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Search of human proteins with 15150811
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15150811 mitochondrial ribosomal protein S36 [Homo sapiens]
(103 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15150811 mitochondrial ribosomal protein S36 [Homo sapiens] 207 1e-54
gi|31563338 forkhead box K2 [Homo sapiens] 33 0.063
gi|31415870 dedicator of cytokinesis 3 [Homo sapiens] 29 0.70
gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens] 29 0.70
gi|21493031 A-kinase anchor protein 13 isoform 3 [Homo sapiens] 29 0.70
gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens] 29 0.70
gi|20336196 A-kinase anchor protein 7 isoform beta [Homo sapiens] 28 1.2
gi|221139926 NHS-like 1 [Homo sapiens] 28 1.6
gi|38505290 voltage-dependent calcium channel alpha 1G subunit i... 28 2.0
gi|38505288 voltage-dependent calcium channel alpha 1G subunit i... 28 2.0
gi|38505286 voltage-dependent calcium channel alpha 1G subunit i... 28 2.0
gi|38505282 voltage-dependent calcium channel alpha 1G subunit i... 28 2.0
gi|38505278 voltage-dependent calcium channel alpha 1G subunit i... 28 2.0
gi|38505272 voltage-dependent calcium channel alpha 1G subunit i... 28 2.0
gi|38505268 voltage-dependent calcium channel alpha 1G subunit i... 28 2.0
gi|162287219 prune homolog 2 [Homo sapiens] 27 3.5
gi|14150084 nicolin 1 [Homo sapiens] 27 3.5
gi|38348336 inter-alpha (globulin) inhibitor H5-like [Homo sapiens] 27 4.5
gi|110815809 zinc finger, RAN-binding domain containing 1 protei... 27 4.5
gi|190343010 SP110 nuclear body protein isoform a [Homo sapiens] 27 4.5
gi|190343008 SP110 nuclear body protein isoform b [Homo sapiens] 27 4.5
gi|190343006 SP110 nuclear body protein isoform c [Homo sapiens] 27 4.5
gi|47578107 delangin isoform B [Homo sapiens] 27 4.5
gi|47578105 delangin isoform A [Homo sapiens] 27 4.5
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 27 4.5
gi|239756935 PREDICTED: hypothetical protein XP_002345110 [Homo ... 26 5.9
gi|239751447 PREDICTED: hypothetical protein XP_002347851 [Homo ... 26 5.9
gi|239745952 PREDICTED: hypothetical protein XP_002343584 [Homo ... 26 5.9
gi|119943106 synapse-associated protein 102 isoform a [Homo sapi... 26 5.9
gi|13129074 proline rich Gla (G-carboxyglutamic acid) 4 (transme... 26 5.9
>gi|15150811 mitochondrial ribosomal protein S36 [Homo sapiens]
Length = 103
Score = 207 bits (527), Expect = 1e-54
Identities = 103/103 (100%), Positives = 103/103 (100%)
Query: 1 MMGSKMASASRVVQVVKPHTPLIRFPDRRDNPKPNVSEALRSAGLPSHSSVISQHSKGSK 60
MMGSKMASASRVVQVVKPHTPLIRFPDRRDNPKPNVSEALRSAGLPSHSSVISQHSKGSK
Sbjct: 1 MMGSKMASASRVVQVVKPHTPLIRFPDRRDNPKPNVSEALRSAGLPSHSSVISQHSKGSK 60
Query: 61 SPDLLMYQGPPDTAEIIKTLPQKYRRKLVSQEEMEFIQRGGPE 103
SPDLLMYQGPPDTAEIIKTLPQKYRRKLVSQEEMEFIQRGGPE
Sbjct: 61 SPDLLMYQGPPDTAEIIKTLPQKYRRKLVSQEEMEFIQRGGPE 103
>gi|31563338 forkhead box K2 [Homo sapiens]
Length = 660
Score = 32.7 bits (73), Expect = 0.063
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 46 PSHSSVISQHSKGSKSPDLLMYQGPPDTAEIIKTLPQKYRRKLVSQEEMEFIQ 98
P+H+ V+S HS G+++P+ L +G P E P + KL +E F Q
Sbjct: 374 PNHAGVLSAHSSGAQTPESLSREGSPAPLE---PEPGAAQPKLAVIQEARFAQ 423
>gi|31415870 dedicator of cytokinesis 3 [Homo sapiens]
Length = 2030
Score = 29.3 bits (64), Expect = 0.70
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 19 HTPLIRFPDRR-DNPKPNVSEALRSAGLPSHSSVISQHSKGSKSPDLLMYQGPPDTAEII 77
