Guide to the Human Genome
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Search of human proteins with 150456465

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|150456465 tetratricopeptide repeat domain 9 [Homo sapiens]
         (222 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|150456465 tetratricopeptide repeat domain 9 [Homo sapiens]         452   e-127
gi|46275820 tetratricopeptide repeat domain 9B [Homo sapiens]         225   2e-59
gi|28603842 tetratricopeptide repeat domain 9C [Homo sapiens]         157   7e-39
gi|52630440 FK506-binding protein 8 [Homo sapiens]                     50   2e-06
gi|4826932 peptidylprolyl isomerase D [Homo sapiens]                   49   3e-06
gi|27262638 sperm associated antigen 1 [Homo sapiens]                  44   1e-04
gi|27262636 sperm associated antigen 1 [Homo sapiens]                  44   1e-04
gi|224809329 FK506 binding protein 5 isoform 1 [Homo sapiens]          43   2e-04
gi|224809327 FK506 binding protein 5 isoform 1 [Homo sapiens]          43   2e-04
gi|4758384 FK506 binding protein 5 isoform 1 [Homo sapiens]            43   2e-04
gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens]           42   4e-04
gi|4503729 FK506 binding protein 52 [Homo sapiens]                     40   0.001
gi|27414497 zinc finger CCCH-type containing 7A [Homo sapiens]         39   0.003
gi|89179321 smooth muscle cell associated protein-1 isoform 3 [H...    38   0.006
gi|29725607 smooth muscle cell associated protein-1 isoform 2 [H...    38   0.006
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     38   0.006
gi|87299628 biorientation of chromosomes in cell division 1-like...    38   0.008
gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens]           37   0.010
gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens]           37   0.010
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ...    37   0.013
gi|118498339 EMI domain containing 2 [Homo sapiens]                    37   0.013
gi|206725544 FK506 binding protein 6 isoform b [Homo sapiens]          36   0.023
gi|146229346 FK506 binding protein 6 isoform a [Homo sapiens]          36   0.023
gi|201860300 aryl hydrocarbon receptor interacting protein [Homo...    36   0.030
gi|239753545 PREDICTED: similar to hCG2041452 [Homo sapiens]           35   0.039
gi|239748117 PREDICTED: hypothetical protein XP_002346556 [Homo ...    35   0.039
gi|239742016 PREDICTED: hypothetical protein XP_002342392 [Homo ...    35   0.039
gi|91208420 bassoon protein [Homo sapiens]                             35   0.039
gi|75750484 cardiomyopathy associated 4 isoform 2 [Homo sapiens]       35   0.039
gi|27477061 cardiomyopathy associated 4 isoform 1 [Homo sapiens]       35   0.039

>gi|150456465 tetratricopeptide repeat domain 9 [Homo sapiens]
          Length = 222

 Score =  452 bits (1162), Expect = e-127
 Identities = 222/222 (100%), Positives = 222/222 (100%)

Query: 1   MERKGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGGGGAPARGQVGAAAEPAELIRRAHEF 60
           MERKGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGGGGAPARGQVGAAAEPAELIRRAHEF
Sbjct: 1   MERKGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGGGGAPARGQVGAAAEPAELIRRAHEF 60

Query: 61  KSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQS 120
           KSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQS
Sbjct: 61  KSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQS 120

Query: 121 KTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDY 180
           KTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDY
Sbjct: 121 KTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDY 180

Query: 181 DKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREKEAM 222
           DKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREKEAM
Sbjct: 181 DKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREKEAM 222


>gi|46275820 tetratricopeptide repeat domain 9B [Homo sapiens]
          Length = 239

 Score =  225 bits (574), Expect = 2e-59
 Identities = 122/221 (55%), Positives = 155/221 (70%), Gaps = 26/221 (11%)

Query: 14  PSPPAAGEGQRPPPPLCVPGGGGGAPAR-------------GQVGAAAEPAELIRRAHEF 60
           P PP      RPPP L  PG G G+ +R             G +GAA + +  +R A  F
Sbjct: 16  PEPPP-----RPPPALSPPGSGPGSGSRHGSARPGPTPEPSGSLGAALDSS--LRAAVAF 68

Query: 61  KSQGAQCYKDKKFREAIGKYHRALLELKGL--LPPPGERERDSRPASPAGALKPGRLSEE 118
           K++G +CY++KKFREAIGKYHRALL+LK      P G       P S  G   P RLSEE
Sbjct: 69  KAEGQRCYREKKFREAIGKYHRALLQLKAAQGARPSGLPAPAPGPTSSPG---PARLSEE 125

