Guide to the Human Genome
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Name: ZRANB1 Sequence: fasta or formatted (708aa) NCBI GI: 110815809
Description:

zinc finger, RAN-binding domain containing 1 protein

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         48           2
 C cysteine            3.5         25           2
 D aspartate           6.5         46           3
 E glutamate           8.1         57           3
 F phenylalanine       3.1         22           1
 G glycine             5.1         36           2
 H histidine           2.1         15           1
 I isoleucine          4.4         31           2
 K lysine              4.5         32           2
 L leucine             9.3         66           2
 M methionine          1.6         11           1
 N asparagine          3.2         23           2
 P proline             4.2         30           2
 Q glutamine           4.5         32           2
 R arginine            7.5         53           3
 S serine              8.9         63           2
 T threonine           5.4         38           1
 V valine              5.2         37           2
 W tryptophan          3.1         22           1
 Y tyrosine            3.0         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, RAN-binding domain containing 1 protei... 
TNFAIP3               0.072   tumor necrosis factor, alpha-induced protein 3 
OTUD7B                0.066   zinc finger protein Cezanne 
OTUD7A                0.064   OTU domain containing 7A 
NUP153                0.028   nucleoporin 153kDa 
RANBP2                0.026   RAN binding protein 2 
RNF31                 0.017   ring finger protein 31 
SOLH                  0.016   small optic lobes 
NEIL3                 0.010   nei endonuclease VIII-like 3 
YAF2                  0.008   YY1 associated factor 2 
MAP3K7IP2             0.008   mitogen-activated protein kinase kinase kinase 7 int...
ZRANB2                0.008   zinc finger protein 265 isoform 1 
ZRANB2                0.008   zinc finger protein 265 isoform 2 
RYBP                  0.008   RING1 and YY1 binding protein 
ZRANB3                0.008   zinc finger, RAN-binding domain containing 3 
MAP3K7IP3             0.007   mitogen-activated protein kinase kinase kinase 7 int...
SHARPIN               0.007   shank-interacting protein-like 1 
RNF113B               0.006   ring finger protein 113B 
LOC100293187          0.006   PREDICTED: similar to hCG1997218 
LOC100291294          0.006   PREDICTED: hypothetical protein XP_002346621 
LOC100289257          0.006   PREDICTED: hypothetical protein XP_002342415 
MPHOSPH10             0.006   M-phase phosphoprotein 10 
RNF113A               0.006   ring finger protein 113A 
NPLOC4                0.006   nuclear protein localization 4 
MYH14                 0.005   myosin, heavy chain 14 isoform 1 
MYH14                 0.005   myosin, heavy chain 14 isoform 2 
MYH14                 0.005   myosin, heavy chain 14 isoform 3 
EVPL                  0.005   envoplakin 
KIF2A                 0.005   kinesin heavy chain member 2 isoform 2 
SRGAP3                0.005   SLIT-ROBO Rho GTPase activating protein 3 isoform b ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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