Guide to the Human Genome
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Name: SPINK2 Sequence: fasta or formatted (84aa) NCBI GI: 10863911
Description:

serine protease inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1          6           2
 C cysteine            7.1          6           1
 D aspartate           1.2          1           1
 E glutamate           2.4          2           1
 F phenylalanine       4.8          4           1
 G glycine             7.1          6           2
 H histidine           2.4          2           1
 I isoleucine          6.0          5           2
 K lysine              3.6          3           1
 L leucine            13.1         11           4
 M methionine          3.6          3           1
 N asparagine          6.0          5           1
 P proline             7.1          6           1
 Q glutamine           2.4          2           1
 R arginine            7.1          6           1
 S serine              7.1          6           1
 T threonine           4.8          4           1
 V valine              3.6          3           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine protease inhibitor, Kazal type 2 (acrosin-try... 
SPINK1                0.188   serine protease inhibitor, Kazal type 1 precursor [H...
SPINK9                0.156   serine peptidase inhibitor, Kazal type 9 
SPINK6                0.156   serine protease inhibitor, Kazal type 6 
SPINK4                0.130   serine peptidase inhibitor, Kazal type 4 
SPINK7                0.130   esophagus cancer-related gene-2 
AGRN                  0.117   agrin 
SPINK5L3              0.117   serine PI Kazal type 5-like 3 
SPINK5L2              0.110   Kazal type serine protease inhibitor 5-like 2 
SPINK5                0.104   serine peptidase inhibitor, Kazal type 5 isoform c ...
SPINK5                0.104   serine peptidase inhibitor, Kazal type 5 isoform b p...
SPINK5                0.104   serine peptidase inhibitor, Kazal type 5 isoform a ...
SPINK8                0.104   serine peptidase inhibitor, Kazal type 8 (putative)...
TMEFF1                0.084   transmembrane protein with EGF-like and two follista...
FSTL5                 0.078   follistatin-like 5 isoform c 
FSTL5                 0.078   follistatin-like 5 isoform b 
FSTL5                 0.078   follistatin-like 5 isoform a 
FSTL1                 0.058   follistatin-like 1 precursor 
TMEFF2                0.045   transmembrane protein with EGF-like and two follista...
FST                   0.045   follistatin isoform FST317 precursor 
FST                   0.045   follistatin isoform FST344 precursor 
CGB                   0.045   chorionic gonadotropin beta 3 subunit precursor [Homo...
CGB5                  0.045   chorionic gonadotropin, beta polypeptide 5 precursor...
CGB2                  0.045   chorionic gonadotropin, beta polypeptide 2 
CGB1                  0.045   chorionic gonadotropin, beta polypeptide 1 
CGB7                  0.045   chorionic gonadotropin, beta polypeptide 7 precursor...
CGB8                  0.045   chorionic gonadotropin, beta polypeptide 8 precursor...
FSTL3                 0.039   follistatin-like 3 glycoprotein precursor 
FSTL4                 0.039   follistatin-like 4 
HTRA1                 0.032   HtrA serine peptidase 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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