Query: 119 QSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLG 178
           Q + VE+ E++CY+SL ACLLQ+ELVNYERV+EYCLKVL+K+  NFKA YR+G+AFYHLG
Sbjct: 126 QRRLVESTEVECYDSLTACLLQSELVNYERVREYCLKVLEKQQGNFKATYRAGIAFYHLG 185

Query: 179 DYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCS-QRE 218
           DY +AL YL+EAR+++PTDTNV+RYIQLT++K++RCS QRE
Sbjct: 186 DYARALRYLQEARSREPTDTNVLRYIQLTQLKMNRCSLQRE 226


>gi|28603842 tetratricopeptide repeat domain 9C [Homo sapiens]
          Length = 171

 Score =  157 bits (397), Expect = 7e-39
 Identities = 80/167 (47%), Positives = 113/167 (67%), Gaps = 7/167 (4%)

Query: 54  IRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPG 113
           ++ A  +K +G Q Y++ K+R+A+ +YHRALL+L+GL P       +  P  PA      
Sbjct: 5   LQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPA------ 58

Query: 114 RLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVA 173
            L+ EQ   +   + DCYN+LAACLLQ E VNYERV+EY  KVL+++ +N KALYR+GVA
Sbjct: 59  -LTPEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVA 117

Query: 174 FYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREKE 220
           F+HL DYD+A +YL  A  +QP D NV RY+QLT+ +LS   ++EK+
Sbjct: 118 FFHLQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQ 164


>gi|52630440 FK506-binding protein 8 [Homo sapiens]
          Length = 413

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 29/104 (27%), Positives = 58/104 (55%), Gaps = 5/104 (4%)

Query: 117 EEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYH 176
           EE+++ ++ +++ C N+LAA   Q +L +Y      C  VL+ + +N KAL+R G     
Sbjct: 263 EEEAQLLQ-LKVKCLNNLAAS--QLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVLAQ 319

Query: 177 LGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREKE 220
            G+Y +A+  L+ A   +P++  +  + +L+++     +QR  E
Sbjct: 320 QGEYSEAIPILRAALKLEPSNKTI--HAELSKLVKKHAAQRSTE 361


>gi|4826932 peptidylprolyl isomerase D [Homo sapiens]
          Length = 370

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 123 VEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDK 182
           ++ I + C  ++ AC L+  + N++   + CL+ L+ +  N KALYR    +  L +YD+
Sbjct: 268 LQPIALSCVLNIGACKLK--MSNWQGAIDSCLEALELDPSNTKALYRRAQGWQGLKEYDQ 325

Query: 183 ALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREKE 220
           AL  LK+A+   P D  +    +L ++K    +Q++KE
Sbjct: 326 ALADLKKAQGIAPEDKAI--QAELLKVKQKIKAQKDKE 361


>gi|27262638 sperm associated antigen 1 [Homo sapiens]
          Length = 926

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 52/184 (28%), Positives = 70/184 (38%), Gaps = 44/184 (23%)

Query: 4   KGSAAGAKGNPSPPAAGEGQRPP----PPLCVPGGGGGAPARGQVGAAAEPAELIRRAHE 59
           K  A GA      P AG  +R P          GG  G P  GQ   A  PA L      
Sbjct: 397 KRPARGAPQRGQTPEAGADKRSPRRASAAAAAGGGATGHPGGGQ--GAENPAGL------ 448

Query: 60  FKSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQ 119
            KSQG + ++  +F EA GKY  A+     LL P G                        
Sbjct: 449 -KSQGNELFRSGQFAEAAGKYSAAI----ALLEPAG------------------------ 479

Query: 120 SKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGD 179
           S+  + + I  Y++ AAC L+    N     + C + L+    + K L R  +A+  L  
Sbjct: 480 SEIADDLSI-LYSNRAACYLKEG--NCSGCIQDCNRALELHPFSMKPLLRRAMAYETLEQ 536

Query: 180 YDKA 183
           Y KA
Sbjct: 537 YGKA 540



 Score = 39.3 bits (90), Expect = 0.003
 Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 39/136 (28%)

Query: 61  KSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQS 120
           K +G QC  DK +++A+ KY   L                                    
Sbjct: 627 KEEGNQCVNDKNYKDALSKYSECL------------------------------------ 650

