Guide to the Human Genome
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Name: HYOU1 Sequence: fasta or formatted (999aa) NCBI GI: 195976805
Description:

hypoxia up-regulated 1 precursor

Referenced in:

Heat-Shock Proteins and Chaperonins

Other entries for this name:
alt mRNA [999aa] hypoxia up-regulated 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         88           3
 C cysteine            0.4          4           1
 D aspartate           5.2         52           2
 E glutamate          11.4        114           4
 F phenylalanine       3.7         37           2
 G glycine             6.2         62           3
 H histidine           1.1         11           1
 I isoleucine          3.1         31           1
 K lysine              7.7         77           2
 L leucine             9.8         98           2
 M methionine          2.5         25           2
 N asparagine          3.4         34           1
 P proline             5.9         59           4
 Q glutamine           5.1         51           2
 R arginine            5.7         57           3
 S serine              5.2         52           2
 T threonine           5.1         51           2
 V valine              7.5         75           2
 W tryptophan          0.5          5           1
 Y tyrosine            1.6         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypoxia up-regulated 1 precursor 
HYOU1                 1.000   hypoxia up-regulated 1 precursor 
HSPA4                 0.150   heat shock 70kDa protein 4 
HSPH1                 0.150   heat shock 105kD 
HSPA4L                0.145   heat shock 70kDa protein 4-like 
HSPA6                 0.106   heat shock 70kDa protein 6 (HSP70B') 
HSPA8                 0.105   heat shock 70kDa protein 8 isoform 1 
HSPA8                 0.102   heat shock 70kDa protein 8 isoform 2 
HSPA1B                0.102   heat shock 70kDa protein 1B 
HSPA1A                0.102   heat shock 70kDa protein 1A 
HSPA1L                0.101   heat shock 70kDa protein 1-like 
HSPA2                 0.098   heat shock 70kDa protein 2 
HSPA5                 0.094   heat shock 70kDa protein 5 
HSPA9                 0.074   heat shock 70kDa protein 9 precursor 
HSPA14                0.067   heat shock 70kDa protein 14 isoform 1 
HSPA13                0.058   heat shock protein 70kDa family member 13 precursor ...
NEFH                  0.018   neurofilament, heavy polypeptide 200kDa 
RP1L1                 0.015   retinitis pigmentosa 1-like 1 
PDCD11                0.015   programmed cell death 11 
NEFM                  0.013   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.013   neurofilament, medium polypeptide 150kDa isoform 2 ...
FSCB                  0.013   fibrous sheath CABYR binding protein 
MKI67                 0.012   antigen identified by monoclonal antibody Ki-67 iso...
MKI67                 0.012   antigen identified by monoclonal antibody Ki-67 iso...
C20orf151             0.011   hypothetical protein LOC140893 
HMGN3                 0.011   high mobility group nucleosomal binding domain 3 iso...
OGFR                  0.011   opioid growth factor receptor 
C14orf174             0.011   hypothetical protein LOC161394 
C9orf86               0.011   Rab-like GTP-binding protein 1 isoform 1 
HNRNPU                0.011   heterogeneous nuclear ribonucleoprotein U isoform b ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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