Guide to the Human Genome
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Name: BRWD1 Sequence: fasta or formatted (120aa) NCBI GI: 55956930
Description:

bromodomain and WD repeat domain containing 1 isoform C

Referenced in:

Bromodomain Family
WD Repeat Proteins

Other entries for this name:
alt prot [2320aa] bromodomain and WD repeat domain containing 1 isoform A
alt prot [2269aa] bromodomain and WD repeat domain containing 1 isoform B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5          9           2
 C cysteine            1.7          2           1
 D aspartate           2.5          3           1
 E glutamate           8.3         10           2
 F phenylalanine       0.8          1           1
 G glycine             5.0          6           1
 H histidine           2.5          3           1
 I isoleucine          5.8          7           1
 K lysine              3.3          4           1
 L leucine            15.8         19           2
 M methionine          1.7          2           1
 N asparagine          2.5          3           1
 P proline             7.5          9           2
 Q glutamine           5.8          7           1
 R arginine            9.2         11           2
 S serine              8.3         10           2
 T threonine           2.5          3           1
 V valine              5.0          6           1
 W tryptophan          0.8          1           1
 Y tyrosine            3.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bromodomain and WD repeat domain containing 1 isofor... 
BRWD1                 0.967   bromodomain and WD repeat domain containing 1 isofor...
BRWD1                 0.967   bromodomain and WD repeat domain containing 1 isofor...
BRWD3                 0.607   bromodomain and WD repeat domain containing 3 [Homo...
PHIP                  0.537   pleckstrin homology domain interacting protein [Homo...
HELZ                  0.014   helicase with zinc finger domain 
POU2F1                0.014   POU class 2 homeobox 1 
BAT2L                 0.009   HLA-B associated transcript 2-like 
ANGPT2                0.005   angiopoietin 2 isoform c precursor 
ANGPT2                0.005   angiopoietin 2 isoform b precursor 
ANGPT2                0.005   angiopoietin 2 isoform a precursor 
ANGPT1                0.005   angiopoietin 1 
SRPR                  0.005   signal recognition particle receptor 
WDR87                 0.005   NYD-SP11 protein 
NPFFR2                0.005   neuropeptide FF receptor 2 isoform 2 
NPFFR2                0.005   neuropeptide FF receptor 2 isoform 1 
NPFFR2                0.005   neuropeptide FF receptor 2 isoform 3 
EVPL                  0.005   envoplakin 
C6orf182              0.005   hypothetical protein LOC285753 
C6orf182              0.005   hypothetical protein LOC285753 
CCDC147               0.005   coiled-coil domain containing 147 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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