Query: 121 KTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDY 180
             +   E   Y + A C L+  L  +E  K+ C + L+    N KA YR  +A   L +Y
Sbjct: 651 -KINNKECAIYTNRALCYLK--LCQFEEAKQDCDQALQLADGNVKAFYRRALAHKGLKNY 707

Query: 181 DKALYYLKEARTQQPT 196
            K+L  L +     P+
Sbjct: 708 QKSLIDLNKVILLDPS 723



 Score = 28.5 bits (62), Expect = 4.8
 Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 10/135 (7%)

Query: 69  KDKKFREAIGKYHRALLELKGLLPPPGERERD---SRPASPAG-ALKPGRLSEE---QSK 121
           +D K +  I K H + +E +       E+E+D   +R       A   G   E     ++
Sbjct: 175 EDYKEKTVIDKSHLSKIETRIDTAGLTEKEKDFLATREKEKGNEAFNSGDYEEAVMYYTR 234

Query: 122 TVEAIE-IDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDY 180
           ++ A+  +  YN+ A    + +L N+    + C KVL+ E  N KAL R    + H    
Sbjct: 235 SISALPTVVAYNNRAQA--EIKLQNWNSAFQDCEKVLELEPGNVKALLRRATTYKHQNKL 292

Query: 181 DKALYYLKEARTQQP 195
            +A   L +    +P
Sbjct: 293 REATEDLSKVLDVEP 307


>gi|27262636 sperm associated antigen 1 [Homo sapiens]
          Length = 926

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 52/184 (28%), Positives = 70/184 (38%), Gaps = 44/184 (23%)

Query: 4   KGSAAGAKGNPSPPAAGEGQRPP----PPLCVPGGGGGAPARGQVGAAAEPAELIRRAHE 59
           K  A GA      P AG  +R P          GG  G P  GQ   A  PA L      
Sbjct: 397 KRPARGAPQRGQTPEAGADKRSPRRASAAAAAGGGATGHPGGGQ--GAENPAGL------ 448

Query: 60  FKSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQ 119
            KSQG + ++  +F EA GKY  A+     LL P G                        
Sbjct: 449 -KSQGNELFRSGQFAEAAGKYSAAI----ALLEPAG------------------------ 479

Query: 120 SKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGD 179
           S+  + + I  Y++ AAC L+    N     + C + L+    + K L R  +A+  L  
Sbjct: 480 SEIADDLSI-LYSNRAACYLKEG--NCSGCIQDCNRALELHPFSMKPLLRRAMAYETLEQ 536

Query: 180 YDKA 183
           Y KA
Sbjct: 537 YGKA 540



 Score = 39.3 bits (90), Expect = 0.003
 Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 39/136 (28%)

Query: 61  KSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQS 120
           K +G QC  DK +++A+ KY   L                                    
Sbjct: 627 KEEGNQCVNDKNYKDALSKYSECL------------------------------------ 650

Query: 121 KTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDY 180
             +   E   Y + A C L+  L  +E  K+ C + L+    N KA YR  +A   L +Y
Sbjct: 651 -KINNKECAIYTNRALCYLK--LCQFEEAKQDCDQALQLADGNVKAFYRRALAHKGLKNY 707

Query: 181 DKALYYLKEARTQQPT 196
            K+L  L +     P+
Sbjct: 708 QKSLIDLNKVILLDPS 723



 Score = 28.5 bits (62), Expect = 4.8
 Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 10/135 (7%)

Query: 69  KDKKFREAIGKYHRALLELKGLLPPPGERERD---SRPASPAG-ALKPGRLSEE---QSK 121
           +D K +  I K H + +E +       E+E+D   +R       A   G   E     ++
Sbjct: 175 EDYKEKTVIDKSHLSKIETRIDTAGLTEKEKDFLATREKEKGNEAFNSGDYEEAVMYYTR 234

Query: 122 TVEAIE-IDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDY 180
           ++ A+  +  YN+ A    + +L N+    + C KVL+ E  N KAL R    + H    
Sbjct: 235 SISALPTVVAYNNRAQA--EIKLQNWNSAFQDCEKVLELEPGNVKALLRRATTYKHQNKL 292

Query: 181 DKALYYLKEARTQQP 195
            +A   L +    +P
Sbjct: 293 REATEDLSKVLDVEP 307


>gi|224809329 FK506 binding protein 5 isoform 1 [Homo sapiens]
          Length = 457

