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Search of human proteins with 154090976
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154090976 sterile alpha and TIR motif containing 1 [Homo
sapiens]
(724 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154090976 sterile alpha and TIR motif containing 1 [Homo sapi... 1439 0.0
gi|29294627 PTPRF interacting protein binding protein 1 isoform ... 45 2e-04
gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens] 45 2e-04
gi|28557802 sterile alpha motif domain containing 14 [Homo sapiens] 45 3e-04
gi|7706091 bifunctional apoptosis regulator [Homo sapiens] 44 5e-04
gi|189571685 WD repeat, sterile alpha motif and U-box domain con... 44 5e-04
gi|189571683 WD repeat, sterile alpha motif and U-box domain con... 44 5e-04
gi|189571681 WD repeat, sterile alpha motif and U-box domain con... 44 5e-04
gi|157837985 kazrin isoform E [Homo sapiens] 43 0.001
gi|197927257 sterile alpha motif domain containing 13 isoform 2 ... 43 0.001
gi|197927255 sterile alpha motif domain containing 13 isoform 2 ... 43 0.001
gi|58293756 sterile alpha motif domain containing 13 isoform 1 [... 43 0.001
gi|41393057 connector enhancer of kinase suppressor of Ras 2 [Ho... 42 0.002
gi|82880648 MLK-related kinase isoform 1 [Homo sapiens] 42 0.003
gi|32699038 sterile alpha motif domain containing 7 [Homo sapiens] 40 0.008
gi|18079216 CASK interacting protein 1 [Homo sapiens] 39 0.013
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 39 0.017
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 39 0.017
gi|37595530 polyhomeotic-like 2 isoform b [Homo sapiens] 39 0.017
gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens] 39 0.017
gi|93204861 protein phosphatase 1, regulatory (inhibitor) subuni... 38 0.029
gi|50511945 cajalin 2 isoform a [Homo sapiens] 38 0.038
gi|170784854 PTPRF interacting protein, binding protein 2 (lipri... 37 0.049
gi|62953127 polyhomeotic 1-like [Homo sapiens] 37 0.049
gi|50511947 cajalin 2 isoform b [Homo sapiens] 37 0.049
gi|4504901 karyopherin alpha 4 [Homo sapiens] 37 0.049
gi|156119595 sterile alpha motif domain containing 12 isoform b ... 37 0.049
gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo ... 37 0.064
gi|239508715 PREDICTED: hypothetical protein [Homo sapiens] 37 0.064
gi|122937472 bicaudal C homolog 1 [Homo sapiens] 37 0.084
>gi|154090976 sterile alpha and TIR motif containing 1 [Homo
sapiens]
Length = 724
Score = 1439 bits (3725), Expect = 0.0
Identities = 724/724 (100%), Positives = 724/724 (100%)
Query: 1 MVLTLLLSAYKLCRFFAMSGPRPGAERLAVPGPDGGGGTGPWWAAGGRGPREVSPGAGTE 60
MVLTLLLSAYKLCRFFAMSGPRPGAERLAVPGPDGGGGTGPWWAAGGRGPREVSPGAGTE
Sbjct: 1 MVLTLLLSAYKLCRFFAMSGPRPGAERLAVPGPDGGGGTGPWWAAGGRGPREVSPGAGTE 60
