              1.8          3           1
 L leucine            11.5         19           7
 M methionine          3.0          5           1
 N asparagine          2.4          4           1
 P proline            12.7         21           3
 Q glutamine           3.6          6           1
 R arginine            7.9         13           2
 S serine              8.5         14           4
 T threonine           6.7         11           2
 V valine              7.3         12           2
 W tryptophan          0.6          1           1
 Y tyrosine            1.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chorionic gonadotropin, beta polypeptide 7 precursor... 
CGB                   0.981   chorionic gonadotropin beta 3 subunit precursor [Homo...
CGB5                  0.981   chorionic gonadotropin, beta polypeptide 5 precursor...
CGB8                  0.981   chorionic gonadotropin, beta polypeptide 8 precursor...
CGB2                  0.963   chorionic gonadotropin, beta polypeptide 2 
CGB1                  0.898   chorionic gonadotropin, beta polypeptide 1 
LHB                   0.684   luteinizing hormone beta subunit precursor 
TSHB                  0.220   thyroid stimulating hormone, beta precursor 
FSHB                  0.189   follicle stimulating hormone, beta polypeptide precu...
FSHB                  0.189   follicle stimulating hormone, beta polypeptide precur...
SSPO                  0.028   SCO-spondin 
MAP3K10               0.028   mitogen-activated protein kinase kinase kinase 10 [H...
CENPV                 0.025   proline rich 6 
SRA1                  0.025   steroid receptor RNA activator 1 
ARHGEF11              0.022   Rho guanine nucleotide exchange factor (GEF) 11 isof...
ARHGEF11              0.022   Rho guanine nucleotide exchange factor (GEF) 11 isofo...
SPINK2                0.022   serine protease inhibitor, Kazal type 2 (acrosin-try...
TMEM92                0.022   transmembrane protein 92 
AHDC1                 0.022   AT hook, DNA binding motif, containing 1 
GLTSCR1               0.019   glioma tumor suppressor candidate region gene 1 [Ho...
ANTXR1                0.019   anthrax toxin receptor 1 isoform 1 precursor 
YLPM1                 0.019   YLP motif containing 1 
SRRM1                 0.019   serine/arginine repetitive matrix 1 
WNT10B                0.015   wingless-type MMTV integration site family, member 1...
MUC2                  0.015   mucin 2 precursor 
LOC100294420          0.015   PREDICTED: similar to mucin 2 
WIPF1                 0.015   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.015   WAS/WASL interacting protein family, member 1 
SYN2                  0.015   synapsin II isoform IIa 
SYN2                  0.015   synapsin II isoform IIb 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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