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 9/106 (8%)

Query: 115 LSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAF 174
           LSE++SK  E+  +  + +LA C L+  L  Y +  E C K L  +  N K LYR G A 
Sbjct: 304 LSEKESKASESFLLAAFLNLAMCYLK--LREYTKAVECCDKALGLDSANEKGLYRRGEAQ 361

Query: 175 YHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREKE 220
             + +++ A    ++     P +       +   +++S C ++ KE
Sbjct: 362 LLMNEFESAKGDFEKVLEVNPQN-------KAARLQISMCQKKAKE 400


>gi|224809327 FK506 binding protein 5 isoform 1 [Homo sapiens]
          Length = 457

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 9/106 (8%)

Query: 115 LSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAF 174
           LSE++SK  E+  +  + +LA C L+  L  Y +  E C K L  +  N K LYR G A 
Sbjct: 304 LSEKESKASESFLLAAFLNLAMCYLK--LREYTKAVECCDKALGLDSANEKGLYRRGEAQ 361

Query: 175 YHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREKE 220
             + +++ A    ++     P +       +   +++S C ++ KE
Sbjct: 362 LLMNEFESAKGDFEKVLEVNPQN-------KAARLQISMCQKKAKE 400


>gi|4758384 FK506 binding protein 5 isoform 1 [Homo sapiens]
          Length = 457

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 9/106 (8%)

Query: 115 LSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAF 174
           LSE++SK  E+  +  + +LA C L+  L  Y +  E C K L  +  N K LYR G A 
Sbjct: 304 LSEKESKASESFLLAAFLNLAMCYLK--LREYTKAVECCDKALGLDSANEKGLYRRGEAQ 361

Query: 175 YHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREKE 220
             + +++ A    ++     P +       +   +++S C ++ KE
Sbjct: 362 LLMNEFESAKGDFEKVLEVNPQN-------KAARLQISMCQKKAKE 400


>gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens]
          Length = 349

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 49/170 (28%), Positives = 67/170 (39%), Gaps = 39/170 (22%)

Query: 34  GGGGAPAR--------GQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALL 85
           G  G P R        G+     E +E    A E +++G + ++      A   Y RAL 
Sbjct: 179 GHSGPPVRLTLASFTQGRDSWELETSEKEALAREERARGTELFRAGNPEGAARCYGRAL- 237

Query: 86  ELKGLLPPPGERERDSRPASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVN 145
            L   LPPPG  ER    A+                            LAAC  Q  L  
Sbjct: 238 RLLLTLPPPGPPERTVLHAN----------------------------LAAC--QLLLGQ 267

Query: 146 YERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQP 195
            +   + C +VL++E  + KALYR GVA   LG+ +KA   LK+     P
Sbjct: 268 PQLAAQSCDRVLEREPGHLKALYRRGVAQAALGNLEKATADLKKVLAIDP 317


>gi|4503729 FK506 binding protein 52 [Homo sapiens]
          Length = 459

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 24/169 (14%)

Query: 52  ELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALK 111
           E + ++   K +G   +K+       GKY +ALL+ K ++      E +S          
Sbjct: 265 EKLEQSTIVKERGTVYFKE-------GKYKQALLQYKKIV---SWLEYESS--------- 305

Query: 112 PGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSG 171
               S E+++  +A+ +  + +LA C L+ +   +    E C K L+ +  N K L+R G
Sbjct: 306 ---FSNEEAQKAQALRLASHLNLAMCHLKLQA--FSAAIESCNKALELDSNNEKGLFRRG 360

Query: 172 VAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREKE 220
            A   + D++ A    ++     P +      + + + ++ R   REK+
Sbjct: 361 EAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKK 409


>gi|27414497 zinc finger CCCH-type containing 7A [Homo sapiens]
          Length = 971

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 15/107 (14%)

Query: 120 SKTVEAIEIDCYNSLAACLLQAELVN---------------YERVKEYCLKVLKKEGENF 164
           S+  EA+ I  Y      L+  E++                +++V E C  VL     N 
Sbjct: 64  SQYTEALNIADYAKSEEILIPKEIIEKLYINRIACYSNMGFHDKVLEDCNIVLSLNASNC 123

Query: 165 KALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKL 211
           KALYR   A   LG Y KA   + +     P D +VI+  Q    KL
Sbjct: 124 KALYRKSKALSDLGRYKKAYDAVAKCSLAVPQDEHVIKLTQELAQKL 170


