Guide to the Human Genome
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Name: ITPR1 Sequence: fasta or formatted (2710aa) NCBI GI: 154354998
Description:

inositol 1,4,5-triphosphate receptor, type 1 isoform 1

Referenced in:

Cyclic Nucleotides

Other entries for this name:
alt prot [2695aa] inositol 1,4,5-triphosphate receptor, type 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4        147           3
 C cysteine            2.2         60           1
 D aspartate           5.5        150           2
 E glutamate           8.1        220           3
 F phenylalanine       4.6        124           3
 G glycine             5.3        143           6
 H histidine           2.6         71           2
 I isoleucine          5.5        150           3
 K lysine              6.1        166           3
 L leucine            11.2        304           3
 M methionine          2.6         71           2
 N asparagine          5.3        143           2
 P proline             3.4         93           2
 Q glutamine           4.6        125           3
 R arginine            5.6        153           2
 S serine              6.6        178           3
 T threonine           4.8        130           2
 V valine              7.0        191           2
 W tryptophan          0.8         21           1
 Y tyrosine            2.6         70           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inositol 1,4,5-triphosphate receptor, type 1 isofor... 
ITPR1                 0.992   inositol 1,4,5-triphosphate receptor, type 1 isofor...
ITPR2                 0.684   inositol 1,4,5-triphosphate receptor, type 2 
ITPR3                 0.604   inositol 1,4,5-triphosphate receptor, type 3 
RYR1                  0.026   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.026   skeletal muscle ryanodine receptor isoform 1 
RYR3                  0.026   ryanodine receptor 3 
RYR2                  0.025   cardiac muscle ryanodine receptor 
CENPE                 0.003   centromere protein E 
KIF3C                 0.002   kinesin family member 3C 
MAF                   0.002   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.002   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
CLINT1                0.002   epsin 4 
DAZAP1                0.002   DAZ associated protein 1 isoform b 
PDE4DIP               0.002   phosphodiesterase 4D interacting protein isoform 2 [...
PDE4DIP               0.002   phosphodiesterase 4D interacting protein isoform 1 ...
CATSPER3              0.002   cation channel, sperm associated 3 
ZC3H18                0.002   zinc finger CCCH-type containing 18 
PCDH7                 0.002   protocadherin 7 isoform b precursor 
PCDH7                 0.002   protocadherin 7 isoform a precursor 
PBX2                  0.002   pre-B-cell leukemia homeobox 2 
LRSAM1                0.002   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.002   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.002   leucine rich repeat and sterile alpha motif containi...
ZSWIM6                0.002   zinc finger, SWIM-type containing 6 
FEZF2                 0.002   FEZ family zinc finger 2 
NEFH                  0.002   neurofilament, heavy polypeptide 200kDa 
MAD1L1                0.002   MAD1-like 1 protein 
MAD1L1                0.002   MAD1-like 1 protein 
MAD1L1                0.002   MAD1-like 1 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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