Guide to the Human Genome
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Name: CGB8 Sequence: fasta or formatted (165aa) NCBI GI: 15426252
Description:

chorionic gonadotropin, beta polypeptide 8 precursor

Referenced in:

Proteins Measured in Common Diagnostic Tests
Ovary, Uterus and Placenta
Pituitary

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5          9           1
 C cysteine            7.3         12           1
 D aspartate           4.2          7           2
 E glutamate           3.0          5           1
 F phenylalanine       1.8          3           1
 G glycine             6.7         11           2
 H histidine           0.6          1           1
 I isoleucine          3.0          5           1
 K lysine              2.4          4           1
 L leucine            11.5         19           7
 M methionine          2.4          4           1
 N asparagine          2.4          4           1
 P proline            13.3         22           3
 Q glutamine           3.6          6           1
 R arginine            7.3         12           2
 S serine              8.5         14           4
 T threonine           6.7         11           2
 V valine              7.3         12           2
 W tryptophan          0.6          1           1
 Y tyrosine            1.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chorionic gonadotropin, beta polypeptide 8 precursor... 
CGB                   1.000   chorionic gonadotropin beta 3 subunit precursor [Homo...
CGB5                  1.000   chorionic gonadotropin, beta polypeptide 5 precursor...
CGB7                  0.975   chorionic gonadotropin, beta polypeptide 7 precursor...
CGB2                  0.963   chorionic gonadotropin, beta polypeptide 2 
CGB1                  0.914   chorionic gonadotropin, beta polypeptide 1 
LHB                   0.686   luteinizing hormone beta subunit precursor 
TSHB                  0.218   thyroid stimulating hormone, beta precursor 
FSHB                  0.188   follicle stimulating hormone, beta polypeptide precu...
FSHB                  0.188   follicle stimulating hormone, beta polypeptide precur...
CENPV                 0.028   proline rich 6 
GLTSCR1               0.028   glioma tumor suppressor candidate region gene 1 [Ho...
SSPO                  0.028   SCO-spondin 
ARHGEF11              0.022   Rho guanine nucleotide exchange factor (GEF) 11 isof...
ARHGEF11              0.022   Rho guanine nucleotide exchange factor (GEF) 11 isofo...
MAP3K10               0.022   mitogen-activated protein kinase kinase kinase 10 [H...
SPINK2                0.022   serine protease inhibitor, Kazal type 2 (acrosin-try...
YLPM1                 0.018   YLP motif containing 1 
SRA1                  0.015   steroid receptor RNA activator 1 
ANTXR1                0.015   anthrax toxin receptor 1 isoform 1 precursor 
TMEM92                0.015   transmembrane protein 92 
AHDC1                 0.015   AT hook, DNA binding motif, containing 1 
MUC5AC                0.015   mucin 5AC 
SAMD4B                0.015   sterile alpha motif domain containing 4B 
MUC2                  0.015   mucin 2 precursor 
LOC100294420          0.015   PREDICTED: similar to mucin 2 
E2F2                  0.015   E2F transcription factor 2 
SYN1                  0.015   synapsin I isoform Ia 
SYN1                  0.015   synapsin I isoform Ib 
LOC645529             0.012   PREDICTED: similar to Putative acrosin-like proteas...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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