Query: 61 VQDALERALPELQQALSALKQAGGARAVGAGLAEVFQLVEEAWLLPAVGREVAQGLCDAI 120
VQDALERALPELQQALSALKQAGGARAVGAGLAEVFQLVEEAWLLPAVGREVAQGLCDAI
Sbjct: 61 VQDALERALPELQQALSALKQAGGARAVGAGLAEVFQLVEEAWLLPAVGREVAQGLCDAI 120
Query: 121 RLDGGLDLLLRLLQAPELETRVQAARLLEQILVAENRDRVARIGLGVILNLAKEREPVEL 180
RLDGGLDLLLRLLQAPELETRVQAARLLEQILVAENRDRVARIGLGVILNLAKEREPVEL
Sbjct: 121 RLDGGLDLLLRLLQAPELETRVQAARLLEQILVAENRDRVARIGLGVILNLAKEREPVEL 180
Query: 181 ARSVAGILEHMFKHSEETCQRLVAAGGLDAVLYWCRRTDPALLRHCALALGNCALHGGQA 240
ARSVAGILEHMFKHSEETCQRLVAAGGLDAVLYWCRRTDPALLRHCALALGNCALHGGQA
Sbjct: 181 ARSVAGILEHMFKHSEETCQRLVAAGGLDAVLYWCRRTDPALLRHCALALGNCALHGGQA 240
Query: 241 VQRRMVEKRAAEWLFPLAFSKEDELLRLHACLAVAVLATNKEVEREVERSGTLALVEPLV 300
VQRRMVEKRAAEWLFPLAFSKEDELLRLHACLAVAVLATNKEVEREVERSGTLALVEPLV
Sbjct: 241 VQRRMVEKRAAEWLFPLAFSKEDELLRLHACLAVAVLATNKEVEREVERSGTLALVEPLV 300
Query: 301 ASLDPGRFARCLVDASDTSQGRGPDDLQRLVPLLDSNRLEAQCIGAFYLCAEAAIKSLQG 360
ASLDPGRFARCLVDASDTSQGRGPDDLQRLVPLLDSNRLEAQCIGAFYLCAEAAIKSLQG
Sbjct: 301 ASLDPGRFARCLVDASDTSQGRGPDDLQRLVPLLDSNRLEAQCIGAFYLCAEAAIKSLQG 360
Query: 361 KTKVFSDIGAIQSLKRLVSYSTNGTKSALAKRALRLLGEEVPRPILPSVPSWKEAEVQTW 420
KTKVFSDIGAIQSLKRLVSYSTNGTKSALAKRALRLLGEEVPRPILPSVPSWKEAEVQTW
Sbjct: 361 KTKVFSDIGAIQSLKRLVSYSTNGTKSALAKRALRLLGEEVPRPILPSVPSWKEAEVQTW 420
Query: 421 LQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFRELTELKTFANYS 480
LQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFRELTELKTFANYS
Sbjct: 421 LQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFRELTELKTFANYS 480
Query: 481 TCDRSNLADWLGSLDPRFRQYTYGLVSCGLDRSLLHRVSEQQLLEDCGIHLGVHRARILT 540
TCDRSNLADWLGSLDPRFRQYTYGLVSCGLDRSLLHRVSEQQLLEDCGIHLGVHRARILT
Sbjct: 481 TCDRSNLADWLGSLDPRFRQYTYGLVSCGLDRSLLHRVSEQQLLEDCGIHLGVHRARILT 540
Query: 541 AAREMLHSPLPCTGGKPSGDTPDVFISYRRNSGSQLASLLKVHLQLHGFSVFIDVEKLEA 600
AAREMLHSPLPCTGGKPSGDTPDVFISYRRNSGSQLASLLKVHLQLHGFSVFIDVEKLEA
Sbjct: 541 AAREMLHSPLPCTGGKPSGDTPDVFISYRRNSGSQLASLLKVHLQLHGFSVFIDVEKLEA 600
Query: 601 GKFEDKLIQSVMGARNFVLVLSPGALDKCMQDHDCKDWVHKEIVTALSCGKNIVPIIDGF 660
GKFEDKLIQSVMGARNFVLVLSPGALDKCMQDHDCKDWVHKEIVTALSCGKNIVPIIDGF
Sbjct: 601 GKFEDKLIQSVMGARNFVLVLSPGALDKCMQDHDCKDWVHKEIVTALSCGKNIVPIIDGF 660
Query: 661 EWPEPQVLPEDMQAVLTFNGIKWSHEYQEATIEKIIRFLQGRSSRDSSAGSDTSLEGAAP 720
EWPEPQVLPEDMQAVLTFNGIKWSHEYQEATIEKIIRFLQGRSSRDSSAGSDTSLEGAAP
Sbjct: 661 EWPEPQVLPEDMQAVLTFNGIKWSHEYQEATIEKIIRFLQGRSSRDSSAGSDTSLEGAAP 720
Query: 721 MGPT 724
MGPT
Sbjct: 721 MGPT 724
>gi|29294627 PTPRF interacting protein binding protein 1 isoform 1
[Homo sapiens]
Length = 1005
Score = 45.4 bits (106), Expect = 2e-04
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 12/133 (9%)
Query: 412 WKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFRELT 471
