Guide to the Human Genome
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Name: ALOX12 Sequence: fasta or formatted (663aa) NCBI GI: 154426292
Description:

arachidonate 12-lipoxygenase

Referenced in:

Arachidonate, Prostaglandins, and Leukotrienes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         52           3
 C cysteine            2.6         17           1
 D aspartate           5.7         38           2
 E glutamate           6.6         44           4
 F phenylalanine       3.9         26           1
 G glycine             5.9         39           4
 H histidine           2.7         18           2
 I isoleucine          4.4         29           2
 K lysine              4.1         27           1
 L leucine            12.5         83           2
 M methionine          2.7         18           1
 N asparagine          2.7         18           1
 P proline             6.5         43           3
 Q glutamine           6.0         40           2
 R arginine            6.3         42           2
 S serine              4.4         29           2
 T threonine           4.5         30           2
 V valine              5.1         34           1
 W tryptophan          2.9         19           1
 Y tyrosine            2.6         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arachidonate 12-lipoxygenase 
ALOX15                0.647   arachidonate 15-lipoxygenase 
ALOX5                 0.368   arachidonate 5-lipoxygenase 
ALOX15B               0.327   arachidonate 15-lipoxygenase, second type isoform d ...
ALOX12B               0.325   arachidonate 12-lipoxygenase, 12R type 
ALOXE3                0.323   arachidonate lipoxygenase 3 
ALOX15B               0.294   arachidonate 15-lipoxygenase, second type isoform a ...
ALOX15B               0.254   arachidonate 15-lipoxygenase, second type isoform b ...
LOC100293597          0.016   PREDICTED: similar to hCG2036697 
LOC100291435          0.016   PREDICTED: hypothetical protein XP_002347033 
LOC100287651          0.016   PREDICTED: hypothetical protein XP_002342894 
LOXHD1                0.013   lipoxygenase homology domains 1 isoform 2 
LOXHD1                0.013   lipoxygenase homology domains 1 isoform 1 
DNHD1                 0.008   dynein heavy chain domain 1 isoform 1 
DNHD1                 0.008   dynein heavy chain domain 1 isoform 2 
SON                   0.006   SON DNA-binding protein isoform F 
SON                   0.006   SON DNA-binding protein isoform B 
LOXHD1                0.005   lipoxygenase homology domains 1 isoform 3 
PRDM2                 0.005   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.005   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.005   retinoblastoma protein-binding zinc finger protein i...
C6orf132              0.004   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.004   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.004   PREDICTED: hypothetical protein LOC647024 
CHCHD5                0.004   coiled-coil-helix-coiled-coil-helix domain containin...
MTCP1                 0.004   mature T-cell proliferation 1 
LOC100293779          0.004   PREDICTED: hypothetical protein 
LOC100290521          0.004   PREDICTED: hypothetical protein XP_002347611 
LOC100288388          0.004   PREDICTED: hypothetical protein XP_002343429 
IGSF9B                0.004   immunoglobulin superfamily, member 9B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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