H + +P+ R NVS S PS SS+ S HS S+ M P +A
Sbjct: 1712 HHMQLAYPNPRYQGSVTNVSVLSSSQASPSSSSLSSTHSAPSQ-----MITSAPSSARGS 1766
Query: 78 KTLPQKYR 85
+LP KYR
Sbjct: 1767 PSLPDKYR 1774
>gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens]
Length = 2817
Score = 29.3 bits (64), Expect = 0.70
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 14 QVVKPHTPLIR----FPDRRDNPKPNVSEALRSAGLPSHSSVISQHSKGSKS 61
QV PHT L+R FP + P P+ +S L S SV + + S++
Sbjct: 2690 QVSHPHTKLMRIPSFFPSPEEPPSPSAPSIAKSGSLDSELSVSPKRNSISRT 2741
>gi|21493031 A-kinase anchor protein 13 isoform 3 [Homo sapiens]
Length = 1058
Score = 29.3 bits (64), Expect = 0.70
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 14 QVVKPHTPLIR----FPDRRDNPKPNVSEALRSAGLPSHSSVISQHSKGSKS 61
QV PHT L+R FP + P P+ +S L S SV + + S++
Sbjct: 931 QVSHPHTKLMRIPSFFPSPEEPPSPSAPSIAKSGSLDSELSVSPKRNSISRT 982
>gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens]
Length = 2813
Score = 29.3 bits (64), Expect = 0.70
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 14 QVVKPHTPLIR----FPDRRDNPKPNVSEALRSAGLPSHSSVISQHSKGSKS 61
QV PHT L+R FP + P P+ +S L S SV + + S++
Sbjct: 2686 QVSHPHTKLMRIPSFFPSPEEPPSPSAPSIAKSGSLDSELSVSPKRNSISRT 2737
>gi|20336196 A-kinase anchor protein 7 isoform beta [Homo sapiens]
Length = 104
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 25 FPDRRDNPKPNVSEALRSAGLPSHSSVISQHSKGSKSPDLLMYQGPPDTAEIIKTLPQKY 84
FP RD K + E+ SA L +S I S G K+ G PD AE++ +
Sbjct: 7 FPFSRDEGKISELESSSSAVLQRYSKDIPSWSSGEKN------GGEPDDAELV-----RL 55
Query: 85 RRKLVSQEEMEFIQR 99
++LV ++ +Q+
Sbjct: 56 SKRLVENAVLKAVQQ 70
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 28.1 bits (61), Expect = 1.6
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 17 KPHTPLIRFPDRRD---NPKPNVSEALRSAGLPSHSSVISQHSKGSK 60
KP L+ P ++D P NVSEALR+ P+ S HS+ +K
Sbjct: 1198 KPKLFLVVPPPQKDFAVEPAENVSEALRAVPSPTTGEEGSVHSREAK 1244
>gi|38505290 voltage-dependent calcium channel alpha 1G subunit
isoform 13 [Homo sapiens]
Length = 2243
Score = 27.7 bits (60), Expect = 2.0
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 17 KPHTPL--------IRFPDRRDNPKPNVSEALRSAGLPSHSSV----ISQHSKGSKSPDL 64
+PH+PL + PD D+PKP A SH S+ + H PDL
Sbjct: 1840 QPHSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDL 1899
Query: 65 L 65
L
Sbjct: 1900 L 1900
>gi|38505288 voltage-dependent calcium channel alpha 1G subunit
isoform 12 [Homo sapiens]
Length = 2250
Score = 27.7 bits (60), Expect = 2.0
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 17 KPHTPL--------IRFPDRRDNPKPNVSEALRSAGLPSHSSV----ISQHSKGSKSPDL 64
+PH+PL + PD D+PKP A SH S+ + H PDL
Sbjct: 1847 QPHSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDL 1906
Query: 65 L 65
L
Sbjct: 1907 L 1907
>gi|38505286 voltage-dependent calcium channel alpha 1G subunit
isoform 10 [Homo sapiens]
Length = 2266
Score = 27.7 bits (60), Expect = 2.0
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 17 KPHTPL--------IRFPDRRDNPKPNVSEALRSAGLPSHSSV----ISQHSKGSKSPDL 64
+PH+PL + PD D+PKP A SH S+ + H PDL
Sbjct: 1863 QPHSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDL 1922
Query: 65 L 65
L
Sbjct: 1923 L 1923
>gi|38505282 voltage-dependent calcium channel alpha 1G subunit
isoform 8 [Homo sapiens]
Length = 2284
Score = 27.7 bits (60), Expect = 2.0
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 17 KPHTPL--------IRFPDRRDNPKPNVSEALRSAGLPSHSSV----ISQHSKGSKSPDL 64
+PH+PL + PD D+PKP A SH S+ + H PDL