W + +V WL + G Y S + G LL+ ++++L+ +LG+K + RK+ L
Sbjct: 641 WTKEQVCNWLMEQGLGSYLNSGKHWIASGQTLLQASQQDLEKELGIKHSLHRKKLQLALQ 700
Query: 472 EL--KTFANYSTCDRSNLADWLGSLD-PRFR-QYTYGLVSCGLDRSLLHRVSEQQLLEDC 527
L + N+ D + + WL + P+++ Q+ G V D +LH ++ LL
Sbjct: 701 ALGSEEETNHGKLDFNWVTRWLDDIGLPQYKTQFDEGRV----DGRMLHYMTVDDLLSLK 756
Query: 528 GI----HLGVHRA 536
+ HL + RA
Sbjct: 757 VVSVLHHLSIKRA 769
>gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]
Length = 681
Score = 45.4 bits (106), Expect = 2e-04
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 394 LRLLGEEVPRPILPSVPSWKEAEVQTWLQQI-GFSKYCESFREQQVDGDLLLRLTEEELQ 452
L + GEE P P V W +V +++ + G +Y FREQ +DG+ L LTEE L
Sbjct: 527 LSMDGEEAPAP--EDVTKWTVDDVCSFVGGLSGCGEYTRVFREQGIDGETLPLLTEEHLL 584
Query: 453 TDLGMKSG 460
T++G+K G
Sbjct: 585 TNMGLKLG 592
>gi|28557802 sterile alpha motif domain containing 14 [Homo sapiens]
Length = 445
Score = 44.7 bits (104), Expect = 3e-04
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 406 LPSVPSWKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKR 465
LP V W +V WLQ + +Y F +QVDG LL+L +L++ LG+ + R
Sbjct: 348 LPPVHHWTSQQVGQWLQSLNLEQYAAEFAARQVDGPQLLQLDGSKLKS-LGLSNSHDRAL 406
Query: 466 FFRELTELKTFA 477
R+L E+ A
Sbjct: 407 VKRKLKEMAAAA 418
>gi|7706091 bifunctional apoptosis regulator [Homo sapiens]
Length = 450
Score = 43.9 bits (102), Expect = 5e-04
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 408 SVPSWKEAEVQTWLQQIG--FSKYCESFREQQVDGDLLLRLTEEEL-QTDLGMKSGITRK 464
+V W EV WL+Q+G S Y E F ++V+G LLL LTEEE +T +++ R+
Sbjct: 178 AVAKWTAEEVVLWLEQLGPWASLYRERFLSERVNGRLLLTLTEEEFSKTPYTIENSSHRR 237
Query: 465 RFFRELTELK 474
EL +K
Sbjct: 238 AILMELERVK 247
>gi|189571685 WD repeat, sterile alpha motif and U-box domain
containing 1 [Homo sapiens]
Length = 476
Score = 43.9 bits (102), Expect = 5e-04
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 412 WKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFRELT 471
W E +V TWL F+ +DG LL LT+E L DL ++S R + R++
Sbjct: 332 WSEEDVSTWLCAQDLKDLVGIFKMNNIDGKELLNLTKESLADDLKIESLGLRSKVLRKIE 391
Query: 472 ELKT 475
EL+T
Sbjct: 392 ELRT 395
>gi|189571683 WD repeat, sterile alpha motif and U-box domain
containing 1 [Homo sapiens]
Length = 476
Score = 43.9 bits (102), Expect = 5e-04
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 412 WKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFRELT 471
W E +V TWL F+ +DG LL LT+E L DL ++S R + R++
Sbjct: 332 WSEEDVSTWLCAQDLKDLVGIFKMNNIDGKELLNLTKESLADDLKIESLGLRSKVLRKIE 391
Query: 472 ELKT 475
EL+T
Sbjct: 392 ELRT 395
>gi|189571681 WD repeat, sterile alpha motif and U-box domain
containing 1 [Homo sapiens]
Length = 476
Score = 43.9 bits (102), Expect = 5e-04