>gi|89179321 smooth muscle cell associated protein-1 isoform 3 [Homo
           sapiens]
          Length = 929

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 16/100 (16%)

Query: 131 YNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEA 190
           + + AAC L+ E  +Y++ +    K ++K+G + KALYR   A   LG  D+A+  L+  
Sbjct: 46  HRNRAACHLKLE--DYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRC 103

Query: 191 RTQQPTD--------------TNVIRYIQLTEMKLSRCSQ 216
            + +P +                 +RY+  T+ K+ +  Q
Sbjct: 104 VSLEPKNKVFQEALRNIGGQIQEKVRYMSSTDAKVEQMFQ 143


>gi|29725607 smooth muscle cell associated protein-1 isoform 2 [Homo
           sapiens]
          Length = 944

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 16/100 (16%)

Query: 131 YNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEA 190
           + + AAC L+ E  +Y++ +    K ++K+G + KALYR   A   LG  D+A+  L+  
Sbjct: 61  HRNRAACHLKLE--DYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRC 118

Query: 191 RTQQPTD--------------TNVIRYIQLTEMKLSRCSQ 216
            + +P +                 +RY+  T+ K+ +  Q
Sbjct: 119 VSLEPKNKVFQEALRNIGGQIQEKVRYMSSTDAKVEQMFQ 158


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 33/120 (27%), Positives = 46/120 (38%), Gaps = 4/120 (3%)

Query: 14  PSPPAAGEGQRPPPPLCVPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDK-- 71
           P PPA  + Q+PPPP   P   GGA   G         E++R        G +  + +  
Sbjct: 215 PQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQ 274

Query: 72  --KFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQSKTVEAIEID 129
                EA  +       L  L  P G+R   + PA+ A   +  R  EE+    E  E D
Sbjct: 275 GLLEEEAAARGRLERTRLGALALPRGDRPGRAPPAASARPSRSKRGGEERVLEKEEEEDD 334


>gi|87299628 biorientation of chromosomes in cell division 1-like
          [Homo sapiens]
          Length = 3051

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 14 PSPPAAGEGQRPPPPLCVPGGGGGAPARGQVGAAAEPAELIRR-AHEFKSQG 64
          P PP      +PPPP   PG G GA   G  GA A   +L+    +  KSQG
Sbjct: 14 PPPPPPQPQPQPPPPPPGPGAGPGAGGAGGAGAGAGDPQLVAMIVNHLKSQG 65


>gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens]
          Length = 1474

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 8/56 (14%)

Query: 4    KGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGGGGAPARGQVGAAAEPAELIRRAHE 59
            +GS++ AKG P P      + P PP  VPGGGG   A G  GA     EL+ +A E
Sbjct: 1294 RGSSSAAKGPPPP------EPPVPP--VPGGGGEEEAGGPGGADRAEIELLYKALE 1341


>gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens]
          Length = 1469

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 8/56 (14%)

Query: 4    KGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGGGGAPARGQVGAAAEPAELIRRAHE 59
            +GS++ AKG P P      + P PP  VPGGGG   A G  GA     EL+ +A E
Sbjct: 1289 RGSSSAAKGPPPP------EPPVPP--VPGGGGEEEAGGPGGADRAEIELLYKALE 1336


>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
           sapiens]
          Length = 238

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 30/62 (48%), Positives = 32/62 (51%), Gaps = 7/62 (11%)

Query: 3   RKGSAAGAKGNPSPPAA----GEGQRPPPPLCV-PGGGGGAPARGQVGAAAEPAELIRRA 57
           R+G A G +G P PP      GE  RP PP    PG GG APA G V   A  A L RR 
Sbjct: 62  RRGKA-GLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAAGYVPRIAFYAGL-RRP 119

Query: 58  HE 59
           HE
Sbjct: 120 HE 121


>gi|118498339 EMI domain containing 2 [Homo sapiens]
          Length = 439

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 9   GAKGNPSPPAAGEGQRPPPPLCVPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCY 68
           G +G P PP     + PP P   PG  G A  RG VG + EP   ++     K+  A+  
Sbjct: 303 GPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPG--VKGEEGEKAATAEGE 360

Query: 69  KDKKFREAI 77
             ++ REA+
Sbjct: 361 GVQQLREAL 369


>gi|206725544 FK506 binding protein 6 isoform b [Homo sapiens]
          Length = 322

