Guide to the Human Genome
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Name: ALOX15 Sequence: fasta or formatted (662aa) NCBI GI: 40316937
Description:

arachidonate 15-lipoxygenase

Referenced in:

Arachidonate, Prostaglandins, and Leukotrienes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         46           2
 C cysteine            2.0         13           1
 D aspartate           5.4         36           2
 E glutamate           6.6         44           3
 F phenylalanine       3.9         26           1
 G glycine             7.4         49           4
 H histidine           2.6         17           1
 I isoleucine          3.9         26           2
 K lysine              4.8         32           2
 L leucine            13.3         88           2
 M methionine          2.4         16           1
 N asparagine          2.4         16           2
 P proline             6.2         41           4
 Q glutamine           5.0         33           2
 R arginine            6.0         40           2
 S serine              4.8         32           2
 T threonine           3.9         26           2
 V valine              7.1         47           2
 W tryptophan          2.6         17           1
 Y tyrosine            2.6         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arachidonate 15-lipoxygenase 
ALOX12                0.655   arachidonate 12-lipoxygenase 
ALOX5                 0.355   arachidonate 5-lipoxygenase 
ALOX15B               0.324   arachidonate 15-lipoxygenase, second type isoform d ...
ALOXE3                0.306   arachidonate lipoxygenase 3 
ALOX12B               0.298   arachidonate 12-lipoxygenase, 12R type 
ALOX15B               0.296   arachidonate 15-lipoxygenase, second type isoform a ...
ALOX15B               0.255   arachidonate 15-lipoxygenase, second type isoform b ...
LOXHD1                0.014   lipoxygenase homology domains 1 isoform 1 
LOXHD1                0.013   lipoxygenase homology domains 1 isoform 2 
LOC100293597          0.011   PREDICTED: similar to hCG2036697 
LOC100291435          0.011   PREDICTED: hypothetical protein XP_002347033 
LOC100287651          0.011   PREDICTED: hypothetical protein XP_002342894 
EP300                 0.004   E1A binding protein p300 
SATL1                 0.004   spermidine/spermine N1-acetyl transferase-like 1 [Ho...
RHOBTB2               0.004   Rho-related BTB domain containing 2 isoform 3 [Homo...
RHOBTB2               0.004   Rho-related BTB domain containing 2 isoform 2 [Homo...
RHOBTB2               0.004   Rho-related BTB domain containing 2 isoform 1 [Homo...
ALMS1                 0.004   Alstrom syndrome 1 
LOXHD1                0.004   lipoxygenase homology domains 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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