Guide to the Human Genome
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Name: ITPR3 Sequence: fasta or formatted (2671aa) NCBI GI: 153945846
Description:

inositol 1,4,5-triphosphate receptor, type 3

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7        152           4
 C cysteine            1.9         51           1
 D aspartate           5.5        146           2
 E glutamate           7.5        199           4
 F phenylalanine       4.3        114           3
 G glycine             5.0        134           3
 H histidine           2.9         78           2
 I isoleucine          5.5        148           3
 K lysine              6.2        166           2
 L leucine            11.9        318           3
 M methionine          3.1         84           2
 N asparagine          5.0        134           2
 P proline             3.3         88           2
 Q glutamine           4.8        127           3
 R arginine            5.1        137           2
 S serine              6.7        179           3
 T threonine           5.0        133           3
 V valine              6.9        185           3
 W tryptophan          0.8         22           1
 Y tyrosine            2.8         76           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inositol 1,4,5-triphosphate receptor, type 3 
ITPR2                 0.641   inositol 1,4,5-triphosphate receptor, type 2 
ITPR1                 0.615   inositol 1,4,5-triphosphate receptor, type 1 isofor...
ITPR1                 0.614   inositol 1,4,5-triphosphate receptor, type 1 isofor...
RYR2                  0.026   cardiac muscle ryanodine receptor 
RYR1                  0.026   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.026   skeletal muscle ryanodine receptor isoform 1 
RYR3                  0.026   ryanodine receptor 3 
CGNL1                 0.003   cingulin-like 1 
SLMAP                 0.002   sarcolemma associated protein 
ARHGAP4               0.002   Rho GTPase activating protein 4 
CACNA1B               0.002   calcium channel, voltage-dependent, N type, alpha 1B ...
GOLGA4                0.002   golgi autoantigen, golgin subfamily a, 4 
PHLDB3                0.002   pleckstrin homology-like domain, family B, member 3...
GOLGB1                0.002   golgi autoantigen, golgin subfamily b, macrogolgin ...
GCC2                  0.002   GRIP and coiled-coil domain-containing 2 
CCDC68                0.002   coiled-coil domain containing 68 
CCDC68                0.002   coiled-coil domain containing 68 
VIM                   0.002   vimentin 
KIF5B                 0.002   kinesin family member 5B 
TPR                   0.002   nuclear pore complex-associated protein TPR 
FGFR1OP2              0.002   FGFR1 oncogene partner 2 
WDR87                 0.002   NYD-SP11 protein 
C10orf68              0.002   chromosome 10 open reading frame 68 
ROCK1                 0.002   Rho-associated, coiled-coil containing protein kinase...
EPS15                 0.002   epidermal growth factor receptor pathway substrate 15...
HYOU1                 0.002   hypoxia up-regulated 1 precursor 
HYOU1                 0.002   hypoxia up-regulated 1 precursor 
WDHD1                 0.002   WD repeat and HMG-box DNA binding protein 1 isoform ...
WDHD1                 0.002   WD repeat and HMG-box DNA binding protein 1 isoform 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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