 Score = 36.2 bits (82), Expect = 0.023
 Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 33/161 (20%)

Query: 64  GAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQSKTV 123
           G   ++  +F +A  +Y RALL L+    PP                       E+   V
Sbjct: 173 GNYLFRQNRFYDAKVRYKRALLLLRRRSAPP-----------------------EEQHLV 209

Query: 124 EAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKA 183
           EA ++    +L+   L+ +         Y  + L  + +N KAL+R G A   L +Y KA
Sbjct: 210 EAAKLPVLLNLSFTYLKLDRPTIALC--YGEQALIIDQKNAKALFRCGQACLLLTEYQKA 267

Query: 184 LYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQ----REKE 220
             +L  A+ +QP + ++   ++    KL+ C +    +EKE
Sbjct: 268 RDFLVRAQKEQPFNHDINNELK----KLASCYRDYVDKEKE 304


>gi|146229346 FK506 binding protein 6 isoform a [Homo sapiens]
          Length = 327

 Score = 36.2 bits (82), Expect = 0.023
 Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 33/161 (20%)

Query: 64  GAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQSKTV 123
           G   ++  +F +A  +Y RALL L+    PP                       E+   V
Sbjct: 178 GNYLFRQNRFYDAKVRYKRALLLLRRRSAPP-----------------------EEQHLV 214

Query: 124 EAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKA 183
           EA ++    +L+   L+ +         Y  + L  + +N KAL+R G A   L +Y KA
Sbjct: 215 EAAKLPVLLNLSFTYLKLDRPTIALC--YGEQALIIDQKNAKALFRCGQACLLLTEYQKA 272

Query: 184 LYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQ----REKE 220
             +L  A+ +QP + ++   ++    KL+ C +    +EKE
Sbjct: 273 RDFLVRAQKEQPFNHDINNELK----KLASCYRDYVDKEKE 309


>gi|201860300 aryl hydrocarbon receptor interacting protein [Homo
           sapiens]
          Length = 330

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 31/175 (17%)

Query: 49  EPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAG 108
           E A+ +   H+   +G + Y++   +EA  KY+ A+  LK L       +   +P SP  
Sbjct: 174 EKAKAVPLIHQ---EGNRLYREGHVKEAAAKYYDAIACLKNL-------QMKEQPGSP-- 221

Query: 109 ALKPGRLSEEQSKTVEAIEIDCYNS---LAACLLQAELVNYERVKEYCLKVLKKEGENFK 165
                          E I++D   +   L  C  +  +  Y  V ++C  +L K  +N K
Sbjct: 222 ---------------EWIQLDQQITPLLLNYCQCKLVVEEYYEVLDHCSSILNKYDDNVK 266

Query: 166 ALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVI-RYIQLTEMKLSRCSQREK 219
           A ++ G A   + +  +A     +     P    V+ R +Q  E ++ +  + +K
Sbjct: 267 AYFKRGKAHAAVWNAQEAQADFAKVLELDPALAPVVSRELQALEARIRQKDEEDK 321


>gi|239753545 PREDICTED: similar to hCG2041452 [Homo sapiens]
          Length = 410

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 5/128 (3%)

Query: 15  SPPAAGEGQRPPPPLCVPGGGGGAPARG-QVGAAAEPAELIRRAHEFKSQGAQCYKDKKF 73
           S   +G+G     P  V GG GGA   G + G AA PA + R +     +  +  +D + 
Sbjct: 32  SEAGSGQGGAGLHPRWVWGGSGGAVGTGRRGGGAARPAPVRRGSPSSPGEPYRPEEDSRM 91

Query: 74  REAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQSKTVEAIEIDCYNS 133
             A  +   + +  K     P   E    P SPA A  PG      S   EA+E D  + 
Sbjct: 92  TPASPEARTSPVHPKF----PKIPETSVAPGSPATAGPPGSWVTSASTVGEALESDGISD 147

Query: 134 LAACLLQA 141
           L     QA
Sbjct: 148 LGRQFSQA 155


>gi|239748117 PREDICTED: hypothetical protein XP_002346556 [Homo
           sapiens]
          Length = 410

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 5/128 (3%)