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 412 WKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFRELT 471
W E +V TWL F+ +DG LL LT+E L DL ++S R + R++
Sbjct: 332 WSEEDVSTWLCAQDLKDLVGIFKMNNIDGKELLNLTKESLADDLKIESLGLRSKVLRKIE 391
Query: 472 ELKT 475
EL+T
Sbjct: 392 ELRT 395
>gi|157837985 kazrin isoform E [Homo sapiens]
Length = 775
Score = 42.7 bits (99), Expect = 0.001
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 412 WKEAEVQTWLQQI-GFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRF---- 466
WK VQ WL+ + Y ++ E G +LL L++E+LQ LG+ S + R++
Sbjct: 446 WKAGTVQAWLEVVMAMPMYVKACTENVKSGKVLLSLSDEDLQLGLGVCSSLHRRKLRLAI 505
Query: 467 --FRELTELKTFANYSTCDRSNLAD-WLGSLDPRFRQYTYGLVSCGLDRSLLHRVSEQQL 523
+R+ ++ + + D +A WL D QY+ + +D +L+ + ++ L
Sbjct: 506 EDYRDAEAGRSLSKAAELDHHWVAKAWLN--DIGLSQYSQAFQNHLVDGRMLNSLMKRDL 563
Query: 524 LEDCGIHLGVHRARIL 539
+ + H+ IL
Sbjct: 564 EKHLNVSKKFHQVSIL 579
Score = 40.0 bits (92), Expect = 0.008
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 20/173 (11%)
Query: 302 SLDPGRF----ARCLVDASDTSQGRGPDDLQRL--VPLLDSNRLEAQCIGAFYLCAEAAI 355
SLDPG F ++C S G + + RL V L+ + + G E +
Sbjct: 400 SLDPGLFDDSDSQCSPTRQSLSLSEGEEQMDRLQQVELVRTTPMSHWKAGTVQAWLEV-V 458
Query: 356 KSLQGKTKVFSDIGAIQSLKRLVSYSTN------GTKSALAKRALRLLGE-----EVPRP 404
++ K ++ ++S K L+S S G S+L +R LRL E E R
Sbjct: 459 MAMPMYVKACTE--NVKSGKVLLSLSDEDLQLGLGVCSSLHRRKLRLAIEDYRDAEAGRS 516
Query: 405 ILPSVPSWKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGM 457
+ + + WL IG S+Y ++F+ VDG +L L + +L+ L +
Sbjct: 517 LSKAAELDHHWVAKAWLNDIGLSQYSQAFQNHLVDGRMLNSLMKRDLEKHLNV 569
>gi|197927257 sterile alpha motif domain containing 13 isoform 2
[Homo sapiens]
Length = 102
Score = 42.7 bits (99), Expect = 0.001
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 407 PSVPSWKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRF 466
P W +V + + +GF + +F+EQ++DG LL +T ++ T L +K G K +
Sbjct: 26 PDPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIY 85
Query: 467 FRELTELKT 475
+ L+T
Sbjct: 86 EYHVKPLQT 94
>gi|197927255 sterile alpha motif domain containing 13 isoform 2
[Homo sapiens]
Length = 102
Score = 42.7 bits (99), Expect = 0.001
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 407 PSVPSWKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRF 466
P W +V + + +GF + +F+EQ++DG LL +T ++ T L +K G K +
Sbjct: 26 PDPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIY 85
Query: 467 FRELTELKT 475
+ L+T
Sbjct: 86 EYHVKPLQT 94
>gi|58293756 sterile alpha motif domain containing 13 isoform 1
[Homo sapiens]
Length = 116
Score = 42.7 bits (99), Expect = 0.001
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 407 PSVPSWKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRF 466
