Guide to the Human Genome
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Name: FSHB Sequence: fasta or formatted (129aa) NCBI GI: 4503791
Description:

follicle stimulating hormone, beta polypeptide precursor

Referenced in:

Proteins Measured in Common Diagnostic Tests
Pituitary

Other entries for this name:
alt mRNA [129aa] follicle stimulating hormone, beta polypeptide precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4          7           1
 C cysteine           12.4         16           2
 D aspartate           4.7          6           1
 E glutamate           6.2          8           2
 F phenylalanine       5.4          7           3
 G glycine             4.7          6           1
 H histidine           2.3          3           2
 I isoleucine          5.4          7           1
 K lysine              7.0          9           1
 L leucine             5.4          7           1
 M methionine          1.6          2           1
 N asparagine          2.3          3           1
 P proline             3.9          5           1
 Q glutamine           2.3          3           1
 R arginine            3.9          5           1
 S serine              5.4          7           1
 T threonine          10.1         13           2
 V valine              4.7          6           1
 W tryptophan          1.6          2           1
 Y tyrosine            5.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   follicle stimulating hormone, beta polypeptide precur... 
FSHB                  1.000   follicle stimulating hormone, beta polypeptide precu...
TSHB                  0.309   thyroid stimulating hormone, beta precursor 
LHB                   0.249   luteinizing hormone beta subunit precursor 
CGB                   0.230   chorionic gonadotropin beta 3 subunit precursor [Homo...
CGB5                  0.230   chorionic gonadotropin, beta polypeptide 5 precursor...
CGB2                  0.230   chorionic gonadotropin, beta polypeptide 2 
CGB1                  0.230   chorionic gonadotropin, beta polypeptide 1 
CGB7                  0.230   chorionic gonadotropin, beta polypeptide 7 precursor...
CGB8                  0.230   chorionic gonadotropin, beta polypeptide 8 precursor...
MUC5AC                0.042   mucin 5AC 
MUC5B                 0.038   mucin 5, subtype B, tracheobronchial 
OTOG                  0.030   PREDICTED: otogelin isoform 1 
OTOG                  0.030   PREDICTED: otogelin isoform 2 
OTOG                  0.030   PREDICTED: otogelin isoform 2 
OTOG                  0.030   PREDICTED: otogelin isoform 1 
OTOG                  0.030   PREDICTED: otogelin isoform 2 
OTOG                  0.030   PREDICTED: otogelin isoform 1 
LYPD2                 0.019   LY6/PLAUR domain containing 2 
STAB2                 0.019   stabilin 2 precursor 
PKD1L3                0.011   PREDICTED: polycystic kidney disease 1-like 3 [Homo...
PKD1L3                0.011   PREDICTED: polycystic kidney disease 1-like 3 [Homo...
PKD1L3                0.011   PREDICTED: polycystin 1-like 3 
PKD1L3                0.011   polycystin 1-like 3 
KRTAP4-1              0.011   keratin associated protein 4-1 
TSPAN7                0.008   tetraspanin 7 
ITGBL1                0.008   integrin, beta-like 1 (with EGF-like repeat domains) ...
LAMA5                 0.008   laminin alpha 5 
ZNF330                0.008   zinc finger protein 330 
SURF1                 0.008   surfeit 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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