Guide to the Human Genome
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Name: ITPR2 Sequence: fasta or formatted (2701aa) NCBI GI: 95147335
Description:

inositol 1,4,5-triphosphate receptor, type 2

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3        144           2
 C cysteine            2.1         56           1
 D aspartate           5.6        152           3
 E glutamate           7.3        197           2
 F phenylalanine       4.4        119           3
 G glycine             5.0        136           3
 H histidine           2.7         73           2
 I isoleucine          6.1        166           3
 K lysine              6.3        170           3
 L leucine            11.0        296           3
 M methionine          3.1         83           2
 N asparagine          5.8        156           2
 P proline             3.6         97           2
 Q glutamine           4.3        117           2
 R arginine            5.1        137           2
 S serine              6.3        169           2
 T threonine           5.2        140           3
 V valine              6.9        186           2
 W tryptophan          0.8         21           1
 Y tyrosine            3.2         86           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inositol 1,4,5-triphosphate receptor, type 2 
ITPR1                 0.684   inositol 1,4,5-triphosphate receptor, type 1 isofor...
ITPR1                 0.683   inositol 1,4,5-triphosphate receptor, type 1 isofor...
ITPR3                 0.630   inositol 1,4,5-triphosphate receptor, type 3 
RYR1                  0.026   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.026   skeletal muscle ryanodine receptor isoform 1 
RYR3                  0.026   ryanodine receptor 3 
RYR2                  0.026   cardiac muscle ryanodine receptor 
GOLGA4                0.002   golgi autoantigen, golgin subfamily a, 4 
RABEP1                0.002   rabaptin, RAB GTPase binding effector protein 1 iso...
RABEP1                0.002   rabaptin, RAB GTPase binding effector protein 1 isof...
LRBA                  0.001   LPS-responsive vesicle trafficking, beach and ancho...
CCDC67                0.001   coiled-coil domain containing 67 
C6orf70               0.001   hypothetical protein LOC55780 
USP16                 0.001   ubiquitin specific protease 16 isoform b 
USP16                 0.001   ubiquitin specific protease 16 isoform a 
USP16                 0.001   ubiquitin specific protease 16 isoform a 
TRRAP                 0.001   transformation/transcription domain-associated protei...
C10orf118             0.001   CTCL tumor antigen L14-2 
VARS                  0.001   valyl-tRNA synthetase 
CCDC77                0.001   coiled-coil domain containing 77 isoform b 
CCDC77                0.001   coiled-coil domain containing 77 isoform b 
CCDC77                0.001   coiled-coil domain containing 77 isoform a 
CCDC77                0.001   coiled-coil domain containing 77 isoform b 
PLEKHH1               0.001   pleckstrin homology domain containing, family H (wit...
LOC643677             0.001   hypothetical protein LOC643677 
LOC643677             0.001   PREDICTED: hypothetical protein LOC643677 
LOC643677             0.001   PREDICTED: hypothetical protein LOC643677 
SMC2                  0.001   structural maintenance of chromosomes 2 
SMC2                  0.001   structural maintenance of chromosomes 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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