P W +V + + +GF + +F+EQ++DG LL +T ++ T L +K G K +
Sbjct: 40 PDPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIY 99
Query: 467 FRELTELKT 475
+ L+T
Sbjct: 100 EYHVKPLQT 108
>gi|41393057 connector enhancer of kinase suppressor of Ras 2 [Homo
sapiens]
Length = 1034
Score = 42.4 bits (98), Expect = 0.002
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 405 ILPSVPSWKEAEVQTWLQQIG--FSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGIT 462
I+ V W ++V W++ + +Y ++F +++ GD LLR+T +EL+ DLG+ S I
Sbjct: 4 IMEPVSKWSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRITHQELE-DLGV-SRIG 61
Query: 463 RKRFFRELTELKTFANY 479
+ E +L NY
Sbjct: 62 HQELILEAVDLLCALNY 78
>gi|82880648 MLK-related kinase isoform 1 [Homo sapiens]
Length = 800
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 17/113 (15%)
Query: 361 KTKVFSDIGAIQSLKRLVSYSTNGTKSALAKRALRL----LGEEVPRPILPS--VPSWKE 414
+ ++ + + ++ L+R +S+ K +R L++ L E+ P+LPS + +W E
Sbjct: 284 RCEIEATLERLKKLERDLSFKEQELKER--ERRLKMWEQKLTEQSNTPLLPSFEIGAWTE 341
Query: 415 AEVQTWLQQI--------GFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKS 459
+V W+QQ+ S Y F+E + G LL L EE+L+ D+G+ S
Sbjct: 342 DDVYCWVQQLVRKGDSSAEMSVYASLFKENNITGKRLLLLEEEDLK-DMGIVS 393
>gi|32699038 sterile alpha motif domain containing 7 [Homo sapiens]
Length = 446
Score = 40.0 bits (92), Expect = 0.008
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 17/77 (22%)
Query: 401 VPRPILPS----------------VPSWKEAEVQTWLQQI-GFSKYCESFREQQVDGDLL 443
VPRP LP + W +V ++++ + G S Y + F++ +DG+ L
Sbjct: 300 VPRPSLPGTHALVTIGGNLSLDEDIQKWTVDDVHSFIRSLPGCSDYAQVFKDHAIDGETL 359
Query: 444 LRLTEEELQTDLGMKSG 460
LTEE L+ +G+K G
Sbjct: 360 PLLTEEHLRGTMGLKLG 376
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 39.3 bits (90), Expect = 0.013
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 3/151 (1%)
Query: 395 RLLGEEVPRPILPSVPSWKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTD 454
++ GE+ P+ + P+ V WL Y +F D + R+T E+L T
Sbjct: 455 QVYGEQPPKKLEPASEGKSSEAVSQWLTAFQLQLYAPNFISAGYDLPTISRMTPEDL-TA 513
Query: 455 LGMKSGITRKRFFRELTELKTFANYSTCDRSNLADWLGSLDPRFRQYTYGLVSCGLDRSL 514
+G+ RK+ E++ L +NLA WL + QY LV G +
Sbjct: 514 IGVTKPGHRKKIAAEISGLSIPDWLPEHKPANLAVWLSMIG--LAQYYKVLVDNGYENID 571
Query: 515 LHRVSEQQLLEDCGIHLGVHRARILTAAREM 545
+ L++ GI H+ +++ A R++
Sbjct: 572 FITDITWEDLQEIGITKLGHQKKLMLAVRKL 602
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 38.9 bits (89), Expect = 0.017
Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 413 KEAE-VQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFRELT 471
K+A+ + WL + Y F + D + R+T E+L T +G+ RK+ E+
Sbjct: 407 KDAQAIHNWLSEFQLEGYTAHFLQAGYDVPTISRMTPEDL-TAIGVTKPGHRKKIASEIA 465
