Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PRRG4 Sequence: fasta or formatted (226aa) NCBI GI: 13129074
Description:

proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)

Referenced in:

Coagulation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         15           2
 C cysteine            2.7          6           1
 D aspartate           2.7          6           1
 E glutamate           8.8         20           2
 F phenylalanine       6.2         14           2
 G glycine             6.6         15           1
 H histidine           3.5          8           1
 I isoleucine          4.0          9           2
 K lysine              5.3         12           2
 L leucine            11.1         25           2
 M methionine          1.3          3           1
 N asparagine          3.1          7           1
 P proline             8.0         18           4
 Q glutamine           1.8          4           1
 R arginine            6.2         14           2
 S serine              7.1         16           2
 T threonine           5.8         13           2
 V valine              5.3         12           1
 W tryptophan          0.4          1           1
 Y tyrosine            3.5          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proline rich Gla (G-carboxyglutamic acid) 4 (transme... 
PRRG2                 0.192   proline rich Gla (G-carboxyglutamic acid) 2 
F7                    0.104   coagulation factor VII isoform a precursor 
F7                    0.102   coagulation factor VII isoform b precursor 
F9                    0.097   coagulation factor IX preproprotein 
F10                   0.097   coagulation factor X preproprotein 
PRRG3                 0.088   proline rich Gla (G-carboxyglutamic acid) 3 (transme...
PRRG1                 0.086   proline rich Gla (G-carboxyglutamic acid) 1 
PRRG1                 0.086   proline rich Gla (G-carboxyglutamic acid) 1 
PROC                  0.075   protein C 
PROZ                  0.070   protein Z, vitamin K-dependent plasma glycoprotein [H...
PROS1                 0.066   protein S, alpha preproprotein 
F2                    0.061   coagulation factor II preproprotein 
GAS6                  0.045   growth arrest-specific 6 isoform 1 precursor 
LOC100133142          0.020   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.020   PREDICTED: similar to zinc finger protein 208 [Homo...
RC3H1                 0.020   roquin 
DIAPH1                0.014   diaphanous 1 isoform 2 
DIAPH1                0.014   diaphanous 1 isoform 1 
DCLK2                 0.014   doublecortin-like kinase 2 isoform b 
DCLK2                 0.014   doublecortin-like kinase 2 isoform a 
LAPTM4A               0.014   lysosomal protein transmembrane 4 alpha 
LITAF                 0.011   lipopolysaccharide-induced TNF-alpha factor isoform...
LITAF                 0.011   lipopolysaccharide-induced TNF-alpha factor isoform...
LITAF                 0.011   lipopolysaccharide-induced TNF-alpha factor isoform ...
PDCD6IP               0.011   programmed cell death 6 interacting protein isoform...
PDCD6IP               0.011   programmed cell death 6 interacting protein isoform ...
LOC728888             0.011   PREDICTED: similar to acyl-CoA synthetase medium-ch...
YWHAG                 0.009   tyrosine 3-monooxygenase/tryptophan 5-monooxygenase ...
LOC100132247          0.009   hypothetical protein LOC100132247 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press