Sbjct: 1881 QPHSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDL 1940
Query: 65 L 65
L
Sbjct: 1941 L 1941
>gi|38505278 voltage-dependent calcium channel alpha 1G subunit
isoform 11 [Homo sapiens]
Length = 2261
Score = 27.7 bits (60), Expect = 2.0
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 17 KPHTPL--------IRFPDRRDNPKPNVSEALRSAGLPSHSSV----ISQHSKGSKSPDL 64
+PH+PL + PD D+PKP A SH S+ + H PDL
Sbjct: 1858 QPHSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDL 1917
Query: 65 L 65
L
Sbjct: 1918 L 1918
>gi|38505272 voltage-dependent calcium channel alpha 1G subunit
isoform 9 [Homo sapiens]
Length = 2273
Score = 27.7 bits (60), Expect = 2.0
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 17 KPHTPL--------IRFPDRRDNPKPNVSEALRSAGLPSHSSV----ISQHSKGSKSPDL 64
+PH+PL + PD D+PKP A SH S+ + H PDL
Sbjct: 1870 QPHSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDL 1929
Query: 65 L 65
L
Sbjct: 1930 L 1930
>gi|38505268 voltage-dependent calcium channel alpha 1G subunit
isoform 14 [Homo sapiens]
Length = 2171
Score = 27.7 bits (60), Expect = 2.0
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 17 KPHTPL--------IRFPDRRDNPKPNVSEALRSAGLPSHSSV----ISQHSKGSKSPDL 64
+PH+PL + PD D+PKP A SH S+ + H PDL
Sbjct: 1847 QPHSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDL 1906
Query: 65 L 65
L
Sbjct: 1907 L 1907
>gi|162287219 prune homolog 2 [Homo sapiens]
Length = 3088
Score = 26.9 bits (58), Expect = 3.5
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 33 KPNVSEALRSAGLPSHSSVISQHSKGSKSPDLLMYQGPPDTAEIIKTLPQKYRRKLV--- 89
KP S AL A P S S+ S+G PD + Q E PQ ++ ++
Sbjct: 2681 KPLESLALEEASGPVSQSQKSK-SRGRAGPDAVTLQAVTHDNEWEMLSPQPVQKNMIPDT 2739
Query: 90 -SQEEMEFIQRG 100
+EE EF++ G
Sbjct: 2740 EMEEETEFLELG 2751
>gi|14150084 nicolin 1 [Homo sapiens]
Length = 213
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 18 PHTPLIRFPDRRDNPKPNVSEALRSAGLPSHSSVISQ 54
P +P + FP +P P AL GLP S V S+
Sbjct: 140 PKSPSVTFPKWLSHPVPCEQPALLREGLPDPSRVSSE 176
>gi|38348336 inter-alpha (globulin) inhibitor H5-like [Homo sapiens]
Length = 1313
Score = 26.6 bits (57), Expect = 4.5
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 6/64 (9%)
Query: 18 PHTPLIRFPDRRDNPKPNVSEALRSAGLPSHSSVISQHSKGSKSPDLLMYQGPPDTAEII 77
PH P P R D P+P + E+L + P+ S S G S G P
Sbjct: 879 PHMPQTPLPPRPDRPRPPLPESLST--FPNTIS----SSTGPSSTTTTSVLGEPLPMPFT 932
Query: 78 KTLP 81
TLP
Sbjct: 933 PTLP 936
>gi|110815809 zinc finger, RAN-binding domain containing 1 protein
[Homo sapiens]
Length = 708
Score = 26.6 bits (57), Expect = 4.5
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 30 DNPKPNVSEALRSAGLPSHSSVISQHS----KGSKSPDLLMYQGPPDTAEIIKTLPQKYR 85
D+P+PN EA+ A SS+I++ +GS S + PP T + R
Sbjct: 173 DHPRPNNIEAIELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQR 232
Query: 86 RKLV----SQEEME 95
+L S+EE+E
Sbjct: 233 IELAGAVGSKEELE 246
>gi|190343010 SP110 nuclear body protein isoform a [Homo sapiens]
Length = 689
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
Query: 18 PHTPLIRFPDRRDN-PKPNVSEALRSAGLPSHSSVISQHSKGSK 60
PH+PL P+ RDN P+PN E P S KG K
Sbjct: 242 PHSPLGSMPEIRDNSPEPNDPEE------PQEVSSTPSDKKGKK 279
>gi|190343008 SP110 nuclear body protein isoform b [Homo sapiens]
Length = 549
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
Query: 18 PHTPLIRFPDRRDN-PKPNVSEALRSAGLPSHSSVISQHSKGSK 60
PH+PL P+ RDN P+PN E P S KG K
Sbjct: 242 PHSPLGSMPEIRDNSPEPNDPEE------PQEVSSTPSDKKGKK 279