Query: 472 ELKTFANYSTCDRSNLADWLGSLDPRFRQYTYGLVSCGLDRSLLHRVSEQQLLEDCGIHL 531
+L + ++L +WL +L QY LVS G D L + L++ G++
Sbjct: 466 QLSIAEWLPSYIPTDLLEWLCALG--LPQYHKQLVSSGYDSMGLVADLTWEELQEIGVNK 523
Query: 532 GVHRARILTAAREM 545
H+ +++ + +
Sbjct: 524 LGHQKKLMLGVKRL 537
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 38.9 bits (89), Expect = 0.017
Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 413 KEAE-VQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFRELT 471
K+A+ + WL + Y F + D + R+T E+L T +G+ RK+ E+
Sbjct: 489 KDAQAIHNWLSEFQLEGYTAHFLQAGYDVPTISRMTPEDL-TAIGVTKPGHRKKIASEIA 547
Query: 472 ELKTFANYSTCDRSNLADWLGSLDPRFRQYTYGLVSCGLDRSLLHRVSEQQLLEDCGIHL 531
+L + ++L +WL +L QY LVS G D L + L++ G++
Sbjct: 548 QLSIAEWLPSYIPTDLLEWLCALG--LPQYHKQLVSSGYDSMGLVADLTWEELQEIGVNK 605
Query: 532 GVHRARILTAAREM 545
H+ +++ + +
Sbjct: 606 LGHQKKLMLGVKRL 619
>gi|37595530 polyhomeotic-like 2 isoform b [Homo sapiens]
Length = 323
Score = 38.9 bits (89), Expect = 0.017
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 406 LPSVPS-WKEAEVQTWLQQI-GFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITR 463
LPS P+ W +V +++ + G + E FR Q++DG LL L E+ L + + +K G
Sbjct: 252 LPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPAL 311
Query: 464 KRFFR 468
K + R
Sbjct: 312 KIYAR 316
>gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens]
Length = 858
Score = 38.9 bits (89), Expect = 0.017
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 406 LPSVPS-WKEAEVQTWLQQI-GFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITR 463
LPS P+ W +V +++ + G + E FR Q++DG LL L E+ L + + +K G
Sbjct: 787 LPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPAL 846
Query: 464 KRFFR 468
K + R
Sbjct: 847 KIYAR 851
>gi|93204861 protein phosphatase 1, regulatory (inhibitor) subunit 9A
[Homo sapiens]
Length = 1098
Score = 38.1 bits (87), Expect = 0.029
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 408 SVPSWKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFF 467
+V W +V WL + +Y F Q + G+ LL+L +L+ LGM + R
Sbjct: 984 AVQEWSVQQVSHWLMSLNLEQYVSEFSAQNITGEQLLQLDGNKLKA-LGMTASQDRAVVK 1042
Query: 468 RELTELK 474
++L E+K
Sbjct: 1043 KKLKEMK 1049
>gi|50511945 cajalin 2 isoform a [Homo sapiens]
Length = 1248
Score = 37.7 bits (86), Expect = 0.038
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 21/208 (10%)
Query: 394 LRLLGEEVPRPILPSVPSWKEAEVQTWLQQIGFSKYCESFREQQVDGDLLL--RLTEEEL 451
L+ + E RP P V WL+ IG +Y D + + E++
Sbjct: 798 LKEMNGETTRPRCPV------QTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQD 851
Query: 452 QTDLGMKSGITRKRFFRELTELKTFA--NYSTCDRSNLADWLGSLDPRFRQYTYGLVSCG 509
++G+ + R+R + + L + +++A+WL S++ YT + G
Sbjct: 852 LLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLDSIE--LGDYTKAFLING 909