Query: 15  SPPAAGEGQRPPPPLCVPGGGGGAPARG-QVGAAAEPAELIRRAHEFKSQGAQCYKDKKF 73
           S   +G+G     P  V GG GGA   G + G AA PA + R +     +  +  +D + 
Sbjct: 32  SEAGSGQGGAGLHPRWVWGGSGGAVGTGRRGGGAARPAPVRRGSPSSPGEPYRPEEDSRM 91

Query: 74  REAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQSKTVEAIEIDCYNS 133
             A  +   + +  K     P   E    P SPA A  PG      S   EA+E D  + 
Sbjct: 92  TPASPEARTSPVHPKF----PKIPETSVAPGSPATAGPPGSWVTSASTVGEALESDGISD 147

Query: 134 LAACLLQA 141
           L     QA
Sbjct: 148 LGRQFSQA 155


>gi|239742016 PREDICTED: hypothetical protein XP_002342392 [Homo
           sapiens]
          Length = 410

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 5/128 (3%)

Query: 15  SPPAAGEGQRPPPPLCVPGGGGGAPARG-QVGAAAEPAELIRRAHEFKSQGAQCYKDKKF 73
           S   +G+G     P  V GG GGA   G + G AA PA + R +     +  +  +D + 
Sbjct: 32  SEAGSGQGGAGLHPRWVWGGSGGAVGTGRRGGGAARPAPVRRGSPSSPGEPYRPEEDSRM 91

Query: 74  REAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQSKTVEAIEIDCYNS 133
             A  +   + +  K     P   E    P SPA A  PG      S   EA+E D  + 
Sbjct: 92  TPASPEARTSPVHPKF----PKIPETSVAPGSPATAGPPGSWVTSASTVGEALESDGISD 147

Query: 134 LAACLLQA 141
           L     QA
Sbjct: 148 LGRQFSQA 155


>gi|91208420 bassoon protein [Homo sapiens]
          Length = 3926

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 41/165 (24%)

Query: 10   AKGNPSP-PAAGEGQRPPPPLCVPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCY 68
            A G P+P P AG+    PP    PGGG GA              L R   E K + +Q  
Sbjct: 2322 AAGAPAPAPLAGQ---KPPADAAPGGGSGA--------------LSRPGFE-KEEASQEE 2363

Query: 69   KDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQSKTVEAIEI 128
            + +K +E + +  R  +EL+                     L+  RL EE  +  E +E+
Sbjct: 2364 RQRKQQEQLLQLERERVELE--------------------KLRQLRLQEELER--ERVEL 2401

Query: 129  DCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVA 173
              +      L+Q EL   + +K + L+  ++E +   AL R  +A
Sbjct: 2402 QRHREEEQLLVQRELQELQTIKHHVLQQQQEERQAQFALQREQLA 2446



 Score = 31.2 bits (69), Expect = 0.74
 Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 7/49 (14%)

Query: 9  GAKGNPSPPA-AGEGQRPPP------PLCVPGGGGGAPARGQVGAAAEP 50
          GA   P PP  AG G  P P      P   P GGG  PA G   + A P
Sbjct: 10 GAGDGPLPPGGAGPGPGPGPGPGAGKPPSAPAGGGQLPAAGAARSTAVP 58


>gi|75750484 cardiomyopathy associated 4 isoform 2 [Homo sapiens]
          Length = 929

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 124 EAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKA 183
           +A+    Y + AAC L+ E  +Y +      + +     + KALYR   A  HLG  D+A
Sbjct: 39  KALLATLYRNRAACGLKTE--SYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQA 96

Query: 184 LYYLKEARTQQPTDTN 199
              ++   T +P + N
Sbjct: 97  FKDVQRCATLEPRNQN 112


>gi|27477061 cardiomyopathy associated 4 isoform 1 [Homo sapiens]
          Length = 931

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 124 EAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKA 183
           +A+    Y + AAC L+ E  +Y +      + +     + KALYR   A  HLG  D+A
Sbjct: 39  KALLATLYRNRAACGLKTE--SYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQA 96

Query: 184 LYYLKEARTQQPTDTN 199
              ++   T +P + N
Sbjct: 97  FKDVQRCATLEPRNQN 112


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.133    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,776,895
Number of Sequences: 37866
Number of extensions: 604332
Number of successful extensions: 5838
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 304
Number of HSP's that attempted gapping in prelim test: 4451
Number of HSP's gapped (non-prelim): 1715
length of query: 222
length of database: 18,247,518
effective HSP length: 98
effective length of query: 124
effective length of database: 14,536,650
effective search space: 1802544600
effective search space used: 1802544600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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