>gi|190343006 SP110 nuclear body protein isoform c [Homo sapiens]
Length = 713
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
Query: 18 PHTPLIRFPDRRDN-PKPNVSEALRSAGLPSHSSVISQHSKGSK 60
PH+PL P+ RDN P+PN E P S KG K
Sbjct: 242 PHSPLGSMPEIRDNSPEPNDPEE------PQEVSSTPSDKKGKK 279
>gi|47578107 delangin isoform B [Homo sapiens]
Length = 2697
Score = 26.6 bits (57), Expect = 4.5
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 17 KPHTPLIRFPDRRDNPKPNVSEALRSAGLPSHSSVISQHSKGSKSPDLLMYQGPPDTAEI 76
+P TP R +RRD+ KP+ + + H S KS + PD +
Sbjct: 754 RPETPKHRHDNRRDSGKPSTE---KKPEVSKHKQDTKSDSPRLKSERAEALKQRPDGRSV 810
Query: 77 IKTLPQKYRRKLVSQEEMEFIQRGGPE 103
++L + + K S + E + G +
Sbjct: 811 SESLRRDHDNKQKSDDRGESERHRGDQ 837
>gi|47578105 delangin isoform A [Homo sapiens]
Length = 2804
Score = 26.6 bits (57), Expect = 4.5
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 17 KPHTPLIRFPDRRDNPKPNVSEALRSAGLPSHSSVISQHSKGSKSPDLLMYQGPPDTAEI 76
+P TP R +RRD+ KP+ + + H S KS + PD +
Sbjct: 754 RPETPKHRHDNRRDSGKPSTE---KKPEVSKHKQDTKSDSPRLKSERAEALKQRPDGRSV 810
Query: 77 IKTLPQKYRRKLVSQEEMEFIQRGGPE 103
++L + + K S + E + G +
Sbjct: 811 SESLRRDHDNKQKSDDRGESERHRGDQ 837
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 26.6 bits (57), Expect = 4.5
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 2 MGSKMASASRVVQVVKPHTPLIRFPDRRD--NPKPNVSEALRSAGLPSHSSVISQHS 56
+GS+ S S TP+ R P R N N+ E +P+H +S+ S
Sbjct: 1515 LGSRTCSTSATTTAPSNSTPIARHPGRTKGYNSDDNLCEPSLEFEVPNHRQYVSRPS 1571
>gi|239756935 PREDICTED: hypothetical protein XP_002345110 [Homo
sapiens]
Length = 237
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 17 KPHTPLIRFPDRRDNPKPNVSE--ALRSAG 44
+P +P I+ PDR NP+P + A RS G
Sbjct: 23 EPGSPSIQGPDRPQNPRPEAGKDGARRSPG 52
>gi|239751447 PREDICTED: hypothetical protein XP_002347851 [Homo
sapiens]
Length = 237
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 17 KPHTPLIRFPDRRDNPKPNVSE--ALRSAG 44
+P +P I+ PDR NP+P + A RS G
Sbjct: 23 EPGSPSIQGPDRPQNPRPEAGKDGARRSPG 52
>gi|239745952 PREDICTED: hypothetical protein XP_002343584 [Homo
sapiens]
Length = 237
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 17 KPHTPLIRFPDRRDNPKPNVSE--ALRSAG 44
+P +P I+ PDR NP+P + A RS G
Sbjct: 23 EPGSPSIQGPDRPQNPRPEAGKDGARRSPG 52
>gi|119943106 synapse-associated protein 102 isoform a [Homo
sapiens]
Length = 817
Score = 26.2 bits (56), Expect = 5.9
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 10 SRVVQVVKPHTPLIRFPDRRDNPKP------NVSEALRSAGLPSHSSVISQHSKGSKS 61
SR V+ +K P++R RR P P N+ + + G + +QH G S
Sbjct: 197 SRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNS 254
>gi|13129074 proline rich Gla (G-carboxyglutamic acid) 4
(transmembrane) [Homo sapiens]
Length = 226
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 19 HTPLIRFPDRRDNPKPNVSEALRSAGLPSHSSVISQHSKGSKSP 62
HTP I F + + ++ AGLPS+ ++ K S SP
Sbjct: 160 HTPSIIFRRPEEAALSPLPPSVEDAGLPSYEQAVALTRKHSVSP 203
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,350,064
Number of Sequences: 37866
Number of extensions: 189920
Number of successful extensions: 462
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 449
Number of HSP's gapped (non-prelim): 40
length of query: 103
length of database: 18,247,518
effective HSP length: 74
effective length of query: 29
effective length of database: 15,445,434
effective search space: 447917586
effective search space used: 447917586
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.