Query: 510 L-DRSLLHRVSEQQLLEDCGIHLGVHRARILTAAREMLHS------PLPCTGGKPSGD-- 560
LL ++ E +L+ I+L HR RIL + + LH P T +PSG+
Sbjct: 910 YTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQKPPRSITLREPSGNHT 969
Query: 561 TPDVFISYRRNSGSQLASLLKVHLQLHG 588
P + S +++ + SL H+ + G
Sbjct: 970 PPQLSPSLSQSTYTTGGSLDVPHIIMQG 997
>gi|170784854 PTPRF interacting protein, binding protein 2 (liprin
beta 2) [Homo sapiens]
Length = 876
Score = 37.4 bits (85), Expect = 0.049
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 412 WKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFRELT 471
W V WL+ G ++Y R+ G LL T ++++ +LG+K + RK+ +
Sbjct: 558 WSTERVCAWLEDFGLAQYVIFARQWVSSGHTLLTATPQDMEKELGIKHPLHRKKLVLAVK 617
Query: 472 ELKT 475
+ T
Sbjct: 618 AINT 621
Score = 33.1 bits (74), Expect = 0.93
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 417 VQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEEL 451
V WL IG +Y + F E +VDG +L LT +L
Sbjct: 635 VTRWLDDIGLPQYKDQFHESRVDGRMLQYLTVNDL 669
>gi|62953127 polyhomeotic 1-like [Homo sapiens]
Length = 1004
Score = 37.4 bits (85), Expect = 0.049
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 406 LPSVPS-WKEAEVQTWLQQI-GFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSG 460
L S PS W EV ++ + G + E FR Q++DG LL L EE L + + +K G
Sbjct: 933 LSSNPSRWSVEEVYEFIASLQGCQEIAEEFRSQEIDGQALLLLKEEHLMSAMNIKLG 989
>gi|50511947 cajalin 2 isoform b [Homo sapiens]
Length = 510
Score = 37.4 bits (85), Expect = 0.049
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 15/185 (8%)
Query: 417 VQTWLQQIGFSKYCESFREQQVDGDLLL--RLTEEELQTDLGMKSGITRKRFFRELTELK 474
V WL+ IG +Y D + + E++ ++G+ + R+R + + L
Sbjct: 41 VGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLP 100
Query: 475 TFA--NYSTCDRSNLADWLGSLDPRFRQYTYGLVSCGL-DRSLLHRVSEQQLLEDCGIHL 531
+ +++A+WL S++ YT + G LL ++ E +L+ I+L
Sbjct: 101 KMRPIGHDGYHPTSVAEWLDSIE--LGDYTKAFLINGYTSMDLLKKIWEVELINVLKINL 158
Query: 532 GVHRARILTAAREMLHS------PLPCTGGKPSGD--TPDVFISYRRNSGSQLASLLKVH 583
HR RIL + + LH P T +PSG+ P + S +++ + SL H
Sbjct: 159 IGHRKRILASLGDRLHDDPPQKPPRSITLREPSGNHTPPQLSPSLSQSTYTTGGSLDVPH 218
Query: 584 LQLHG 588
+ + G
Sbjct: 219 IIMQG 223
>gi|4504901 karyopherin alpha 4 [Homo sapiens]
Length = 521
Score = 37.4 bits (85), Expect = 0.049
Identities = 46/196 (23%), Positives = 80/196 (40%), Gaps = 16/196 (8%)
Query: 100 EEAWLLPAVGREVAQGLCDAIRLDGGLDLLLRLLQAPELETRVQAARLLEQILVAENRDR 159
E AW L + ++ A+ + L LRLL +P QA L I+ + R
Sbjct: 134 EAAWALTNIASGTSEQT-QAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCR 192
Query: 160 VARIGLGVI---LNLAKEREPVELARSVAGILEHMFKHSE-----ETCQRLVAAGGLDAV 211
I LGV+ L+ P+ R+V ++ ++ +H + ET Q + L A+
Sbjct: 193 DYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEI-----LPAL 247
Query: 212 LYWCRRTDPALLRHCALALGNCALHGGQAVQRRMVEKRAAEWLFPLAFSKEDELLRLHAC 271
TD +L AL G + +Q +++ L PL S ++ ++ A
Sbjct: 248 CVLIHHTDVNILVDTVWALSYLTDAGNEQIQ-MVIDSGIVPHLVPL-LSHQEVKVQTAAL 305
Query: 272 LAVAVLATNKEVEREV 287
AV + T + + +V
Sbjct: 306 RAVGNIVTGTDEQTQV 321
>gi|156119595 sterile alpha motif domain containing 12 isoform b
[Homo sapiens]
Length = 201
Score = 37.4 bits (85), Expect = 0.049
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 409 VPSWKEAEVQTWLQQI---GFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKR 465
V W + +V WL++ + Y ESF++ + G LLRLT+++L+ +G+ R+
Sbjct: 74 VALWTQQDVCKWLKKHCPNQYQIYSESFKQHDITGRALLRLTDKKLER-MGIAQENLRQH 132
Query: 466 FFRELTELKT---FANYSTCDRSNLADWLGSLDPRFRQYTYGLV-SCGLDRSL---LHRV 518
+++ +LK N + L G +D R+ T L+ G+ +L LHR+
Sbjct: 133 ILQQVLQLKVREEVRNLQLLTQGTLLLPDGWMDGEIRRKTTLLLGQTGVRENLLLFLHRI 192
Query: 519 S 519
S
Sbjct: 193 S 193
>gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo
sapiens]
Length = 231
Score = 37.0 bits (84), Expect = 0.064
Identities = 25/66 (37%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 31 PGPDGGGGTG---PWWAAGGRGPREVSPGAGTEVQDALERALPELQQALSALKQAGGARA 87
PG GGGG G WAAG R RE GA RA P + ++ GG
Sbjct: 82 PGGSGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGG 141
Query: 88 VGAGLA 93
GAG A
Sbjct: 142 RGAGRA 147
>gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 37.0 bits (84), Expect = 0.064
Identities = 25/66 (37%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 31 PGPDGGGGTG---PWWAAGGRGPREVSPGAGTEVQDALERALPELQQALSALKQAGGARA 87
PG GGGG G WAAG R RE GA RA P + ++ GG
Sbjct: 82 PGGSGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGG 141
Query: 88 VGAGLA 93
GAG A
Sbjct: 142 RGAGRA 147
>gi|122937472 bicaudal C homolog 1 [Homo sapiens]
Length = 974
Score = 36.6 bits (83), Expect = 0.084
Identities = 17/63 (26%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 411 SWKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFREL 470
S+K +++ ++G KY + F++Q++D L LT+++L+ +LG+ + R++ +
Sbjct: 872 SFKGSDLPELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLK-ELGITTFGARRKMLLAI 930
Query: 471 TEL 473
+EL
Sbjct: 931 SEL 933
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,510,582
Number of Sequences: 37866
Number of extensions: 1367262
Number of successful extensions: 5212
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 5108
Number of HSP's gapped (non-prelim): 150
length of query: 724
length of database: 18,247,518
effective HSP length: 110
effective length of query: 614
effective length of database: 14,082,258
effective search space: 8646506412
effective search space used: 8646506412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.